MGE detailed information
MGE type: Genomic_island MGE length: 18721 bp
Accession: NZ_CP030767 Location: 4977785..4996505 Organism: Escherichia coli strain 2017C-4109 Replicon: chromosome
Accession: NZ_CP030767 Location: 4977785..4996505 Organism: Escherichia coli strain 2017C-4109 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSB73_RS26645 () | 4972924..4974102 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| DSB73_RS26650 () | 4974170..4975012 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| DSB73_RS26655 () | 4975278..4977473 | - | 2196 | WP_000535070.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| DSB73_RS26660 () | 4977785..4978051 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| DSB73_RS26665 () | 4978048..4978815 | - | 768 | WP_000222489.1 | hypothetical protein | - |
| DSB73_RS26670 () | 4978825..4979976 | - | 1152 | WP_001301805.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| DSB73_RS26675 () | 4980092..4981363 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| DSB73_RS26680 () | 4981404..4982636 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| DSB73_RS26690 () | 4983103..4983855 | + | 753 | Protein_4794 | hypothetical protein | VF |
| DSB73_RS29055 () | 4983860..4984060 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| DSB73_RS26695 () | 4984303..4985715 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| DSB73_RS26705 () | 4985892..4986056 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| DSB73_RS26710 () | 4986153..4987034 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| DSB73_RS26715 () | 4987082..4988245 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| DSB73_RS26720 () | 4988292..4988633 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - () | 4988628..4988704 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4988628..4988704 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4988628..4988704 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4988628..4988704 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4988628..4988704 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4988628..4988704 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4988628..4988704 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4988628..4988704 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| DSB73_RS26725 () | 4988854..4990608 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| DSB73_RS26730 () | 4990608..4992077 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| DSB73_RS26735 () | 4992144..4994576 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| DSB73_RS26740 () | 4994854..4995138 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| DSB73_RS26745 () | 4995147..4996505 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| DSB73_RS26750 () | 4996574..4997530 | - | 957 | WP_001297640.1 | GTPase | - |
| DSB73_RS26755 () | 4997541..4997744 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| DSB73_RS26760 () | 4997794..4999944 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| DSB73_RS26770 () | 5000237..5000779 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |