MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 91848 bp
Accession: NZ_CP029912 Location: 1..91848 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 343076_249107 Replicon: plasmid pK91
Accession: NZ_CP029912 Location: 1..91848 Organism: Salmonella enterica subsp. enterica serovar Typhi strain 343076_249107 Replicon: plasmid pK91
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM249107_RS00005 () | 1..246 | + | 246 | Protein_0 | IS3 family transposase | - |
| SM249107_RS00015 () | 919..2427 | + | 1509 | WP_004017889.1 | group II intron reverse transcriptase/maturase | - |
| SM249107_RS00020 () | 2508..2687 | + | 180 | Protein_2 | DDE-type integrase/transposase/recombinase | - |
| SM249107_RS00030 () | 2969..4045 | + | 1077 | WP_000227969.1 | IS110 family transposase | - |
| SM249107_RS00035 () | 4062..4340 | + | 279 | Protein_4 | IS3 family transposase | - |
| SM249107_RS00040 () | 4448..6493 | - | 2046 | WP_048659818.1 | protease Lon-related BREX system protein BrxL | - |
| SM249107_RS00045 () | 6555..9212 | - | 2658 | WP_004011547.1 | BREX-1 system phosphatase PglZ type A | - |
| SM249107_RS00050 () | 9212..12841 | - | 3630 | WP_021546937.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| SM249107_RS00055 () | 12857..14620 | - | 1764 | WP_021546938.1 | DUF262 domain-containing protein | - |
| SM249107_RS00060 () | 14637..18314 | - | 3678 | WP_000687847.1 | BREX system P-loop protein BrxC | - |
| SM249107_RS00065 () | 18333..18917 | - | 585 | WP_000645940.1 | DUF1788 domain-containing protein | - |
| SM249107_RS00070 () | 18914..19513 | - | 600 | WP_001021938.1 | DUF1819 family protein | - |
| SM249107_RS00075 () | 19523..20449 | - | 927 | WP_000617209.1 | WYL domain-containing protein | - |
| SM249107_RS00080 () | 20518..20835 | - | 318 | WP_032156934.1 | hypothetical protein | - |
| SM249107_RS00085 () | 21059..21238 | + | 180 | WP_012600012.1 | hypothetical protein | - |
| SM249107_RS00090 () | 21270..21881 | - | 612 | Protein_15 | IS3 family transposase | - |
| SM249107_RS00100 () | 23077..24284 | + | 1208 | WP_089617520.1 | IS3 family transposase | - |
| SM249107_RS00105 () | 24311..24625 | - | 315 | Protein_17 | RepA protein | - |
| SM249107_RS00110 () | 25138..26856 | - | 1719 | WP_000739198.1 | hybrid sensor histidine kinase/response regulator | - |
| SM249107_RS00115 () | 26853..27341 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| SM249107_RS00120 () | 27334..28317 | - | 984 | WP_064769770.1 | hypothetical protein | - |
| SM249107_RS00125 () | 28321..29235 | - | 915 | WP_000891983.1 | response regulator | - |
| SM249107_RS00130 () | 29549..29857 | + | 309 | WP_000062770.1 | hypothetical protein | - |
| SM249107_RS00135 () | 29850..30065 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| SM249107_RS00140 () | 30068..30730 | + | 663 | WP_000958205.1 | lytic transglycosylase domain-containing protein | - |
| SM249107_RS00145 () | 30741..31040 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| SM249107_RS00150 () | 31050..33800 | + | 2751 | WP_048659795.1 | VirB3 family type IV secretion system protein | - |
| SM249107_RS00155 () | 33819..34535 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| SM249107_RS00160 () | 34547..34831 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| SM249107_RS00165 () | 34849..35856 | + | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| SM249107_RS24960 () | 35933..36073 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| SM249107_RS00170 () | 36066..36752 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| SM249107_RS00175 () | 36745..37638 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| SM249107_RS00180 () | 37635..38831 | + | 1197 | WP_000980841.1 | TrbI/VirB10 family protein | - |
| SM249107_RS00185 () | 38835..39884 | + | 1050 | WP_000342114.1 | P-type DNA transfer ATPase VirB11 | - |
| SM249107_RS00190 () | 39871..40272 | + | 402 | WP_000979494.1 | hypothetical protein | - |
| SM249107_RS00195 () | 40363..40680 | + | 318 | WP_000683352.1 | hypothetical protein | - |
| SM249107_RS00200 () | 40707..41042 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| SM249107_RS00205 () | 41018..41326 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| SM249107_RS00210 () | 41323..43524 | + | 2202 | WP_023281073.1 | type IA DNA topoisomerase | - |
| SM249107_RS00215 () | 43521..43913 | + | 393 | WP_001079960.1 | H-NS histone family protein | - |
| SM249107_RS00220 () | 44622..46529 | + | 1908 | WP_033546593.1 | TraM recognition domain-containing protein | - |
| SM249107_RS00225 () | 46544..47290 | + | 747 | WP_000909125.1 | hypothetical protein | - |
| SM249107_RS00230 () | 47283..47810 | + | 528 | WP_048659789.1 | phospholipase D family protein | - |
| SM249107_RS00235 () | 47842..48273 | - | 432 | WP_001776120.1 | hypothetical protein | - |
