MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 152944 bp
Accession: NZ_CP030276 Location: 1..152944 Organism: Rhodobacter sphaeroides 2.4.1 Replicon: plasmid pDE
Accession: NZ_CP030276 Location: 1..152944 Organism: Rhodobacter sphaeroides 2.4.1 Replicon: plasmid pDE
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL45_RS22055 () | 1723..2157 | + | 435 | WP_017140544.1 | conjugal transfer protein TraF | - |
| DQL45_RS22060 () | 2150..2983 | + | 834 | WP_011331486.1 | conjugal transfer protein TraF | - |
| DQL45_RS22065 () | 2991..3236 | + | 246 | WP_011331487.1 | hypothetical protein | - |
| DQL45_RS22070 () | 3256..4644 | + | 1389 | WP_017140543.1 | conjugal transfer protein TraH | - |
| DQL45_RS22075 () | 4648..8067 | + | 3420 | WP_017208420.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| DQL45_RS22080 () | 8497..8775 | - | 279 | WP_017140568.1 | hypothetical protein | - |
| DQL45_RS22085 () | 8738..9028 | - | 291 | WP_011836217.1 | BrnT family toxin | - |
| DQL45_RS22090 () | 9196..9879 | - | 684 | WP_147176061.1 | IS110 family transposase ISMav6 | Transposase |
| DQL45_RS22095 () | 10748..10890 | - | 143 | Protein_9 | IS3 family transposase ISAfe5 | Transposase |
| DQL45_RS22100 () | 11070..12272 | - | 1203 | WP_011836218.1 | restriction endonuclease | - |
| DQL45_RS22105 () | 12806..12979 | - | 174 | WP_080588245.1 | hypothetical protein | - |
| DQL45_RS22115 () | 13314..13715 | - | 402 | WP_011836220.1 | hypothetical protein | - |
| DQL45_RS22120 () | 13708..14265 | - | 558 | WP_011836221.1 | DUF2726 domain-containing protein | - |
| DQL45_RS22125 () | 14267..14758 | - | 492 | WP_011836222.1 | hypothetical protein | - |
| DQL45_RS22130 () | 14798..15619 | - | 822 | WP_011836223.1 | DsbA family protein | - |
| DQL45_RS22135 () | 15779..18061 | + | 2283 | WP_011836224.1 | type IV secretion system DNA-binding domain-containing protein | - |
| DQL45_RS22140 () | 18061..21392 | + | 3332 | Protein_17 | Multifunctional conjugation protein TraI | Relaxase |
| DQL45_RS22145 () | 21389..22021 | + | 633 | WP_011836226.1 | hypothetical protein | - |
| DQL45_RS22150 () | 22194..23030 | + | 837 | WP_061350899.1 | hypothetical protein | - |
| DQL45_RS22155 () | 23500..24348 | + | 849 | WP_017140561.1 | Protein virC1 | VF |
| DQL45_RS23090 () | 24600..24905 | + | 306 | WP_017140560.1 | hypothetical protein | - |
| DQL45_RS22165 () | 26775..27638 | - | 864 | WP_011836229.1 | DUF945 domain-containing protein | - |
| DQL45_RS23310 () | 28707..28865 | + | 159 | WP_017140559.1 | hypothetical protein | - |
| DQL45_RS22180 () | 28935..29201 | - | 267 | WP_017208432.1 | hypothetical protein | - |
| DQL45_RS22185 () | 29718..30266 | - | 549 | WP_017140556.1 | hypothetical protein | - |
| DQL45_RS22190 () | 30607..31824 | - | 1218 | WP_017140555.1 | hypothetical protein | - |
| DQL45_RS23095 () | 32274..32594 | + | 321 | WP_017140547.1 | hypothetical protein | - |
| DQL45_RS22200 () | 33385..33711 | + | 327 | WP_017140546.1 | hypothetical protein | - |
| DQL45_RS22205 () | 33840..34190 | + | 351 | WP_011331471.1 | hypothetical protein | - |
| DQL45_RS22210 () | 34257..34547 | + | 291 | WP_011331472.1 | type IV conjugative transfer system protein TraL | - |
