NZ_CP0287811..159394

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 159394 bp
Accession: NZ_CP028781        Location: 1..159394         Organism: Klebsiella pneumoniae subsp. pneumoniae strain SCKP020046       Replicon: plasmid pNDM5_020046


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CLQ69_RS00050 () 1..1011 + 1011 WP_004152063.1 RepB family plasmid replication initiator protein -
CLQ69_RS00055 () 1348..1545 - 198 WP_024144808.1 hypothetical protein -
CLQ69_RS00060 () 1728..2468 - 741 WP_001515717.1 tyrosine-type recombinase/integrase -
CLQ69_RS00065 () 3612..4559 + 948 WP_004152065.1 sensor domain-containing diguanylate cyclase -
CLQ69_RS00070 () 4586..4897 - 312 WP_071527918.1 EAL domain-containing protein -
CLQ69_RS00075 () 4884..4973 - 90 Protein_5 IS5 family transposase IS903B Transposase
CLQ69_RS00080 () 4962..5885 + 924 WP_004152067.1 IS5 family transposase IS903B Transposase
CLQ69_RS00085 () 6558..6815 - 258 WP_004197688.1 hypothetical protein -
CLQ69_RS00090 () 7417..8871 + 1455 WP_020444838.1 putative cyclic di-GMP phosphodiesterase PdeB VF
CLQ69_RS00095 () 9854..11131 - 1278 WP_004152070.1 DUF2254 domain-containing protein -
CLQ69_RS00100 () 11194..13197 - 2004 WP_004152071.1 choline BCCT transporter BetT -
CLQ69_RS00105 () 13343..14040 - 698 Protein_11 IS1 family transposase IS1X2 Transposase
CLQ69_RS00110 () 14112..14204 + 93 Protein_12 PapC protein -
CLQ69_RS00120 () 15529..16013 + 485 Protein_14 IS1 family transposase IS1X2 Transposase
CLQ69_RS00125 () 16029..16571 + 543 Protein_15 ISL3 family transposase ISKpn25 Transposase
CLQ69_RS00130 () 16867..17298 - 432 WP_004178091.1 silver-binding protein SilE -
CLQ69_RS00135 () 17549..19024 - 1476 WP_003032875.1 copper/silver sensor histidine kinase SilS -
CLQ69_RS00140 () 19017..19697 - 681 WP_001572351.1 Transcriptional regulatory protein CusR VF
CLQ69_RS00145 () 19887..21272 + 1386 WP_000475512.1 Cation efflux system protein CusC VF
CLQ69_RS00150 () 21301..21654 + 354 WP_001246153.1 cation efflux system protein CusF -
CLQ69_RS00155 () 21768..23060 + 1293 WP_004152079.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
CLQ69_RS00160 () 23071..26217 + 3147 WP_004098958.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
CLQ69_RS00165 () 26304..26744 + 441 WP_102009024.1 hypothetical protein -
CLQ69_RS00170 () 26871..29318 + 2448 WP_004098955.1 Ag(+)-translocating P-type ATPase SilP -
CLQ69_RS00175 () 29359..29556 + 198 WP_000843497.1 DUF2933 domain-containing protein -
CLQ69_RS00180 () 29590..30327 - 738 WP_004118669.1 Murein DD-endopeptidase MepM VF
CLQ69_RS00185 () 30616..31065 - 450 WP_001023257.1 copper resistance protein -
CLQ69_RS00190 () 31299..33116 + 1818 WP_000925242.1 multicopper oxidase PcoA -
CLQ69_RS00195 () 33116..34012 + 897 WP_001242438.1 copper resistance outer membrane transporter PcoB -
CLQ69_RS00200 () 34052..34432 + 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
CLQ69_RS00205 () 34437..35366 + 930 WP_004118344.1 copper resistance inner membrane protein PcoD -
