MGE detailed information
MGE type: Genomic_island MGE length: 72548 bp
Accession: NZ_CP030912 Location: 1125462..1198009 Organism: Pseudomonas aeruginosa strain Y82 Replicon: chromosome
Accession: NZ_CP030912 Location: 1125462..1198009 Organism: Pseudomonas aeruginosa strain Y82 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Y82_RS05425 () | 1120779..1121348 | + | 570 | WP_003114324.1 | pseudouridine synthase | - |
| Y82_RS05430 () | 1121382..1121774 | - | 393 | WP_003093127.1 | globin | - |
| Y82_RS05435 () | 1121875..1122084 | - | 210 | WP_003093125.1 | DUF2788 domain-containing protein | - |
| Y82_RS05440 () | 1122286..1122795 | - | 510 | WP_003119210.1 | Lrp/AsnC family transcriptional regulator | - |
| Y82_RS05445 () | 1123243..1123926 | + | 684 | WP_003118264.1 | hypothetical protein | - |
| Y82_RS05450 () | 1123919..1124815 | - | 897 | WP_003093118.1 | CDF family cation-efflux transporter FieF | - |
| Y82_RS05455 () | 1124904..1125320 | - | 417 | WP_003093116.1 | hypothetical protein | - |
| Y82_RS05460 () | 1125462..1125917 | + | 456 | WP_023128597.1 | DEAD/DEAH box helicase | - |
| Y82_RS05465 () | 1125971..1128493 | + | 2523 | WP_015649536.1 | ATP-dependent helicase HrpB | - |
| Y82_RS05470 () | 1128815..1129267 | - | 453 | WP_015649535.1 | hypothetical protein | - |
| Y82_RS05475 () | 1129530..1130216 | - | 687 | WP_015649534.1 | helix-turn-helix domain-containing protein | - |
| Y82_RS05480 () | 1130511..1131167 | + | 657 | WP_015649533.1 | hypothetical protein | - |
| Y82_RS05485 () | 1131160..1132026 | + | 867 | WP_015649532.1 | ImmA/IrrE family metallo-endopeptidase | - |
| Y82_RS05490 () | 1132019..1133095 | + | 1077 | WP_015649531.1 | hypothetical protein | - |
| Y82_RS05495 () | 1133054..1133641 | - | 588 | WP_071534663.1 | sce7726 family protein | - |
| Y82_RS05500 () | 1133835..1134047 | + | 213 | WP_023128602.1 | hypothetical protein | - |
| Y82_RS05505 () | 1134138..1134593 | - | 456 | WP_025297646.1 | helix-turn-helix domain-containing protein | - |
| Y82_RS05510 () | 1134758..1135153 | + | 396 | WP_023128603.1 | hypothetical protein | - |
| Y82_RS05515 () | 1135196..1135666 | + | 471 | WP_023128604.1 | hypothetical protein | - |
| Y82_RS05520 () | 1135669..1136052 | + | 384 | WP_025297645.1 | hypothetical protein | - |
| Y82_RS05525 () | 1136134..1136712 | + | 579 | WP_025297644.1 | hypothetical protein | - |
| Y82_RS05530 () | 1137043..1137407 | + | 365 | Protein_1068 | DNA binding protein | - |
| Y82_RS05535 () | 1137631..1137825 | - | 195 | WP_023128607.1 | OprD family outer membrane porin | - |
| Y82_RS05540 () | 1137824..1138519 | + | 696 | WP_196747054.1 | transporter substrate-binding domain-containing protein | - |
| Y82_RS05545 () | 1138732..1139025 | - | 294 | WP_158025315.1 | type II toxin-antitoxin system RnlB family antitoxin | Antitoxin Detail |
| Y82_RS05550 () | 1139080..1140153 | - | 1074 | WP_025297643.1 | type II toxin-antitoxin system RnlA family toxin | Toxin Detail |