| DQL45_RS22215 () | 34535..35101 | + | 567 | WP_017140545.1 | type IV conjugative transfer system protein TraE | - |
| DQL45_RS22220 () | 35098..35817 | + | 720 | WP_011331474.1 | type-F conjugative transfer system secretin TraK | - |
| DQL45_RS22225 () | 35817..37070 | + | 1254 | WP_011331475.1 | TraB/VirB10 family protein | - |
| DQL45_RS22230 () | 37067..37495 | + | 429 | WP_011331476.1 | TraV family lipoprotein | - |
| DQL45_RS22235 () | 37492..39975 | + | 2484 | WP_011331477.1 | TraC family protein | - |
| DQL45_RS22240 () | 39972..40289 | + | 318 | WP_011331478.1 | hypothetical protein | - |
| DQL45_RS22245 () | 40267..40626 | + | 360 | WP_011331479.1 | TrbI F-type domain-containing protein | - |
| DQL45_RS22250 () | 40623..41153 | + | 531 | WP_011331480.1 | S26 family signal peptidase | - |
| DQL45_RS22255 () | 41129..41767 | + | 639 | WP_011331481.1 | hypothetical protein | - |
| DQL45_RS22260 () | 41764..42750 | + | 987 | WP_011331482.1 | TraU family protein | - |
| DQL45_RS22265 () | 42711..43463 | + | 753 | WP_011331483.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| DQL45_RS22270 () | 43460..45568 | + | 2109 | WP_011331484.1 | conjugal transfer protein TraN | - |
| DQL45_RS22275 () | 45534..45968 | + | 435 | WP_017140544.1 | conjugal transfer protein TraF | - |
| DQL45_RS22280 () | 45961..46794 | + | 834 | WP_011331486.1 | conjugal transfer protein TraF | - |
| DQL45_RS22285 () | 46802..47047 | + | 246 | WP_011331487.1 | hypothetical protein | - |
| DQL45_RS22290 () | 47067..48455 | + | 1389 | WP_017140543.1 | conjugal transfer protein TraH | - |
| DQL45_RS22295 () | 48459..51869 | + | 3411 | WP_011331489.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| DQL45_RS23100 () | 51877..52209 | - | 333 | WP_147176093.1 | hypothetical protein | - |
| DQL45_RS22300 () | 52710..53132 | + | 423 | WP_160384180.1 | GNAT family N-acetyltransferase | - |
| DQL45_RS22305 () | 53195..53665 | + | 471 | WP_023003467.1 | hypothetical protein | - |
| DQL45_RS22310 () | 53691..58325 | + | 4635 | WP_011331491.1 | Bifunctional hemolysin/adenylate cyclase | VF |
| DQL45_RS22315 () | 58510..58794 | - | 285 | WP_023003468.1 | helix-turn-helix domain-containing protein | - |
| DQL45_RS22320 () | 58760..59032 | - | 273 | WP_002724939.1 | BrnT family toxin | - |
| DQL45_RS23105 () | 59211..59642 | + | 432 | WP_147176042.1 | hypothetical protein | - |
| DQL45_RS22325 () | 59899..60684 | - | 786 | WP_011331492.1 | ImmA/IrrE family metallo-endopeptidase | - |
| DQL45_RS22330 () | 60684..61043 | - | 360 | WP_017208431.1 | hypothetical protein | - |
| DQL45_RS22335 () | 61109..61699 | - | 591 | WP_017140550.1 | hypothetical protein | - |
| DQL45_RS22340 () | 61831..62109 | + | 279 | WP_011331494.1 | hypothetical protein | - |
| DQL45_RS22345 () | 62214..63455 | + | 1242 | WP_011331495.1 | nucleotidyltransferase | - |
| DQL45_RS22350 () | 63452..63934 | + | 483 | WP_011331496.1 | hypothetical protein | - |
| DQL45_RS22355 () | 63915..65105 | + | 1191 | WP_011331497.1 | SAVED domain-containing protein | - |
| DQL45_RS22360 () | 65328..65501 | - | 174 | WP_017140549.1 | hypothetical protein | - |
| DQL45_RS22370 () | 65842..66399 | - | 558 | WP_011836221.1 | DUF2726 domain-containing protein | - |
| DQL45_RS22375 () | 66401..66892 | - | 492 | WP_011836222.1 | hypothetical protein | - |