CLQ69_RS00210 () 35421..36101 + 681 WP_001188930.1 Transcriptional activator protein CopR VF
CLQ69_RS00215 () 36098..37498 + 1401 WP_004152084.1 copper resistance membrane spanning protein PcoS -
CLQ69_RS00220 () 37715..38149 + 435 WP_004152085.1 copper resistance system metallochaperone PcoE -
CLQ69_RS00225 () 38381..38560 - 180 WP_004152086.1 type II toxin-antitoxin system RelE/ParE family toxin -
CLQ69_RS00230 () 38621..40241 - 1621 Protein_36 ISL3 family transposase -
CLQ69_RS00235 () 40303..40812 + 510 WP_031944101.1 aquaporin -
CLQ69_RS00240 () 40862..41359 - 498 WP_004152091.1 GNAT family N-acetyltransferase -
CLQ69_RS00245 () 41691..42017 + 327 WP_004152092.1 metalloregulator ArsR/SmtB family transcription factor -
CLQ69_RS00250 () 42017..42727 + 711 WP_085903505.1 arsenical resistance protein ArsH -
CLQ69_RS00255 () 42736..43281 + 546 WP_004182005.1 sigma-70 family RNA polymerase sigma factor -
CLQ69_RS00260 () 43357..43719 + 363 WP_004152095.1 arsenic metallochaperone ArsD family protein -
CLQ69_RS00265 () 43738..45494 + 1757 Protein_43 arsenical pump-driving ATPase -
CLQ69_RS00270 () 45616..46152 + 537 WP_004152096.1 GNAT family N-acetyltransferase -
CLQ69_RS00275 () 46185..46610 - 426 WP_004152097.1 glutaredoxin-dependent arsenate reductase -
CLQ69_RS00280 () 46623..47912 - 1290 WP_004152098.1 arsenite efflux transporter membrane subunit ArsB -
CLQ69_RS00285 () 47960..49711 - 1752 WP_004152099.1 Arsenical pump-driving ATPase VF
CLQ69_RS00290 () 49729..50091 - 363 WP_004152100.1 arsenite efflux transporter metallochaperone ArsD -
CLQ69_RS00295 () 50141..50491 - 351 WP_004152101.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
CLQ69_RS00300 () 50849..51118 + 270 WP_004152102.1 hypothetical protein -
CLQ69_RS00305 () 51106..51681 + 576 WP_004152103.1 hypothetical protein -
CLQ69_RS00310 () 51712..52206 + 495 WP_004152104.1 DNA-binding protein -
CLQ69_RS00315 () 52250..52618 + 369 WP_004152105.1 hypothetical protein -
CLQ69_RS00320 () 52652..52855 + 204 WP_004152106.1 hemolysin expression modulator Hha -
CLQ69_RS00325 () 52904..53161 + 258 WP_004152107.1 hypothetical protein -
CLQ69_RS00330 () 53237..53491 + 255 WP_004152108.1 hypothetical protein -
CLQ69_RS00335 () 53667..53933 + 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
CLQ69_RS00340 () 53921..54403 + 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
CLQ69_RS00345 () 54615..55961 + 1347 WP_020314316.1 ISNCY family transposase ISLad2 Transposase
CLQ69_RS00350 () 56462..57716 - 1255 Protein_60 IS3 family transposase ISKpn38 Transposase
CLQ69_RS00355 () 57804..58766 - 963 WP_004152113.1 M48 family metalloprotease -
CLQ69_RS00360 () 58753..59502 - 750 WP_009483782.1 phosphate-starvation-inducible PsiE family protein -
CLQ69_RS00365 () 59478..59690 - 213 Protein_63 sensor domain-containing diguanylate cyclase -
CLQ69_RS00370 () 59740..59937 - 198 WP_004152115.1 hypothetical protein -
CLQ69_RS00375 () 59937..62732 - 2796 WP_004152116.1 ATP-dependent Clp protease ATP-binding subunit ClpC VF
