MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 85578 bp
Accession: NZ_CP030912 Location: 5610710..5696287 Organism: Pseudomonas aeruginosa strain Y82 Replicon: chromosome
Accession: NZ_CP030912 Location: 5610710..5696287 Organism: Pseudomonas aeruginosa strain Y82 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Y82_RS27190 () | 5606282..5610481 | + | 4200 | WP_025298021.1 | two-partner secretion system exoprotein TpsA4 | - |
| Y82_RS27195 () | 5610851..5611717 | + | 867 | WP_003111785.1 | ParA family protein | - |
| Y82_RS27200 () | 5611719..5612456 | + | 738 | WP_003111784.1 | hypothetical protein | - |
| Y82_RS27205 () | 5612453..5612950 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| Y82_RS27210 () | 5612956..5613657 | + | 702 | WP_023443554.1 | DUF2786 domain-containing protein | - |
| Y82_RS27215 () | 5613654..5614382 | + | 729 | WP_003111781.1 | HNH endonuclease | - |
| Y82_RS27220 () | 5614366..5614590 | + | 225 | WP_003111780.1 | hypothetical protein | - |
| Y82_RS27225 () | 5614587..5615930 | + | 1344 | WP_010792218.1 | replicative DNA helicase | - |
| Y82_RS34655 () | 5616369..5616815 | - | 447 | WP_003117028.1 | hypothetical protein | - |
| Y82_RS27235 () | 5617750..5618187 | - | 438 | WP_003157043.1 | hypothetical protein | - |
| Y82_RS27240 () | 5618365..5618550 | + | 186 | WP_003157042.1 | hypothetical protein | - |
| Y82_RS27245 () | 5618540..5619067 | + | 528 | WP_003448815.1 | hypothetical protein | - |
| Y82_RS27250 () | 5619064..5619321 | + | 258 | WP_003448812.1 | hypothetical protein | - |
| Y82_RS34660 () | 5619314..5619553 | + | 240 | WP_023082652.1 | hypothetical protein | - |
| Y82_RS27255 () | 5619546..5619779 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| Y82_RS27260 () | 5619779..5620801 | + | 1023 | WP_010792224.1 | nucleoid-associated protein YejK | - |
| Y82_RS27265 () | 5620798..5621688 | + | 891 | WP_003119279.1 | DNA adenine methylase | - |
| Y82_RS27270 () | 5621709..5621978 | + | 270 | WP_003448782.1 | Arc family DNA-binding protein | - |
| Y82_RS27275 () | 5621975..5623708 | + | 1734 | WP_003448780.1 | ParB family protein | - |
| Y82_RS27280 () | 5623736..5624491 | + | 756 | WP_003121580.1 | DUF2857 domain-containing protein | - |
| Y82_RS27285 () | 5624494..5625819 | + | 1326 | WP_031675614.1 | hypothetical protein | - |
| Y82_RS27300 () | 5627043..5627678 | + | 636 | WP_079866755.1 | hypothetical protein | - |
| Y82_RS27310 () | 5627944..5628672 | + | 729 | WP_003448749.1 | TIGR03761 family integrating conjugative element protein | - |
| Y82_RS27315 () | 5628678..5629226 | + | 549 | WP_003120974.1 | DUF3158 family protein | - |
| Y82_RS27320 () | 5629274..5630104 | + | 831 | WP_003120975.1 | Rha family transcriptional regulator | - |
| Y82_RS27325 () | 5630134..5630622 | + | 489 | WP_010792225.1 | single-stranded DNA-binding protein | - |
| Y82_RS27330 () | 5630772..5631083 | + | 312 | WP_003461002.1 | helix-turn-helix domain-containing protein | - |
| Y82_RS34880 () | 5631034..5631357 | + | 324 | WP_170869300.1 | CrpP family protein | - |
| Y82_RS27340 () | 5631473..5633392 | + | 1920 | WP_003120981.1 | type I DNA topoisomerase | - |
| Y82_RS27345 () | 5633401..5634153 | + | 753 | WP_003120982.1 | hypothetical protein | - |
| Y82_RS27350 () | 5634265..5636154 | + | 1890 | WP_003448700.1 | hypothetical protein | - |
| Y82_RS27355 () | 5636151..5638127 | + | 1977 | WP_010792226.1 | DEAD/DEAH box helicase | - |
| Y82_RS27360 () | 5638268..5638612 | + | 345 | WP_003448665.1 | hypothetical protein | - |