| DQL45_RS22380 () | 67030..68406 | + | 1377 | WP_011339201.1 | ISNCY family transposase ISRel26 | Transposase |
| DQL45_RS22385 () | 68537..69364 | - | 828 | WP_017208421.1 | DsbA family protein | - |
| DQL45_RS22390 () | 69524..71807 | + | 2284 | Protein_67 | type IV secretion system DNA-binding domain-containing protein | - |
| DQL45_RS22395 () | 71807..75139 | + | 3333 | WP_162129773.1 | Multifunctional conjugation protein TraI | Relaxase |
| DQL45_RS22400 () | 75136..75768 | + | 633 | WP_011836226.1 | hypothetical protein | - |
| DQL45_RS22405 () | 75941..76777 | + | 837 | WP_017140540.1 | hypothetical protein | - |
| DQL45_RS23110 () | 76832..77629 | - | 798 | WP_155731657.1 | hypothetical protein | - |
| DQL45_RS22410 () | 78932..79657 | + | 726 | WP_011331416.1 | Chromosome partitioning protein ParA | VF |
| DQL45_RS22415 () | 79654..80280 | + | 627 | WP_020477363.1 | hypothetical protein | - |
| DQL45_RS22420 () | 80344..80595 | - | 252 | WP_017140537.1 | hypothetical protein | - |
| DQL45_RS22425 () | 80750..80947 | + | 198 | WP_017140536.1 | hypothetical protein | - |
| DQL45_RS22430 () | 80993..81184 | - | 192 | WP_017140535.1 | hypothetical protein | - |
| DQL45_RS22445 () | 82241..82399 | + | 159 | WP_023003456.1 | hypothetical protein | - |
| DQL45_RS22450 () | 82976..83647 | + | 672 | WP_011331417.1 | SOS response-associated peptidase | - |
| DQL45_RS22455 () | 83710..83922 | + | 213 | WP_017140533.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| DQL45_RS22460 () | 83922..84335 | + | 414 | WP_011331418.1 | type II toxin-antitoxin system VapC family toxin | - |
| DQL45_RS22470 () | 84928..85281 | - | 354 | WP_017140531.1 | hypothetical protein | - |
| DQL45_RS22475 () | 85278..86675 | - | 1398 | WP_017140530.1 | DUF4942 domain-containing protein | - |
| DQL45_RS22480 () | 86774..87169 | - | 396 | WP_011331421.1 | DUF3768 domain-containing protein | - |
| DQL45_RS22485 () | 87670..88152 | + | 483 | WP_160384187.1 | plasmid pRiA4b ORF-3 family protein | - |
| DQL45_RS22490 () | 88195..88536 | + | 342 | Protein_85 | IS66 family transposase ISRel24 | Transposase |
| DQL45_RS22495 () | 88619..89269 | - | 651 | WP_011331424.1 | LysE family translocator | - |
| DQL45_RS22500 () | 89276..90367 | - | 1092 | WP_011331425.1 | DUF2332 domain-containing protein | - |
| DQL45_RS22505 () | 90586..90717 | - | 132 | Protein_88 | IS3 family transposase | - |
| DQL45_RS23115 () | 90774..91602 | - | 829 | Protein_89 | IS66 family transposase ISApr6 | Transposase |
| DQL45_RS22520 () | 91651..91941 | - | 291 | WP_011331427.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| DQL45_RS22525 () | 92283..93353 | + | 1071 | WP_011331428.1 | radical SAM protein | - |
| DQL45_RS22530 () | 93487..94413 | + | 927 | WP_011331429.1 | methyltransferase domain-containing protein | - |
| DQL45_RS22535 () | 94488..95498 | + | 1011 | WP_011331430.1 | isopropylmalate/homocitrate synthase | - |
| DQL45_RS22540 () | 95573..95941 | + | 369 | WP_011331431.1 | hypothetical protein | - |
| DQL45_RS22545 () | 95934..97256 | + | 1323 | WP_011331432.1 | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | - |
| DQL45_RS22550 () | 97265..98068 | + | 804 | WP_017140525.1 | hypothetical protein | - |
