MGE detailed information
MGE type: Conjugative plasmid MGE length: 146268 bp
Accession: NZ_CP029243 Location: 1..146268 Organism: Escherichia coli strain ECCRA-119 Replicon: plasmid pTB201
Accession: NZ_CP029243 Location: 1..146268 Organism: Escherichia coli strain ECCRA-119 Replicon: plasmid pTB201
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7235_RS25290 () | 228..1466 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| C7235_RS25295 () | 1466..2050 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| C7235_RS25310 () | 2543..3307 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| C7235_RS25320 () | 3534..3839 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| C7235_RS25325 () | 3850..5055 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| C7235_RS25330 () | 5283..6287 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| C7235_RS25335 () | 6469..6672 | - | 204 | WP_064765192.1 | hypothetical protein | - |
| C7235_RS25345 () | 6869..7708 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| C7235_RS25350 () | 7702..8049 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| C7235_RS25355 () | 8213..9004 | - | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| C7235_RS25360 () | 9010..9300 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| C7235_RS25365 () | 9412..9909 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| C7235_RS25370 () | 10054..11067 | + | 1014 | WP_000845039.1 | IS91 family transposase ISAzo26 | Transposase |
| C7235_RS27715 () | 11270..11620 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| C7235_RS25380 () | 11763..12242 | + | 480 | Protein_15 | PAS domain-containing protein | - |
| C7235_RS25390 () | 12330..13352 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| C7235_RS25395 () | 13349..14131 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| C7235_RS25400 () | 14199..15299 | + | 1101 | Protein_18 | Methyl-accepting chemotaxis protein McpQ | VF |
| C7235_RS25405 () | 15447..15686 | - | 240 | WP_094320496.1 | hypothetical protein | - |
| C7235_RS25425 () | 16601..17458 | - | 858 | WP_000130940.1 | incFII family plasmid replication initiator RepA | - |
| C7235_RS25430 () | 17451..17525 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C7235_RS25440 () | 17751..18011 | - | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| C7235_RS25445 () | 18250..18823 | - | 574 | Protein_23 | DUF2726 domain-containing protein | - |
| C7235_RS25450 () | 18861..19070 | - | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| C7235_RS25455 () | 19116..19577 | - | 462 | WP_001233871.1 | thermonuclease family protein | - |
| C7235_RS25460 () | 19820..20032 | - | 213 | WP_012311405.1 | hypothetical protein | - |
| C7235_RS25465 () | 20170..20730 | - | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| C7235_RS25470 () | 20785..21531 | - | 747 | WP_000205777.1 | conjugal transfer pilus acetylase TraX | - |
| C7235_RS25475 () | 21551..26821 | - | 5271 | WP_072769080.1 | Multifunctional conjugation protein TraI | Relaxase |
| C7235_RS25480 () | 26821..29028 | - | 2208 | WP_072649512.1 | type IV conjugative transfer system coupling protein TraD | - |
| C7235_RS25485 () | 29281..30012 | - | 732 | WP_162542028.1 | complement resistance protein TraT | - |
| C7235_RS25490 () | 30044..30547 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| C7235_RS25500 () | 30562..33383 | - | 2822 | Protein_33 | conjugal transfer mating pair stabilization protein TraG | - |
| C7235_RS25505 () | 33380..34753 | - | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| C7235_RS25510 () | 34753..35115 | - | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| C7235_RS25515 () | 35045..35590 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C7235_RS25520 () | 35577..35861 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C7235_RS25525 () | 35980..36327 | - | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| C7235_RS25530 () | 36343..37086 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| C7235_RS25535 () | 37079..37336 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| C7235_RS25540 () | 37363..39171 | - | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C7235_RS25545 () | 39168..39806 | - | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C7235_RS25550 () | 39834..40286 | - | 453 | WP_000069427.1 | hypothetical protein | - |
| C7235_RS25555 () | 40316..40777 | - | 462 | WP_000277845.1 | hypothetical protein | - |
| C7235_RS25560 () | 40803..41795 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| C7235_RS25565 () | 41792..42424 | - | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| C7235_RS25570 () | 42421..42807 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| C7235_RS25575 () | 42804..45431 | - | 2628 | WP_109138269.1 | type IV secretion system protein TraC | - |
| C7235_RS25580 () | 45591..45812 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| C7235_RS25585 () | 45947..46462 | - | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C7235_RS25590 () | 46459..46710 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| C7235_RS25595 () | 46707..47024 | - | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| C7235_RS25600 () | 47021..47593 | - | 573 | WP_000002780.1 | conjugal transfer protein TraP | - |