| Y82_RS27365 () | 5638683..5638973 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| Y82_RS27370 () | 5638970..5639269 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| Y82_RS27375 () | 5639471..5640592 | + | 1122 | WP_003448658.1 | hypothetical protein | VF |
| Y82_RS27380 () | 5640592..5642301 | + | 1710 | WP_010792227.1 | Outer membrane lipoprotein BfpB | VF |
| Y82_RS27385 () | 5642305..5643630 | + | 1326 | WP_003120992.1 | type 4b pilus protein PilO2 | - |
| Y82_RS27390 () | 5643620..5644153 | + | 534 | WP_003120993.1 | type IV pilus biogenesis protein PilP | - |
| Y82_RS27395 () | 5644162..5645742 | + | 1581 | WP_003120994.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| Y82_RS27400 () | 5645742..5646821 | + | 1080 | WP_003123335.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| Y82_RS27405 () | 5646843..5647373 | + | 531 | WP_003120996.1 | pilus assembly protein PilX | - |
| Y82_RS27410 () | 5647370..5648326 | + | 957 | WP_003448639.1 | Twitching mobility protein | VF |
| Y82_RS27415 () | 5648319..5649698 | + | 1380 | WP_003099769.1 | hypothetical protein | VF |
| Y82_RS27420 () | 5649716..5650153 | + | 438 | WP_003120998.1 | hypothetical protein | VF |
| Y82_RS27430 () | 5651075..5651641 | + | 567 | WP_003120999.1 | hypothetical protein | - |
| Y82_RS27435 () | 5651718..5651897 | + | 180 | WP_004347955.1 | hypothetical protein | - |
| Y82_RS27440 () | 5652356..5652844 | + | 489 | WP_003448595.1 | DUF3577 domain-containing protein | - |
| Y82_RS34885 () | 5652982..5653140 | + | 159 | WP_003121002.1 | hypothetical protein | - |
| Y82_RS27445 () | 5653214..5653411 | + | 198 | WP_003448593.1 | hypothetical protein | - |
| Y82_RS27450 () | 5653603..5654316 | + | 714 | WP_003121003.1 | hypothetical protein | - |
| Y82_RS27455 () | 5654552..5654902 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| Y82_RS27460 () | 5654959..5655591 | + | 633 | WP_003099792.1 | DUF3275 family protein | - |
| Y82_RS27465 () | 5655588..5655863 | + | 276 | WP_003099794.1 | hypothetical protein | - |
| Y82_RS27470 () | 5655933..5656295 | + | 363 | WP_003099795.1 | hypothetical protein | - |
| Y82_RS27475 () | 5656363..5656623 | + | 261 | WP_003099797.1 | hypothetical protein | - |
| Y82_RS27480 () | 5656716..5657321 | + | 606 | WP_003099799.1 | hypothetical protein | - |
| Y82_RS27485 () | 5657351..5658712 | + | 1362 | WP_115747658.1 | class I SAM-dependent methyltransferase | - |
| Y82_RS27490 () | 5658817..5661066 | + | 2250 | WP_003099803.1 | DEAD/DEAH box helicase | - |
| Y82_RS27495 () | 5661387..5661641 | - | 255 | WP_003099808.1 | hypothetical protein | - |
| Y82_RS27510 () | 5662282..5662479 | - | 198 | WP_003099811.1 | hypothetical protein | - |
| Y82_RS27515 () | 5662697..5663389 | + | 693 | WP_003123350.1 | hypothetical protein | - |
| Y82_RS27520 () | 5663400..5664152 | + | 753 | WP_003121010.1 | TIGR03759 family integrating conjugative element protein | - |
| Y82_RS27525 () | 5664137..5664718 | + | 582 | WP_003121011.1 | hypothetical protein | VF |
| Y82_RS27530 () | 5664715..5665215 | + | 501 | WP_003121012.1 | integrating conjugative element protein | - |
| Y82_RS27535 () | 5665224..5665493 | + | 270 | WP_023082675.1 | hypothetical protein | - |
| Y82_RS27540 () | 5665497..5667728 | + | 2232 | WP_023082676.1 | type IV conjugative transfer system coupling protein TraD | - |
| Y82_RS27545 () | 5667728..5668474 | + | 747 | WP_009316301.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| Y82_RS27550 () | 5668492..5668983 | + | 492 | WP_023980742.1 | hypothetical protein | - |
| Y82_RS27555 () | 5669224..5670705 | + | 1482 | WP_012076865.1 | UvrD-helicase domain-containing protein | - |