| DQL45_RS22555 () | 98269..99840 | + | 1572 | WP_017140524.1 | asparagine synthase | - |
| DQL45_RS22560 () | 99903..100034 | + | 132 | Protein_98 | IS3 family transposase ISRde3 | Transposase |
| DQL45_RS22565 () | 100102..101673 | - | 1572 | WP_011331435.1 | IS66 family transposase ISRhsp5 | Transposase |
| DQL45_RS22570 () | 101742..102095 | - | 354 | WP_011331436.1 | IS66 family transposase ISRhsp5 | Transposase |
| DQL45_RS22575 () | 102092..102391 | - | 300 | WP_017208427.1 | IS66 family transposase ISRhsp5 | Transposase |
| DQL45_RS22585 () | 102757..103050 | - | 294 | Protein_102 | IS66 family transposase ISXau4 | Transposase |
| DQL45_RS22590 () | 103062..103235 | - | 174 | Protein_103 | transposase | - |
| DQL45_RS22595 () | 103321..103530 | + | 210 | Protein_104 | transposase | - |
| DQL45_RS22600 () | 103899..104726 | + | 828 | WP_011331438.1 | hypothetical protein | - |
| DQL45_RS22605 () | 104769..105146 | - | 378 | WP_011331439.1 | hypothetical protein | - |
| DQL45_RS22610 () | 105146..105574 | - | 429 | WP_023003461.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| DQL45_RS23120 () | 106529..106939 | + | 411 | WP_017140520.1 | hypothetical protein | - |
| DQL45_RS22620 () | 107467..107872 | + | 406 | Protein_109 | transposase | - |
| DQL45_RS23130 () | 107992..108174 | + | 183 | WP_017140518.1 | IS66 family transposase IS866 | Transposase |
| DQL45_RS22630 () | 108286..109859 | + | 1574 | Protein_111 | IS66 family transposase ISPpa7 | Transposase |
| DQL45_RS22635 () | 110379..111590 | - | 1212 | WP_011331443.1 | replication initiation protein RepC | - |
| DQL45_RS22640 () | 111773..112759 | - | 987 | WP_011331444.1 | plasmid partitioning protein RepB | - |
| DQL45_RS22645 () | 112759..113943 | - | 1185 | WP_011331445.1 | Sporulation initiation inhibitor protein Soj | VF |
| DQL45_RS22650 () | 114158..114385 | + | 228 | WP_011331446.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| DQL45_RS22655 () | 114375..114770 | + | 396 | WP_011331447.1 | PIN domain-containing protein | Toxin Detail |
| DQL45_RS22660 () | 114850..115734 | - | 885 | WP_061350894.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| DQL45_RS22665 () | 116447..117040 | + | 594 | WP_011331449.1 | biliverdin-producing heme oxygenase | - |
| DQL45_RS22670 () | 117108..119903 | + | 2796 | WP_061350895.1 | Phytochrome-like protein cph2 | VF |
| DQL45_RS22675 () | 120084..120203 | - | 120 | Protein_120 | IS3 family transposase ISPmar2 | Transposase |
| DQL45_RS22680 () | 120365..120919 | + | 555 | WP_011331451.1 | hypothetical protein | - |
| DQL45_RS22685 () | 120919..121953 | + | 1035 | WP_011331452.1 | ATP-binding protein | - |
| DQL45_RS22690 () | 121950..122414 | + | 465 | WP_011331453.1 | response regulator | - |
| DQL45_RS22695 () | 122719..122957 | + | 239 | Protein_124 | transposase | - |
| DQL45_RS22700 () | 123424..124914 | + | 1491 | WP_011331455.1 | SulP family inorganic anion transporter | - |
| DQL45_RS22705 () | 124926..125774 | + | 849 | WP_017140509.1 | universal stress protein | - |
| DQL45_RS22710 () | 125781..126116 | + | 336 | WP_011331456.1 | TraR/DksA C4-type zinc finger protein | - |
| DQL45_RS22715 () | 126148..127398 | + | 1251 | WP_011331457.1 | MFS transporter | - |