| Y82_RS05555 () | 1140868..1141122 | + | 255 | WP_023128610.1 | hypothetical protein | - |
| Y82_RS05565 () | 1141420..1141716 | + | 297 | WP_023128612.1 | hypothetical protein | - |
| Y82_RS05570 () | 1141769..1143352 | - | 1584 | WP_025297642.1 | hypothetical protein | - |
| Y82_RS05575 () | 1143632..1144060 | + | 429 | WP_025297641.1 | S24 family peptidase | - |
| Y82_RS05580 () | 1144444..1145670 | + | 1227 | WP_025297640.1 | CmlA/FloR family chloramphenicol efflux MFS transporter | - |
| Y82_RS05585 () | 1145849..1146259 | + | 411 | WP_079379916.1 | putative N-acetyltransferase YvbK | VF |
| Y82_RS05590 () | 1146415..1147185 | + | 771 | WP_050397054.1 | DUF4111 domain-containing protein | - |
| Y82_RS05595 () | 1147182..1147985 | + | 804 | WP_029771308.1 | APH(3'') family aminoglycoside O-phosphotransferase | - |
| Y82_RS05600 () | 1148017..1149309 | + | 1293 | WP_063879050.1 | hypothetical protein ; Integrase | Integrase |
| Y82_RS34445 () | 1149296..1151053 | + | 1758 | WP_054889621.1 | hypothetical protein | - |
| Y82_RS05605 () | 1151050..1153059 | + | 2010 | WP_033895284.1 | hypothetical protein ; Integrase | Integrase |
| Y82_RS05610 () | 1153031..1153456 | + | 426 | WP_025297803.1 | hypothetical protein | - |
| Y82_RS05615 () | 1153883..1154083 | + | 201 | WP_108703329.1 | hypothetical protein | - |
| Y82_RS05620 () | 1154221..1154511 | + | 291 | Protein_1086 | DNA polymerase V subunit UmuC | - |
| Y82_RS05625 () | 1154588..1155877 | + | 1290 | WP_025297805.1 | hypothetical protein ; Integrase | Integrase |
| Y82_RS05630 () | 1155870..1157600 | + | 1731 | WP_025297806.1 | hypothetical protein ; Integrase | Integrase |
| Y82_RS05635 () | 1158416..1159636 | + | 1221 | WP_046599150.1 | hypothetical protein | - |
| Y82_RS05640 () | 1159659..1160081 | + | 423 | WP_079379915.1 | hypothetical protein | - |
| Y82_RS05645 () | 1160149..1162839 | - | 2691 | WP_025297808.1 | AAA family ATPase | - |
| Y82_RS05650 () | 1163568..1165055 | + | 1488 | WP_003123389.1 | SulP family inorganic anion transporter | - |
| Y82_RS05655 () | 1165070..1165921 | + | 852 | WP_025297809.1 | universal stress protein | - |
| Y82_RS05660 () | 1166210..1167415 | + | 1206 | WP_025297810.1 | chromate efflux transporter | - |
| Y82_RS05665 () | 1167426..1167536 | + | 111 | Protein_1095 | PadR family transcriptional regulator | - |
| Y82_RS05670 () | 1167543..1168160 | + | 618 | WP_025297811.1 | class I SAM-dependent methyltransferase | - |
| Y82_RS05675 () | 1168492..1169459 | + | 968 | Protein_1097 | Y-family DNA polymerase | - |
| Y82_RS05680 () | 1169613..1169906 | + | 294 | WP_023128615.1 | hypothetical protein | - |
| Y82_RS05690 () | 1171437..1173584 | + | 2148 | WP_086230873.1 | ATP-dependent helicase HrpB | - |
| Y82_RS05695 () | 1173640..1175106 | + | 1467 | WP_003132541.1 | hypothetical protein ; Integrase | Integrase |
| Y82_RS05700 () | 1175103..1177031 | + | 1929 | WP_003132543.1 | hypothetical protein | - |
