MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 47735 bp
Accession: NZ_CP029268 Location: 1..47735 Organism: Xanthomonas citri pv. fuscans strain M12 Replicon: plasmid unnameda
Accession: NZ_CP029268 Location: 1..47735 Organism: Xanthomonas citri pv. fuscans strain M12 Replicon: plasmid unnameda
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DGN11_RS21530 (DGN11_22590) | 48..419 | - | 372 | WP_022557717.1 | hypothetical protein | - |
| DGN11_RS21535 (DGN11_22595) | 546..944 | - | 399 | WP_039731964.1 | hypothetical protein | - |
| DGN11_RS21540 (DGN11_22600) | 1523..1798 | - | 276 | WP_022557719.1 | hypothetical protein | - |
| DGN11_RS21545 (DGN11_22605) | 2358..2681 | - | 324 | WP_022557721.1 | hypothetical protein | - |
| DGN11_RS21550 (DGN11_22620) | 4003..4611 | + | 609 | WP_040965625.1 | hypothetical protein | - |
| DGN11_RS21555 (DGN11_22625) | 4648..5211 | - | 564 | WP_223842594.1 | hypothetical protein | - |
| DGN11_RS22220 | 5270..5836 | - | 567 | WP_022557726.1 | hypothetical protein | - |
| DGN11_RS21570 (DGN11_22640) | 5877..6338 | - | 462 | WP_039731445.1 | hypothetical protein | - |
| DGN11_RS21575 (DGN11_22645) | 6517..7374 | - | 858 | WP_033481873.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| DGN11_RS21580 (DGN11_22650) | 7367..8281 | - | 915 | WP_022557729.1 | hypothetical protein | - |
| DGN11_RS21585 | 8964..9068 | + | 105 | Protein_10 | type III secretion system effector protein | - |
| DGN11_RS21590 (DGN11_22660) | 9203..10255 | + | 1053 | WP_022557730.1 | type III secretion system YopJ family effector AvrBsT | - |
| DGN11_RS21595 (DGN11_22675) | 11539..11787 | - | 249 | WP_042826723.1 | hypothetical protein | - |
| DGN11_RS21600 (DGN11_22680) | 11877..12835 | - | 959 | Protein_13 | IS3 family transposase ISXcd1 | Transposase |
| DGN11_RS21605 (DGN11_22685) | 12868..15897 | - | 3030 | WP_022560486.1 | Tn3 family transposase ISPsy42 | Transposase |
| DGN11_RS21610 (DGN11_22690) | 15894..16487 | - | 594 | WP_022560487.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| DGN11_RS21615 (DGN11_22695) | 16699..16953 | + | 255 | WP_022557731.1 | plasmid stability protein | Antitoxin Detail |
| DGN11_RS21620 (DGN11_22700) | 16950..17366 | + | 417 | WP_022557732.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DGN11_RS21625 (DGN11_22705) | 17380..17934 | + | 555 | WP_033482006.1 | plasmid pRiA4b ORF-3 family protein | - |
| DGN11_RS21630 (DGN11_22710) | 18009..18146 | - | 138 | Protein_19 | IS3 family transposase ISXcd1 | Transposase |
| DGN11_RS21635 (DGN11_22715) | 18195..18743 | - | 549 | WP_022557734.1 | DNA topoisomerase | - |
| DGN11_RS21640 (DGN11_22720) | 18898..20190 | - | 1293 | WP_033481893.1 | M12 family metallo-peptidase | - |
| DGN11_RS21645 (DGN11_22725) | 20317..21636 | - | 1320 | WP_022557736.1 | right-handed parallel beta-helix repeat-containing protein | - |
| DGN11_RS21650 (DGN11_22735) | 22011..22865 | - | 855 | WP_022557737.1 | DNA topoisomerase | - |
| DGN11_RS21655 (DGN11_22740) | 22867..23115 | - | 249 | WP_033481882.1 | hypothetical protein | - |
| DGN11_RS21660 (DGN11_22745) | 23188..23427 | - | 240 | WP_005997461.1 | hypothetical protein | - |
| DGN11_RS21665 (DGN11_22750) | 23438..23746 | - | 309 | WP_223842595.1 | hypothetical protein | - |
| DGN11_RS21670 (DGN11_22755) | 23817..25169 | - | 1353 | WP_022557738.1 | TrbI/VirB10 family protein | - |
| DGN11_RS21675 (DGN11_22760) | 25185..26177 | - | 993 | WP_017164024.1 | P-type conjugative transfer protein TrbG | - |
| DGN11_RS21680 (DGN11_22765) | 26204..26455 | - | 252 | WP_022557739.1 | type IV secretion system protein | - |
| DGN11_RS21685 (DGN11_22775) | 26548..27637 | - | 1090 | Protein_30 | IS3 family transposase ISXac2 | Transposase |
| DGN11_RS21690 (DGN11_22785) | 28023..28412 | - | 390 | WP_022557740.1 | hypothetical protein | - |
| DGN11_RS21695 (DGN11_22790) | 28879..29325 | - | 447 | WP_022557741.1 | avidin/streptavidin family protein | - |
| DGN11_RS21700 (DGN11_22795) | 29655..29939 | + | 285 | WP_017154819.1 | hypothetical protein | - |
| DGN11_RS21705 (DGN11_22800) | 30105..30644 | - | 540 | WP_022557742.1 | plasmid pRiA4b ORF-3 family protein | - |
| DGN11_RS21710 (DGN11_22805) | 30658..31167 | - | 510 | WP_022557743.1 | hypothetical protein | - |
| DGN11_RS22225 (DGN11_22810) | 31164..33215 | - | 2052 | WP_022557744.1 | Conjugal transfer protein TraG | VF |
| DGN11_RS21720 (DGN11_22815) | 33220..36174 | - | 2955 | WP_022557745.1 | hypothetical protein | Relaxase |
| DGN11_RS21725 (DGN11_22820) | 36473..37063 | - | 591 | WP_048481488.1 | Type IV secretion system protein virB1 | VF |
| DGN11_RS21730 (DGN11_22825) | 37056..37652 | - | 597 | WP_080720968.1 | S26 family signal peptidase | - |
| DGN11_RS21735 (DGN11_22830) | 37657..38121 | - | 465 | WP_022557748.1 | DUF2840 domain-containing protein | - |
| DGN11_RS21740 (DGN11_22835) | 38461..38796 | - | 336 | WP_022557749.1 | hypothetical protein | - |
| DGN11_RS21745 (DGN11_22840) | 38793..39431 | - | 639 | WP_017162872.1 | ParA family partition ATPase | - |
| DGN11_RS21750 (DGN11_22850) | 40449..41270 | - | 822 | WP_022557750.1 | hypothetical protein | - |
| DGN11_RS21755 (DGN11_22855) | 41624..42208 | - | 585 | WP_022557751.1 | DUF6012 family protein | - |
| DGN11_RS21760 (DGN11_22860) | 42320..42664 | - | 345 | WP_022557752.1 | hypothetical protein | - |
| DGN11_RS21765 (DGN11_22865) | 42892..43119 | - | 228 | WP_022557753.1 | hypothetical protein | - |
| DGN11_RS21770 (DGN11_22870) | 43171..43443 | - | 273 | WP_022557754.1 | hypothetical protein | - |
| DGN11_RS21775 (DGN11_22880) | 43700..47716 | + | 4017 | WP_099802904.1 | type III secretion system effector avirulence protein AvrBs3 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|