| DQL45_RS22720 () | 127569..127853 | + | 285 | WP_011331458.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| DQL45_RS22725 () | 127850..128908 | + | 1059 | WP_011331459.1 | permease | - |
| DQL45_RS22730 () | 128921..129151 | + | 231 | WP_011331460.1 | thioredoxin family protein | - |
| DQL45_RS22735 () | 129148..129465 | + | 318 | WP_011331461.1 | hypothetical protein | - |
| DQL45_RS22740 () | 129683..130144 | + | 462 | WP_080588249.1 | hypothetical protein | - |
| DQL45_RS22745 () | 130777..131904 | + | 1128 | WP_061350897.1 | D-inositol 3-phosphate glycosyltransferase | VF |
| DQL45_RS23315 () | 131976..132131 | - | 156 | WP_011331463.1 | hypothetical protein | - |
| DQL45_RS22750 () | 132369..133538 | - | 1170 | WP_050988691.1 | acyltransferase | - |
| DQL45_RS22755 () | 133957..134769 | + | 813 | WP_011331465.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| DQL45_RS22760 () | 134769..135776 | + | 1008 | WP_011331466.1 | ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase | - |
| DQL45_RS22765 () | 135820..137058 | + | 1239 | WP_011331467.1 | organoarsenical effux MFS transporter ArsJ | - |
| DQL45_RS22770 () | 137465..137716 | - | 252 | Protein_140 | IS66 family transposase ISRel24 | Transposase |
| DQL45_RS22775 () | 137975..138319 | + | 345 | Protein_141 | IS110 family transposase ISAtu7 | Transposase |
| DQL45_RS22780 () | 138321..138764 | - | 444 | Protein_142 | transposase | - |
| DQL45_RS22785 () | 138822..139475 | - | 654 | Protein_143 | IS3 family transposase ISPam3 | Transposase |
| DQL45_RS22790 () | 139764..140981 | - | 1218 | WP_011331470.1 | transposase | - |
| DQL45_RS23135 () | 141147..141674 | - | 528 | WP_160384182.1 | hypothetical protein | - |
| DQL45_RS22800 () | 142528..142854 | + | 327 | WP_017140546.1 | hypothetical protein | - |
| DQL45_RS22805 () | 142983..143333 | + | 351 | WP_011331471.1 | hypothetical protein | - |
| DQL45_RS22810 () | 143400..143690 | + | 291 | WP_011331472.1 | type IV conjugative transfer system protein TraL | - |
| DQL45_RS22815 () | 143678..144244 | + | 567 | WP_017140545.1 | type IV conjugative transfer system protein TraE | - |
| DQL45_RS22820 () | 144241..144960 | + | 720 | WP_011331474.1 | type-F conjugative transfer system secretin TraK | - |
| DQL45_RS22825 () | 144960..146213 | + | 1254 | WP_011331475.1 | TraB/VirB10 family protein | - |
| DQL45_RS22830 () | 146210..146638 | + | 429 | WP_011331476.1 | TraV family lipoprotein | - |
| DQL45_RS22835 () | 146635..149118 | + | 2484 | WP_011331477.1 | TraC family protein | - |
| DQL45_RS22840 () | 149115..149432 | + | 318 | WP_011331478.1 | hypothetical protein | - |
| DQL45_RS22845 () | 149410..149769 | + | 360 | WP_011331479.1 | TrbI F-type domain-containing protein | - |
| DQL45_RS22850 () | 149766..150296 | + | 531 | WP_011331480.1 | S26 family signal peptidase | - |
| DQL45_RS22855 () | 150272..150910 | + | 639 | WP_011331481.1 | hypothetical protein | - |
| DQL45_RS22860 () | 150907..151167 | + | 261 | WP_114071706.1 | TraU family protein | - |
| DQL45_RS22865 () | 151080..151892 | + | 813 | Protein_159 | TraU family protein | - |
| DQL45_RS23350 () | 151814..152596 | + | 783 | Protein_160 | type-F conjugative transfer system pilin assembly protein TrbC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|