MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 102921 bp
Accession: NZ_CP030000 Location: 1..102921 Organism: Salmonella enterica subsp. enterica serovar Brandenburg strain SA20113174 Replicon: plasmid pSA20113174.1
Accession: NZ_CP030000 Location: 1..102921 Organism: Salmonella enterica subsp. enterica serovar Brandenburg strain SA20113174 Replicon: plasmid pSA20113174.1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DOE62_RS24395 () | 46..1077 | + | 1032 | WP_000907873.1 | replication initiation protein | - |
| DOE62_RS24410 () | 1986..2255 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| DOE62_RS24415 () | 2252..2533 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DOE62_RS24420 () | 2573..3421 | + | 849 | WP_001057992.1 | 3'-5' exonuclease | - |
| DOE62_RS24425 () | 3538..4011 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| DOE62_RS24435 () | 4488..4754 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| DOE62_RS24440 () | 4754..5248 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| DOE62_RS24445 () | 5304..5906 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| DOE62_RS24455 () | 6260..7144 | + | 885 | Protein_8 | hypothetical protein | - |
| DOE62_RS24460 () | 7327..8589 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| DOE62_RS24465 () | 8913..10058 | + | 1146 | WP_000976514.1 | class C beta-lactamase CMY-2 | - |
| DOE62_RS24470 () | 10152..10685 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| DOE62_RS24475 () | 10682..10999 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| DOE62_RS24480 () | 11051..11521 | + | 471 | Protein_13 | hypothetical protein | - |
| DOE62_RS24485 () | 11800..13680 | + | 1881 | WP_001283341.1 | colicin 1B | - |
| DOE62_RS24490 () | 13698..14045 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| DOE62_RS24495 () | 14164..14511 | + | 348 | WP_000142436.1 | hypothetical protein | - |
| DOE62_RS24500 () | 14529..15119 | - | 591 | WP_000194550.1 | hypothetical protein | - |
| DOE62_RS24505 () | 15119..15373 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| DOE62_RS24510 () | 15725..16726 | + | 1002 | WP_000774875.1 | DUF4238 domain-containing protein | - |
| DOE62_RS24515 () | 16902..17246 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| DOE62_RS24520 () | 17745..17999 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| DOE62_RS24525 () | 18044..18970 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| DOE62_RS24535 () | 19528..19746 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DOE62_RS24540 () | 19748..20053 | + | 306 | WP_001159869.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DOE62_RS24545 () | 20054..20860 | + | 807 | WP_000016969.1 | site-specific integrase | - |
| DOE62_RS24550 () | 21040..21684 | + | 645 | WP_001144036.1 | ParA family protein | - |
| DOE62_RS24555 () | 21771..22079 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| DOE62_RS24560 () | 22493..23473 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| DOE62_RS24565 () | 23466..23882 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| DOE62_RS24570 () | 23884..25158 | - | 1275 | WP_000457493.1 | Y-family DNA polymerase | - |
| DOE62_RS24575 () | 25158..25595 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DOE62_RS24580 () | 25592..25840 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| DOE62_RS24590 () | 26258..27160 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| DOE62_RS24595 () | 27157..27468 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| DOE62_RS24600 () | 27545..28228 | + | 684 | WP_000086178.1 | DNA methylase | - |
| DOE62_RS24605 () | 28229..28450 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| DOE62_RS24610 () | 28462..28896 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| DOE62_RS25245 () | 28947..29717 | + | 771 | WP_024133193.1 | hypothetical protein | - |
| DOE62_RS24625 () | 30135..30560 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| DOE62_RS24630 () | 30607..31029 | + | 423 | WP_000271744.1 | DUF1380 family protein | - |
| DOE62_RS24635 () | 31026..31217 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| DOE62_RS25410 () | 31550..31618 | - | 69 | Protein_42 | pilus protein | - |
| DOE62_RS24650 () | 31987..32514 | + | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| DOE62_RS24655 () | 32572..32805 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| DOE62_RS24660 () | 32864..34822 | + | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| DOE62_RS24665 () | 34877..35311 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| DOE62_RS24670 () | 35308..36027 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| DOE62_RS24675 () | 36320..37861 | + | 1542 | WP_001298859.1 | IS21-like element ISEc12 family transposase | - |
| DOE62_RS24680 () | 37876..38622 | + | 747 | WP_001016257.1 | IS21-like element ISEc12 family helper ATPase IstB | - |
| DOE62_RS24685 () | 38743..39918 | + | 1176 | WP_000942657.1 | transposase | - |
| DOE62_RS25415 () | 40365..40865 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| DOE62_RS24705 () | 41594..42028 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| DOE62_RS24710 () | 42122..42388 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| DOE62_RS24715 () | 42453..43355 | + | 903 | WP_000038404.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| DOE62_RS24720 () | 43355..43636 | + | 282 | WP_001334682.1 | hypothetical protein | - |