| Y82_RS34665 () | 5670836..5671945 | + | 1110 | WP_023082058.1 | hypothetical protein | - |
| Y82_RS27565 () | 5671990..5672301 | - | 312 | WP_003117074.1 | DUF2845 domain-containing protein | - |
| Y82_RS27570 () | 5672474..5672773 | + | 300 | WP_003109393.1 | hypothetical protein | - |
| Y82_RS27575 () | 5672866..5673204 | + | 339 | WP_020751097.1 | RAQPRD family integrative conjugative element protein | - |
| Y82_RS27580 () | 5673201..5673440 | + | 240 | WP_023443559.1 | TIGR03758 family integrating conjugative element protein | - |
| Y82_RS27585 () | 5673458..5673814 | + | 357 | WP_003109398.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| Y82_RS27590 () | 5673825..5674211 | + | 387 | WP_003109399.1 | TIGR03750 family conjugal transfer protein | - |
| Y82_RS27595 () | 5674208..5674867 | + | 660 | WP_003109400.1 | TIGR03746 family integrating conjugative element protein | - |
| Y82_RS27600 () | 5674864..5675748 | + | 885 | WP_003109401.1 | TIGR03749 family integrating conjugative element protein | - |
| Y82_RS27605 () | 5675732..5677237 | + | 1506 | WP_020751098.1 | TIGR03752 family integrating conjugative element protein | - |
| Y82_RS27610 () | 5677215..5677658 | + | 444 | WP_020751099.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| Y82_RS27615 () | 5677658..5680600 | + | 2943 | WP_020751100.1 | conjugative transfer ATPase | - |
| Y82_RS27620 () | 5680597..5680881 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| Y82_RS27625 () | 5680878..5681537 | + | 660 | WP_003109405.1 | DsbA family protein | - |
| Y82_RS27630 () | 5681534..5681752 | - | 219 | WP_003109406.1 | hypothetical protein | - |
| Y82_RS27645 () | 5683889..5684320 | + | 432 | WP_003111736.1 | TIGR03757 family integrating conjugative element protein | - |
| Y82_RS27650 () | 5684320..5685258 | + | 939 | WP_003111735.1 | TIGR03756 family integrating conjugative element protein | - |
| Y82_RS27655 () | 5685276..5686658 | + | 1383 | WP_003111734.1 | integrating conjugative element protein | - |
| Y82_RS27660 () | 5686658..5687005 | + | 348 | WP_003111733.1 | hypothetical protein | - |
| Y82_RS27665 () | 5687002..5688534 | + | 1533 | WP_003111732.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| Y82_RS27670 () | 5688579..5688935 | - | 357 | WP_003111731.1 | hypothetical protein | - |
| Y82_RS27675 () | 5689054..5689326 | + | 273 | WP_003111730.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| Y82_RS27680 () | 5689330..5689683 | + | 354 | WP_003111729.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| Y82_RS27685 () | 5689710..5690624 | - | 915 | WP_003119431.1 | hypothetical protein | - |
| Y82_RS27690 () | 5690650..5690889 | - | 240 | WP_010792230.1 | hypothetical protein | - |
| Y82_RS27695 () | 5691273..5692523 | + | 1251 | WP_003119430.1 | IS256 family transposase ISRso7 | Transposase |
| Y82_RS27700 () | 5692683..5694605 | + | 1923 | WP_022580137.1 | helicase/relaxase domain-containing protein | - |
| Y82_RS27705 () | 5694602..5695903 | + | 1302 | WP_003454526.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| Y82_RS27715 () | 5696375..5697049 | - | 675 | WP_003111415.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| Y82_RS27720 () | 5697065..5697712 | - | 648 | WP_003111416.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| Y82_RS27725 () | 5697932..5698756 | - | 825 | WP_025297304.1 | tol-pal system protein YbgF | - |
| Y82_RS27730 () | 5698766..5699272 | - | 507 | WP_003111417.1 | peptidoglycan-associated lipoprotein Pal | - |
| Y82_RS27735 () | 5699325..5700623 | - | 1299 | WP_003086128.1 | Tol-Pal system protein TolB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|