MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 41271 bp
Accession: NZ_CP029284 Location: 30457..71727 Organism: Xanthomonas phaseoli pv. phaseoli strain Xcp25 Replicon: chromosome
Accession: NZ_CP029284 Location: 30457..71727 Organism: Xanthomonas phaseoli pv. phaseoli strain Xcp25 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DGM81_RS00120 (DGM81_00150) | 25790..26143 | - | 354 | WP_039573562.1 | hypothetical protein | - |
| DGM81_RS00125 (DGM81_00155) | 26189..26896 | - | 708 | WP_039573563.1 | StbB family protein | - |
| DGM81_RS00130 (DGM81_00160) | 26893..27348 | - | 456 | WP_011345589.1 | hypothetical protein | - |
| DGM81_RS00135 (DGM81_00165) | 27737..28132 | + | 396 | WP_039573570.1 | hypothetical protein | - |
| DGM81_RS00140 (DGM81_00170) | 28230..28499 | + | 270 | WP_033481412.1 | hypothetical protein | - |
| DGM81_RS00145 (DGM81_00175) | 28496..28789 | + | 294 | WP_011345592.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DGM81_RS00150 (DGM81_00180) | 28902..29522 | + | 621 | WP_011345593.1 | hypothetical protein | - |
| DGM81_RS00155 (DGM81_00185) | 29721..30062 | + | 342 | WP_029561219.1 | hypothetical protein | - |
| DGM81_RS00160 (DGM81_00190) | 30134..30331 | + | 198 | WP_011345595.1 | hypothetical protein | - |
| DGM81_RS00165 (DGM81_00195) | 30335..31909 | + | 1575 | WP_011345596.1 | type IV secretion system DNA-binding domain-containing protein | - |
| DGM81_RS00170 (DGM81_00200) | 31923..33941 | + | 2019 | Protein_33 | MobF family relaxase | - |
| DGM81_RS00175 (DGM81_00205) | 34012..35099 | + | 1088 | WP_087944778.1 | IS3 family transposase ISXac2 | Transposase |
| DGM81_RS00180 (DGM81_00210) | 35531..35863 | + | 333 | WP_003482333.1 | hypothetical protein | - |
| DGM81_RS00190 (DGM81_00220) | 36178..38103 | + | 1926 | WP_039574551.1 | M61 family metallopeptidase | - |
| DGM81_RS00195 | 38171..38350 | + | 180 | WP_039574549.1 | hypothetical protein | - |
| DGM81_RS00200 (DGM81_00230) | 38453..39841 | - | 1389 | WP_039588131.1 | type III secretion system effector XopQ | - |
| DGM81_RS00205 (DGM81_00240) | 40196..40486 | - | 291 | WP_017156025.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| DGM81_RS00210 | 40504..40617 | - | 114 | WP_017156024.1 | hypothetical protein | Toxin Detail |
| DGM81_RS00215 (DGM81_00250) | 40882..43389 | - | 2508 | WP_046834789.1 | AAA family ATPase | - |
| DGM81_RS00220 (DGM81_00255) | 43577..47563 | - | 3987 | WP_039588161.1 | exodeoxyribonuclease V subunit beta | - |
| DGM81_RS00225 (DGM81_00260) | 47560..50964 | - | 3405 | WP_039569011.1 | exodeoxyribonuclease V subunit gamma | - |
| DGM81_RS00230 (DGM81_00265) | 51317..56056 | - | 4740 | WP_039588162.1 | putative Ig domain-containing protein | - |
| DGM81_RS00235 (DGM81_00270) | 56354..56905 | + | 552 | WP_017165353.1 | tail fiber protein | - |
| DGM81_RS00240 (DGM81_00275) | 56953..57480 | + | 528 | WP_039569016.1 | tail fiber protein | - |
| DGM81_RS00245 (DGM81_00280) | 57540..58075 | + | 536 | Protein_47 | tail fiber protein | - |
| DGM81_RS00250 (DGM81_00285) | 58085..58633 | + | 549 | WP_039569019.1 | hypothetical protein | VF |
| DGM81_RS00255 (DGM81_00290) | 58652..58939 | - | 288 | WP_017158959.1 | hypothetical protein | - |
| DGM81_RS00260 (DGM81_00295) | 59321..60115 | + | 795 | WP_017156015.1 | putative phospholipid import ATP-binding protein MlaF | VF |
| DGM81_RS00265 (DGM81_00300) | 60115..60864 | + | 750 | WP_011349188.1 | MlaE family lipid ABC transporter permease subunit | - |
| DGM81_RS00270 (DGM81_00305) | 60876..61421 | + | 546 | WP_005912377.1 | outer membrane lipid asymmetry maintenance protein MlaD | - |
| DGM81_RS00275 (DGM81_00310) | 61418..62080 | + | 663 | WP_011349189.1 | ABC transporter substrate-binding protein | - |
| DGM81_RS00280 (DGM81_00315) | 62070..62360 | + | 291 | WP_039569023.1 | STAS domain-containing protein | - |
| DGM81_RS00285 (DGM81_00320) | 62371..63426 | + | 1056 | WP_039569025.1 | VacJ family lipoprotein | - |
| DGM81_RS00295 (DGM81_00340) | 64837..66009 | + | 1173 | WP_052756682.1 | TraB/VirB10 family protein | - |
| DGM81_RS00300 (DGM81_00345) | 66082..66771 | + | 690 | WP_127446637.1 | TraV family lipoprotein | - |
| DGM81_RS00305 (DGM81_00350) | 66790..67158 | + | 369 | WP_039575799.1 | TraA family conjugative transfer protein | - |
| DGM81_RS00310 (DGM81_00355) | 67177..68061 | + | 885 | WP_215824796.1 | TraC family protein | - |
| DGM81_RS00315 (DGM81_00360) | 68104..69330 | + | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| DGM81_RS00320 (DGM81_00365) | 69367..69693 | + | 327 | Protein_62 | hypothetical protein | - |
| DGM81_RS00325 (DGM81_00370) | 69899..71005 | - | 1107 | WP_022560441.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DGM81_RS00330 (DGM81_00375) | 70992..71198 | - | 207 | WP_022560440.1 | hypothetical protein | - |
| DGM81_RS00335 (DGM81_00380) | 71469..71996 | + | 528 | WP_007964984.1 | hypothetical protein | - |
| DGM81_RS00340 (DGM81_00385) | 72020..73285 | - | 1266 | WP_022560439.1 | phospholipase D-like domain-containing protein | - |
| DGM81_RS00345 (DGM81_00390) | 73406..73953 | - | 548 | Protein_67 | RNA 2'-phosphotransferase | - |
| DGM81_RS00350 (DGM81_00395) | 74109..74942 | - | 834 | WP_022560437.1 | SDR family oxidoreductase | - |
| DGM81_RS00355 (DGM81_00400) | 75043..75945 | + | 903 | WP_007964977.1 | LysR family transcriptional regulator | - |
| DGM81_RS00360 (DGM81_00405) | 76052..76584 | + | 533 | Protein_70 | YdeI/OmpD-associated family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|