| DOE62_RS24725 () | 43667..43918 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| DOE62_RS24735 () | 44499..45347 | + | 849 | WP_001077027.1 | DUF4942 domain-containing protein | - |
| DOE62_RS24740 () | 45433..45768 | - | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| DOE62_RS24745 () | 46002..46334 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| DOE62_RS24750 () | 46345..49044 | + | 2700 | WP_001474686.1 | IncI1-type relaxase NikB | - |
| DOE62_RS24755 () | 49081..51372 | - | 2292 | WP_001289271.1 | hypothetical protein | - |
| DOE62_RS24760 () | 51365..52435 | - | 1071 | WP_000151575.1 | IncI1-type conjugal transfer protein TrbB | - |
| DOE62_RS24765 () | 52454..53662 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| DOE62_RS24770 () | 53954..54106 | + | 153 | WP_001303307.1 | Hok/Gef family protein | - |
| DOE62_RS24775 () | 54178..54429 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| DOE62_RS24780 () | 54790..55569 | - | 780 | WP_001323403.1 | IS21-like element IS100kyp family helper ATPase IstB | - |
| DOE62_RS24785 () | 55569..56591 | - | 1023 | WP_001572805.1 | IS21-like element IS100 family transposase | - |
| DOE62_RS25420 () | 57312..57488 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| DOE62_RS24800 () | 57880..58089 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| DOE62_RS24805 () | 58161..58823 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| DOE62_RS24810 () | 58894..61062 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| DOE62_RS24815 () | 61159..61743 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| DOE62_RS24820 () | 61772..62974 | - | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| DOE62_RS24825 () | 62941..63555 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| DOE62_RS24830 () | 63555..66599 | - | 3045 | WP_001024751.1 | IncI1-type conjugal transfer protein TraU | - |
| DOE62_RS24835 () | 66689..67489 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| DOE62_RS24840 () | 67473..67661 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| DOE62_RS24845 () | 67725..68129 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| DOE62_RS24850 () | 68180..68707 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| DOE62_RS24855 () | 68707..69411 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| DOE62_RS24860 () | 69411..70700 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| DOE62_RS24865 () | 70703..71686 | - | 984 | WP_001191878.1 | IncI1-type conjugal transfer protein TraN | - |
| DOE62_RS24870 () | 71697..72389 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| DOE62_RS24875 () | 72386..72733 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| DOE62_RS24880 () | 72751..76518 | - | 3768 | WP_001141535.1 | hypothetical protein | - |
| DOE62_RS24885 () | 76608..77159 | - | 552 | WP_000014584.1 | phospholipase D family protein | - |
| DOE62_RS24890 () | 77174..77464 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| DOE62_RS24895 () | 77461..78609 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| DOE62_RS24900 () | 78606..79424 | - | 819 | WP_000646097.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| DOE62_RS24905 () | 79421..79879 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| DOE62_RS24910 () | 80274..80858 | - | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| DOE62_RS24915 () | 80918..82120 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| DOE62_RS24920 () | 82206..83030 | - | 825 | WP_001238927.1 | hypothetical protein | - |
| DOE62_RS24925 () | 83181..84335 | - | 1155 | WP_001139958.1 | integrase | - |
| DOE62_RS24940 () | 84945..85142 | + | 198 | WP_032159596.1 | hypothetical protein | - |
| DOE62_RS24945 () | 85139..86563 | - | 1425 | WP_023278060.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| DOE62_RS24950 () | 86563..87219 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| DOE62_RS24955 () | 87204..87764 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| DOE62_RS24960 () | 87774..88388 | - | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| DOE62_RS24965 () | 88406..89503 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| DOE62_RS24970 () | 89516..91069 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| DOE62_RS24975 () | 91080..91532 | - | 453 | WP_001247336.1 | type IV pilus biogenesis protein PilP | - |
| DOE62_RS24980 () | 91519..92814 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| DOE62_RS24985 () | 92807..94489 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| DOE62_RS24990 () | 94503..94940 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| DOE62_RS24995 () | 94940..96007 | - | 1068 | WP_000742600.1 | type IV pilus biogenesis lipoprotein PilL | - |
| DOE62_RS25000 () | 96162..97390 | + | 1229 | WP_088895425.1 | IS3-like element IS2 family transposase | - |
| DOE62_RS25010 () | 98017..98469 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| DOE62_RS25015 () | 98512..98766 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| DOE62_RS25020 () | 99034..99600 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| DOE62_RS25025 () | 99614..100297 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| DOE62_RS25035 () | 100551..101084 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| DOE62_RS25045 () | 101526..101813 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| DOE62_RS25050 () | 101731..101994 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|