| Y82_RS05705 () | 1177028..1179076 | + | 2049 | WP_003132545.1 | hypothetical protein | - |
| Y82_RS05710 () | 1179079..1179507 | + | 429 | WP_010562495.1 | hypothetical protein | - |
| Y82_RS05715 () | 1179640..1179861 | - | 222 | WP_010562496.1 | helix-turn-helix domain-containing protein | - |
| Y82_RS05720 () | 1179966..1180544 | + | 579 | WP_003127304.1 | hypothetical protein | - |
| Y82_RS05725 () | 1180541..1181941 | + | 1401 | WP_003127305.1 | DEAD/DEAH box helicase family protein | - |
| Y82_RS05730 () | 1182032..1182334 | + | 303 | WP_003298444.1 | hypothetical protein | - |
| Y82_RS05735 () | 1182373..1182786 | + | 414 | Protein_1109 | hypothetical protein | - |
| Y82_RS05740 () | 1182888..1183073 | + | 186 | WP_115748819.1 | transposase | - |
| Y82_RS05745 () | 1183085..1184596 | - | 1512 | WP_023105887.1 | IS66 family transposase ISPsy43 | Transposase |
| Y82_RS05750 () | 1184660..1184956 | - | 297 | WP_196612410.1 | IS66 family transposase ISPpu30 | Transposase |
| Y82_RS05755 () | 1184992..1185327 | - | 336 | WP_023105889.1 | IS66 family transposase ISSal1 | Transposase |
| Y82_RS34725 () | 1185610..1185714 | + | 105 | Protein_1114 | IS66 family transposase ISSal1 | Transposase |
| Y82_RS05765 () | 1186004..1186309 | - | 306 | Protein_1115 | IS5 family transposase ISPst7 | Transposase |
| Y82_RS05770 () | 1186417..1187286 | - | 870 | WP_003127731.1 | HTH-type transcriptional activator CmpR | VF |
| Y82_RS05775 () | 1187280..1188290 | - | 1011 | WP_003127732.1 | phosphonate dehydrogenase PtxD | - |
| Y82_RS05780 () | 1188299..1189126 | - | 828 | WP_010466252.1 | phosphonate ABC transporter, permease protein PhnE | - |
| Y82_RS05785 () | 1189135..1189998 | - | 864 | WP_010562501.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| Y82_RS05790 () | 1189995..1190822 | - | 828 | WP_003118432.1 | Glutamine transport ATP-binding protein GlnQ | VF |
| Y82_RS05795 () | 1191165..1191675 | + | 511 | Protein_1121 | IS5 family transposase ISPre2 | Transposase |
| Y82_RS05800 () | 1192195..1193463 | + | 1269 | WP_010562502.1 | group II intron reverse transcriptase/maturase | - |
| Y82_RS34730 () | 1194195..1194368 | - | 174 | WP_016712140.1 | hypothetical protein | - |
| Y82_RS05810 () | 1195458..1197002 | - | 1545 | WP_003127475.1 | transcriptional regulator | - |
| Y82_RS05815 () | 1197083..1198009 | - | 927 | WP_010562503.1 | nucleotide-binding protein | - |
| Y82_RS05820 () | 1198447..1198854 | - | 408 | WP_003093113.1 | hypothetical protein | - |
| Y82_RS05825 () | 1198878..1199612 | - | 735 | WP_003159347.1 | hypothetical protein | - |
| Y82_RS05830 () | 1199702..1200841 | - | 1140 | WP_003106827.1 | endonuclease/exonuclease/phosphatase family protein | - |
| Y82_RS05835 () | 1200903..1201739 | + | 837 | WP_003106828.1 | SDR family oxidoreductase | - |
| Y82_RS05840 () | 1201746..1202180 | - | 435 | WP_003106829.1 | VOC family protein | - |
| Y82_RS05845 () | 1202247..1202903 | - | 657 | WP_003106831.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|