MGE detailed information
MGE type: Prophage MGE length: 31329 bp
Accession: NZ_CP030939 Location: 4368855..4400183 Organism: Escherichia coli strain AMSHJX01 Replicon: chromosome
Accession: NZ_CP030939 Location: 4368855..4400183 Organism: Escherichia coli strain AMSHJX01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DTO54_RS22990 () | 4366460..4367185 | - | 726 | WP_000066557.1 | type 1 fimbria chaperone FimC | - |
| DTO54_RS22995 () | 4367222..4367761 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| DTO54_RS23000 () | 4367826..4368374 | - | 549 | WP_000695561.1 | type 1 fimbrial major subunit FimA | - |
| DTO54_RS23010 () | 4368855..4369451 | - | 597 | WP_024232493.1 | Tyrosine recombinase XerC | VF |
| DTO54_RS23015 () | 4369929..4370531 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| DTO54_RS23030 () | 4371987..4372703 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| DTO54_RS23035 () | 4372723..4373829 | + | 1107 | WP_001044128.1 | N-acetylneuraminate epimerase | - |
| DTO54_RS23040 () | 4373894..4374874 | + | 981 | WP_001366032.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| DTO54_RS23045 () | 4374882..4375532 | - | 651 | WP_001037970.1 | HNH endonuclease | - |
| DTO54_RS23055 () | 4375911..4376096 | + | 186 | WP_000066585.1 | hypothetical protein | - |
| DTO54_RS23060 () | 4376176..4377081 | - | 906 | WP_000342496.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| DTO54_RS23065 () | 4377074..4377469 | - | 396 | WP_000152741.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| DTO54_RS23070 () | 4377539..4378372 | - | 834 | WP_001192742.1 | DUF4942 domain-containing protein | - |
| DTO54_RS23075 () | 4378678..4380234 | + | 1557 | WP_024232412.1 | type I restriction-modification system subunit M | - |
| DTO54_RS23080 () | 4380231..4381436 | + | 1206 | WP_001292892.1 | restriction endonuclease subunit S | - |
| DTO54_RS23085 () | 4381559..4384675 | + | 3117 | WP_000149678.1 | HsdR family type I site-specific deoxyribonuclease | - |
| DTO54_RS23090 () | 4385272..4387602 | - | 2331 | WP_000016229.1 | toprim domain-containing protein | - |
| DTO54_RS23095 () | 4387617..4387940 | - | 324 | WP_000842357.1 | DUF5375 family protein | - |
| DTO54_RS23100 () | 4387940..4388161 | - | 222 | WP_001014981.1 | hypothetical protein | - |
| DTO54_RS23105 () | 4388161..4388703 | - | 543 | WP_096998289.1 | host cell division inhibitor Icd-like protein | - |
| DTO54_RS23110 () | 4388703..4388963 | - | 261 | WP_000543726.1 | AlpA family transcriptional regulator | - |
| DTO54_RS23115 () | 4389876..4390628 | + | 753 | WP_000214378.1 | hypothetical protein | - |
| DTO54_RS23120 () | 4390625..4391179 | + | 555 | WP_094321097.1 | phage polarity suppression protein | - |
| DTO54_RS23125 () | 4391181..4391453 | + | 273 | WP_001185348.1 | ogr/Delta-like zinc finger family protein | - |
| DTO54_RS23130 () | 4392308..4395787 | + | 3480 | WP_096128719.1 | SIR2 family protein | - |
| DTO54_RS23135 () | 4395808..4397088 | - | 1281 | WP_042091307.1 | hypothetical protein ; Integrase | Integrase |
| DTO54_RS23145 () | 4397532..4398551 | + | 1020 | WP_001382682.1 | NADPH-dependent aldehyde reductase Ahr | - |
| DTO54_RS23150 () | 4398681..4400183 | + | 1503 | WP_024232413.1 | DUF853 domain-containing protein | - |
| DTO54_RS23155 () | 4400302..4401384 | - | 1083 | WP_001386017.1 | LPS export ABC transporter permease LptG | - |
| DTO54_RS23160 () | 4401384..4402484 | - | 1101 | WP_000584114.1 | LPS export ABC transporter permease LptF | - |
| DTO54_RS28265 () | 4402547..4402597 | - | 51 | WP_211180521.1 | protein YtgA | - |
| DTO54_RS23165 () | 4402751..4404262 | + | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| DTO54_RS23170 () | 4404396..4404839 | + | 444 | WP_000786399.1 | DNA polymerase III subunit chi | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|