| C7235_RS25605 () | 47583..49010 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| C7235_RS25610 () | 49010..49714 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| C7235_RS25615 () | 49725..50291 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| C7235_RS25620 () | 50313..50624 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| C7235_RS25625 () | 50639..50998 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| C7235_RS25630 () | 51032..51259 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| C7235_RS25635 () | 51353..52039 | - | 687 | WP_000332484.1 | PAS domain-containing protein | - |
| C7235_RS25640 () | 52230..52613 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| C7235_RS25645 () | 52890..53537 | + | 648 | WP_000614936.1 | hypothetical protein | VF |
| C7235_RS25650 () | 53834..54655 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| C7235_RS25655 () | 54776..55063 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| C7235_RS27940 () | 55088..55294 | - | 207 | WP_000547939.1 | hypothetical protein | - |
| C7235_RS25675 () | 55985..56143 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 56187..56411 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 56187..56411 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 56187..56411 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 56187..56411 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| C7235_RS27725 () | 56223..56411 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| C7235_RS25680 () | 56423..57142 | - | 720 | WP_001276228.1 | plasmid SOS inhibition protein A | - |
| C7235_RS25685 () | 57139..57573 | - | 435 | WP_000845895.1 | conjugation system SOS inhibitor PsiB | - |
| C7235_RS25690 () | 57628..59586 | - | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| C7235_RS25695 () | 59645..59878 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| C7235_RS25700 () | 59934..60461 | - | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| C7235_RS25720 () | 60934..61206 | - | 273 | WP_072133095.1 | hypothetical protein | - |
| C7235_RS25730 () | 61358..61921 | - | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| C7235_RS25735 () | 61967..63328 | - | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
| C7235_RS25740 () | 63380..63610 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| C7235_RS27945 () | 64288..64616 | + | 329 | Protein_77 | pilus assembly protein | - |
| C7235_RS25760 () | 64604..64786 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| C7235_RS25765 () | 64786..65247 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| C7235_RS25770 () | 65247..65549 | - | 303 | WP_072256028.1 | antirestriction protein | - |
| C7235_RS25780 () | 66074..67045 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| C7235_RS25785 () | 67098..67795 | - | 698 | Protein_82 | IS1 family transposase | - |
| C7235_RS25795 () | 67849..68181 | - | 333 | Protein_83 | hypothetical protein | - |
| C7235_RS27950 () | 68250..68588 | - | 339 | WP_001513511.1 | hypothetical protein | - |
| C7235_RS25805 () | 69400..70371 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C7235_RS25810 () | 70371..71537 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| C7235_RS25815 () | 71837..72534 | - | 698 | Protein_87 | IS1 family transposase | - |
| C7235_RS25825 () | 72690..74192 | - | 1503 | WP_000715078.1 | hypothetical protein | - |
| C7235_RS25830 () | 74810..75259 | - | 450 | WP_109138270.1 | hypothetical protein | - |
| C7235_RS25835 () | 75377..75856 | + | 480 | WP_000190053.1 | hypothetical protein | - |
| C7235_RS25845 () | 76296..76523 | + | 228 | Protein_91 | malate dehydrogenase | - |
| C7235_RS25850 () | 76520..76651 | - | 132 | Protein_92 | phosphopyruvate hydratase | - |
| C7235_RS25855 () | 76649..76906 | + | 258 | Protein_93 | Tn3 family transposase | - |
| C7235_RS25860 () | 77140..77997 | - | 858 | WP_000968140.1 | Manganese transport system membrane protein MntB | ARG |
| C7235_RS25865 () | 77994..78851 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| C7235_RS25870 () | 78848..79675 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| C7235_RS25875 () | 79675..80589 | - | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| C7235_RS25890 () | 80945..81642 | + | 698 | Protein_98 | IS1 family transposase | - |
| C7235_RS25895 () | 81822..82335 | - | 514 | Protein_99 | DUF4113 domain-containing protein | - |
| C7235_RS27955 () | 82396..82500 | - | 105 | Protein_100 | AAA family ATPase | - |
| C7235_RS25905 () | 82502..82825 | - | 324 | Protein_101 | IS21 family transposase IS21 | Transposase |
| C7235_RS25910 () | 83320..84096 | - | 777 | Protein_102 | IS91 family transposase ISSbo1 | Transposase |
| C7235_RS25915 () | 84043..85235 | + | 1193 | WP_109138276.1 | IS3 family transposase ISCfr6 | Transposase |
| C7235_RS25920 () | 85780..86757 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| C7235_RS25925 () | 87042..87782 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| C7235_RS25930 () | 87903..88091 | - | 189 | WP_014640565.1 | hypothetical protein | - |