| SM249107_RS24965 () | 48405..48581 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| SM249107_RS00240 () | 48753..49718 | - | 966 | WP_023281075.1 | DUF1738 domain-containing protein | - |
| SM249107_RS00245 () | 50170..50595 | + | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| SM249107_RS00250 () | 50595..51866 | + | 1272 | WP_000457544.1 | Y-family DNA polymerase | - |
| SM249107_RS00255 () | 51945..52196 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| SM249107_RS00260 () | 52250..52555 | + | 306 | WP_000534920.1 | hypothetical protein | - |
| SM249107_RS00275 () | 53202..54173 | - | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| SM249107_RS00280 () | 54173..55339 | - | 1167 | WP_000523812.1 | plasmid-partitioning protein SopA | - |
| SM249107_RS00285 () | 56080..57090 | + | 1011 | WP_000200069.1 | replication initiation protein | - |
| SM249107_RS00290 () | 57256..57669 | - | 414 | Protein_54 | Tn3 family transposase | - |
| SM249107_RS00295 () | 57848..59047 | - | 1200 | WP_000948429.1 | IS91 family transposase | - |
| SM249107_RS00300 () | 59057..59245 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| SM249107_RS00305 () | 59353..60018 | - | 666 | Protein_57 | IS5 family transposase | - |
| SM249107_RS00310 () | 59977..60174 | + | 198 | WP_048659784.1 | DUF4752 family protein | - |
| SM249107_RS00315 () | 60222..60461 | + | 240 | Protein_59 | hypothetical protein | - |
| SM249107_RS00320 () | 60597..60797 | + | 201 | WP_001408980.1 | hypothetical protein | - |
| SM249107_RS00325 () | 60800..61048 | + | 249 | WP_001286530.1 | DNA polymerase III subunit theta | - |
| SM249107_RS00330 () | 61160..61552 | + | 393 | WP_000506718.1 | hypothetical protein | - |
| SM249107_RS00335 () | 61625..61846 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| SM249107_RS00340 () | 61846..62226 | + | 381 | WP_024166788.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| SM249107_RS00345 () | 62310..63110 | - | 801 | WP_001743161.1 | hypothetical protein | - |
| SM249107_RS00350 () | 63124..63618 | - | 495 | WP_048659776.1 | dUTP diphosphatase | - |
| SM249107_RS00355 () | 63611..64102 | - | 492 | WP_004010538.1 | hypothetical protein | - |
| SM249107_RS00360 () | 64099..64443 | - | 345 | WP_004010537.1 | hypothetical protein | - |
| SM249107_RS00365 () | 64516..65544 | - | 1029 | WP_048659775.1 | tyrosine-type recombinase/integrase | - |
| SM249107_RS00370 () | 65942..66979 | + | 1038 | WP_048659773.1 | hypothetical protein | - |
| SM249107_RS00375 () | 67007..67759 | - | 753 | Protein_71 | terminase | - |
| SM249107_RS00380 () | 67825..68529 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SM249107_RS00385 () | 68636..69226 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| SM249107_RS00390 () | 69363..69935 | + | 573 | WP_001493762.1 | recombinase family protein | - |
| SM249107_RS00395 () | 69972..71363 | + | 1392 | WP_001493761.1 | ISKra4-like element ISKpn19 family transposase | - |
| SM249107_RS00400 () | 71396..71824 | + | 429 | Protein_76 | recombinase family protein | - |
| SM249107_RS00405 () | 72143..72799 | - | 657 | WP_001516695.1 | quinolone resistance pentapeptide repeat protein QnrS1 | - |
| SM249107_RS00410 () | 73194..74209 | + | 1016 | Protein_78 | IS3 family transposase | - |
| SM249107_RS00415 () | 74252..77257 | - | 3006 | WP_001143760.1 | Tn3-like element Tn3 family transposase | - |
| SM249107_RS00420 () | 77421..77978 | + | 558 | WP_001235713.1 | recombinase family protein | - |
| SM249107_RS00425 () | 78161..79021 | + | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| SM249107_RS00430 () | 79170..79790 | + | 621 | Protein_82 | IS91-like element ISVsa3 family transposase | - |
| SM249107_RS00440 () | 80026..80268 | - | 243 | Protein_83 | phosphoglucosamine mutase | - |
| SM249107_RS00445 () | 80355..81170 | - | 816 | WP_004009399.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| SM249107_RS00455 () | 81500..81676 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| SM249107_RS00460 () | 81858..82862 | - | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| SM249107_RS00465 () | 82941..84707 | - | 1767 | Protein_87 | Tn3 family transposase | - |
| SM249107_RS00475 () | 84759..85463 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| SM249107_RS00485 () | 85524..86342 | + | 819 | Protein_89 | transposase | - |
| SM249107_RS00490 () | 86400..86642 | + | 243 | WP_000844627.1 | transposase | - |
| SM249107_RS00495 () | 86674..87309 | - | 636 | WP_039045916.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| SM249107_RS00500 () | 87415..88614 | + | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| SM249107_RS00505 () | 88646..89530 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| SM249107_RS00510 () | 89668..90075 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| SM249107_RS00515 () | 90064..91815 | + | 1752 | Protein_95 | Tn3-like element TnAs1 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|