MGE detailed information
MGE type: Genomic_island MGE length: 75135 bp
Accession: NZ_CP029111 Location: 2318730..2393864 Organism: Escherichia coli strain AR436 Replicon: chromosome
Accession: NZ_CP029111 Location: 2318730..2393864 Organism: Escherichia coli strain AR436 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC23_RS12550 () | 2314209..2314712 | - | 504 | WP_000872004.1 | type 1 fimbria minor subunit FimG | - |
| CSC23_RS12555 () | 2314725..2315255 | - | 531 | WP_001244823.1 | type 1 fimbria minor subunit FimF | - |
| CSC23_RS12560 () | 2315265..2317901 | - | 2637 | WP_000120944.1 | fimbrial usher FimD | - |
| CSC23_RS12565 () | 2317968..2318693 | - | 726 | WP_000066573.1 | type 1 fimbria chaperone FimC | - |
| CSC23_RS12570 () | 2318730..2319269 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| CSC23_RS12575 () | 2319334..2319882 | - | 549 | WP_000695543.1 | hypothetical protein | VF |
| CSC23_RS12585 () | 2320362..2320958 | - | 597 | WP_000044711.1 | RNA pyrophosphohydrolase | VF |
| CSC23_RS12590 () | 2321436..2322038 | - | 603 | WP_000790583.1 | hypothetical protein | VF |
| CSC23_RS12605 () | 2323495..2324211 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| CSC23_RS12610 () | 2324231..2325337 | + | 1107 | WP_001331344.1 | N-acetylneuraminate epimerase | - |
| CSC23_RS12615 () | 2325402..2326382 | + | 981 | WP_000991444.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| CSC23_RS12620 () | 2326594..2327466 | + | 873 | WP_000168592.1 | HNH endonuclease | - |
| CSC23_RS12625 () | 2327636..2329711 | + | 2076 | WP_000177023.1 | AAA family ATPase | - |
| CSC23_RS12630 () | 2329704..2331047 | + | 1344 | WP_000504877.1 | McrC family protein | - |
| CSC23_RS12635 () | 2331044..2331430 | + | 387 | WP_000148644.1 | hypothetical protein | - |
| CSC23_RS12640 () | 2331481..2333628 | + | 2148 | WP_001040176.1 | N-6 DNA methylase | - |
| CSC23_RS12645 () | 2333628..2335082 | + | 1455 | WP_000109895.1 | restriction endonuclease subunit S | - |
| CSC23_RS12650 () | 2335118..2336404 | + | 1287 | WP_000377419.1 | hypothetical protein | - |
| CSC23_RS12655 () | 2336401..2340687 | + | 4287 | WP_000007257.1 | hypothetical protein | - |
| CSC23_RS12660 () | 2340698..2341546 | + | 849 | WP_000092642.1 | hypothetical protein | - |
| CSC23_RS12665 () | 2341549..2342706 | + | 1158 | WP_001004904.1 | hypothetical protein | - |
| CSC23_RS12670 () | 2342696..2344381 | + | 1686 | WP_000323666.1 | ATP-binding protein | - |
| CSC23_RS12675 () | 2344518..2344931 | + | 414 | WP_001368082.1 | hypothetical protein | - |
| CSC23_RS12680 () | 2344928..2346397 | + | 1470 | WP_001022619.1 | hypothetical protein | VF |
| CSC23_RS12685 () | 2346598..2347863 | - | 1266 | WP_001218329.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase ; Integrase | Integrase |
| CSC23_RS26395 () | 2348325..2348471 | - | 147 | WP_001290178.1 | hypothetical protein | - |
| CSC23_RS12695 () | 2348556..2348753 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| CSC23_RS12700 () | 2348773..2349261 | - | 489 | WP_000761685.1 | hypothetical protein | - |
| CSC23_RS12705 () | 2349258..2349635 | - | 378 | WP_001094443.1 | TA system toxin CbtA family protein | Toxin Detail |
| CSC23_RS12710 () | 2349725..2350093 | - | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| CSC23_RS12715 () | 2350173..2350394 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| CSC23_RS12720 () | 2350481..2350957 | - | 477 | WP_001186165.1 | RadC family protein | - |
| CSC23_RS12725 () | 2350972..2351457 | - | 486 | WP_000206664.1 | antirestriction protein | - |
| CSC23_RS12730 () | 2351549..2352367 | - | 819 | WP_001175163.1 | DUF945 domain-containing protein | - |
| CSC23_RS12735 () | 2352457..2352690 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| CSC23_RS12740 () | 2352696..2353373 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| CSC23_RS12745 () | 2353521..2354201 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| CSC23_RS12750 () | 2354404..2355288 | - | 885 | WP_000010383.1 | 50S ribosome-binding GTPase | - |
| CSC23_RS12755 () | 2355394..2356356 | + | 963 | WP_000126799.1 | hypothetical protein | - |