| C7235_RS25935 () | 88465..89367 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| C7235_RS25940 () | 89436..90545 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| C7235_RS25950 () | 90978..91931 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| C7235_RS25965 () | 93204..93362 | - | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| C7235_RS25970 () | 93546..94759 | + | 1214 | WP_162842477.1 | IS3 family transposase IS629 | Transposase |
| C7235_RS25975 () | 94907..95175 | - | 269 | Protein_112 | IS3 family transposase ISLad1 | Transposase |
| C7235_RS25985 () | 95232..95929 | + | 698 | Protein_113 | IS1 family transposase | - |
| C7235_RS25990 () | 96007..97396 | - | 1390 | Protein_114 | ISNCY family transposase ISKpn21 | Transposase |
| C7235_RS25995 () | 97706..97855 | - | 150 | Protein_115 | IS3 family transposase IS2 | Transposase |
| C7235_RS26000 () | 98033..99226 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| C7235_RS26010 () | 100449..101685 | - | 1237 | Protein_117 | IS3 family transposase IS2 | Transposase |
| C7235_RS26020 () | 102312..102605 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| C7235_RS26025 () | 102663..102862 | - | 200 | Protein_119 | lysis system i-spanin subunit Rz | - |
| C7235_RS26040 () | 104729..105828 | + | 1100 | Protein_121 | IS481 family transposase ISKpn28 | Transposase |
| C7235_RS26050 () | 107064..108179 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| C7235_RS26055 () | 108319..111978 | + | 3660 | WP_001111199.1 | Multidrug efflux ATP-binding/permease protein | VF |
| C7235_RS26060 () | 112082..113311 | + | 1230 | WP_000933675.1 | Enterochelin esterase | VF |
| C7235_RS26065 () | 113396..114352 | + | 957 | WP_064055648.1 | Ferri-bacillibactin esterase BesA | VF |
| C7235_RS26070 () | 114397..116574 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| C7235_RS26080 () | 116809..117506 | + | 698 | Protein_127 | IS1 family transposase | - |
| C7235_RS26085 () | 117517..117720 | - | 204 | WP_001259759.1 | colicin V family bacteriocin | - |
| C7235_RS27735 () | 117698..117934 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| C7235_RS26100 () | 118206..119318 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| C7235_RS26105 () | 119748..120029 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| C7235_RS26110 () | 120202..120369 | + | 168 | Protein_132 | colicin-B | - |
| C7235_RS26115 () | 120387..120914 | - | 528 | WP_000203272.1 | colicin B immunity protein | - |
| C7235_RS26125 () | 121158..121973 | + | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| C7235_RS26130 () | 122023..122376 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| C7235_RS26135 () | 122554..123345 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| C7235_RS26140 () | 123342..124031 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| C7235_RS26145 () | 124075..124425 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| C7235_RS26155 () | 125225..125515 | - | 291 | WP_000648897.1 | hypothetical protein | - |
| C7235_RS26160 () | 125515..126639 | - | 1125 | WP_032174239.1 | DUF4238 domain-containing protein | - |
| C7235_RS26165 () | 126674..128266 | - | 1593 | WP_109138272.1 | hypothetical protein | - |
| C7235_RS26170 () | 128488..129246 | - | 759 | WP_032174241.1 | hypothetical protein | - |
| C7235_RS26175 () | 129258..129749 | - | 492 | WP_109138273.1 | hypothetical protein | - |
| C7235_RS26180 () | 129986..130912 | + | 927 | WP_001290414.1 | hypothetical protein | - |
| C7235_RS26185 () | 130962..131216 | + | 255 | WP_000678528.1 | hypothetical protein | - |
| C7235_RS26195 () | 131714..132058 | + | 345 | WP_109138274.1 | abortive infection protein | - |
| C7235_RS26200 () | 132232..133233 | - | 1002 | WP_000785695.1 | DUF4238 domain-containing protein | - |
| C7235_RS26205 () | 133695..134690 | + | 996 | WP_000246635.1 | hypothetical protein | - |
| C7235_RS26210 () | 134694..135626 | + | 933 | WP_000991830.1 | hypothetical protein | - |
| C7235_RS26215 () | 135774..138701 | - | 2928 | WP_096845532.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| C7235_RS26220 () | 138710..139144 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| C7235_RS26225 () | 139216..139566 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| C7235_RS26230 () | 139580..139855 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| C7235_RS26235 () | 139891..140313 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| C7235_RS26240 () | 140365..142059 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| C7235_RS26245 () | 142077..142418 | + | 342 | Protein_156 | mercury resistance co-regulator MerD | - |
| C7235_RS26250 () | 142437..142673 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| C7235_RS26255 () | 142709..143378 | + | 670 | Protein_158 | putative signaling protein | VF |
| C7235_RS26265 () | 143453..144703 | + | 1251 | Protein_159 | DDE-type integrase/transposase/recombinase | - |
| C7235_RS26270 () | 144768..145470 | + | 703 | Protein_160 | IS6 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|