| CSC23_RS12760 () | 2356353..2357207 | - | 855 | WP_000110727.1 | hypothetical protein | - |
| CSC23_RS12770 () | 2358827..2359357 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| CSC23_RS12780 () | 2360027..2360758 | + | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| CSC23_RS12785 () | 2360974..2361756 | - | 783 | WP_072133117.1 | IS21 family transposase IS100kyp | Transposase |
| CSC23_RS12790 () | 2361753..2362775 | - | 1023 | WP_001295213.1 | IS21 family transposase IS100kyp | Transposase |
| CSC23_RS26160 () | 2362789..2363283 | - | 495 | WP_123906543.1 | phage terminase large subunit family protein | - |
| CSC23_RS12800 () | 2363228..2363710 | - | 483 | WP_000538703.1 | hypothetical protein | - |
| CSC23_RS12805 () | 2363914..2364417 | + | 504 | WP_001072164.1 | SLATT domain-containing protein | - |
| CSC23_RS12810 () | 2364420..2365196 | + | 777 | WP_000218942.1 | nucleotidyltransferase domain-containing protein | - |
| CSC23_RS12815 () | 2365475..2365822 | - | 348 | WP_001617303.1 | hypothetical protein | - |
| CSC23_RS12820 () | 2366473..2367276 | + | 804 | WP_001609855.1 | hypothetical protein | - |
| CSC23_RS12830 () | 2367462..2368013 | + | 552 | WP_000387046.1 | hypothetical protein | - |
| CSC23_RS12835 () | 2368262..2368711 | + | 450 | WP_001609859.1 | hypothetical protein | - |
| CSC23_RS12840 () | 2368749..2369570 | + | 822 | WP_000900255.1 | hypothetical protein | - |
| CSC23_RS12845 () | 2369641..2370432 | + | 792 | WP_000902464.1 | hypothetical protein | - |
| CSC23_RS12860 () | 2372191..2372792 | + | 602 | Protein_2232 | IS481 family transposase ISKpn28 | Transposase |
| CSC23_RS26400 () | 2374488..2374625 | + | 138 | WP_001611300.1 | hypothetical protein | - |
| CSC23_RS12870 () | 2374695..2375903 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| CSC23_RS12875 () | 2375919..2376038 | - | 120 | Protein_2235 | LysR family transcriptional regulator | - |
| CSC23_RS12880 () | 2376269..2377474 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| CSC23_RS12885 () | 2377918..2378238 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| CSC23_RS12890 () | 2378231..2378617 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| CSC23_RS12895 () | 2378625..2379311 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| CSC23_RS12900 () | 2379289..2379912 | - | 624 | WP_000088605.1 | hypothetical protein | VF |
| CSC23_RS12905 () | 2379994..2381199 | + | 1206 | WP_001089068.1 | hypothetical protein | ARG |
| CSC23_RS12910 () | 2381312..2381905 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| CSC23_RS12915 () | 2382038..2382409 | + | 372 | WP_035689358.1 | hypothetical protein | VF |
| CSC23_RS12920 () | 2382419..2383627 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| CSC23_RS12930 () | 2383734..2384210 | + | 477 | Protein_2245 | inovirus-type Gp2 protein | - |
| CSC23_RS12935 () | 2384457..2385032 | + | 576 | WP_000991584.1 | hypothetical protein | - |
| CSC23_RS12940 () | 2385101..2385337 | + | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| CSC23_RS26405 () | 2385334..2385492 | + | 159 | WP_000831911.1 | hypothetical protein | - |
| CSC23_RS12945 () | 2385580..2386128 | + | 549 | WP_001167422.1 | hypothetical protein | - |
| CSC23_RS12950 () | 2386147..2386491 | - | 345 | WP_000166952.1 | ProQ/FinO family protein | - |
| CSC23_RS12960 () | 2387124..2388209 | + | 1086 | WP_000179014.1 | DNA sulfur modification protein DndB | - |
| CSC23_RS12965 () | 2388206..2389840 | + | 1635 | WP_000041168.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| CSC23_RS12970 () | 2389830..2391830 | + | 2001 | WP_000905895.1 | DNA sulfur modification protein DndD | - |
| CSC23_RS12975 () | 2391830..2392186 | + | 357 | WP_000937304.1 | DNA sulfur modification protein DndE | - |
| CSC23_RS12980 () | 2392245..2393051 | - | 807 | WP_071533805.1 | DGQHR domain-containing protein | - |
| CSC23_RS12985 () | 2393100..2393405 | - | 306 | WP_000071509.1 | hypothetical protein | - |
| CSC23_RS12990 () | 2393568..2393864 | + | 297 | WP_001611271.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|