CLQ69_RS00380 () 62847..63416 - 570 WP_004152117.1 Spore protein SP21 VF
CLQ69_RS00385 () 63451..63732 - 282 WP_004152118.1 helix-turn-helix domain-containing protein -
CLQ69_RS00390 () 63928..64367 + 440 Protein_68 IS66 family insertion sequence hypothetical protein -
CLQ69_RS00395 () 64462..64578 + 117 Protein_69 hypothetical protein -
CLQ69_RS00400 () 64763..65460 + 698 Protein_70 IS1 family transposase IS1X3 Transposase
CLQ69_RS00405 () 65719..66699 + 981 WP_000019473.1 IS5 family transposase ISKpn26 Transposase
CLQ69_RS00410 () 66738..66824 - 87 WP_032188295.1 hypothetical protein -
CLQ69_RS00415 () 66876..67202 + 327 WP_004159231.1 hypothetical protein -
CLQ69_RS00420 () 67281..67800 - 520 Protein_74 IS5 family transposase ISPst7 Transposase
CLQ69_RS00425 () 67908..68777 - 870 WP_004152692.1 HTH-type transcriptional activator CmpR VF
CLQ69_RS00430 () 68771..69781 - 1011 WP_004152693.1 phosphonate dehydrogenase PtxD -
CLQ69_RS00435 () 69790..70617 - 828 WP_004152694.1 phosphonate ABC transporter, permease protein PhnE -
CLQ69_RS00440 () 70626..71489 - 864 WP_004152695.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
CLQ69_RS00445 () 71486..72313 - 828 WP_004153729.1 Glutamine transport ATP-binding protein GlnQ VF
CLQ69_RS00450 () 72655..72963 + 309 Protein_80 IS5 family transposase ISThi1 Transposase
CLQ69_RS00455 () 73169..73873 - 705 WP_004217321.1 IS6 family transposase IS26 Transposase
CLQ69_RS00460 () 73936..75129 + 1194 Protein_82 Tn3 family transposase TnpA_ISSba14 Transposase
CLQ69_RS00465 () 75177..75845 + 669 WP_044117068.1 IS6 family transposase IS26 Transposase
CLQ69_RS00470 () 76035..76850 - 816 WP_000018329.1 Aminoglycoside 3'-phosphotransferase ARG
CLQ69_RS00475 () 77001..77705 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CLQ69_RS00480 () 77651..77770 - 120 Protein_86 AraC family transcriptional regulator -
CLQ69_RS00485 () 77739..78095 - 357 WP_004199403.1 hypothetical protein -
CLQ69_RS00490 () 78098..78337 - 240 WP_001549892.1 hypothetical protein -
CLQ69_RS00495 () 78439..79659 + 1221 WP_000343760.1 ISL3 family transposase ISKox3 Transposase
CLQ69_RS00500 () 79748..80410 - 663 WP_001549893.1 Tn3 family transposase TnpR_TnEc1 Transposase
CLQ69_RS00505 () 80791..81453 + 663 WP_000516402.1 peptidyl-arginine deiminase -
CLQ69_RS00510 () 81553..81837 + 285 WP_001185481.1 hypothetical protein -
CLQ69_RS00515 () 82043..82354 + 312 WP_000469598.1 hypothetical protein -
CLQ69_RS00520 () 82390..82674 + 285 WP_001043731.1 hypothetical protein -
CLQ69_RS00525 () 82695..83048 - 354 WP_000877224.1 hypothetical protein -
CLQ69_RS00530 () 83236..83679 - 444 WP_001074369.1 hypothetical protein -
CLQ69_RS00535 () 83688..84701 - 1014 WP_001348704.1 replication initiation protein -
CLQ69_RS00540 () 85312..85464 + 153 Protein_98 DNA-binding protein -
CLQ69_RS00545 () 86054..86569 + 516 WP_001025390.1 DnaJ domain-containing protein -
CLQ69_RS00550 () 86628..86864 + 237 WP_000792381.1 hypothetical protein -
CLQ69_RS00555 () 86924..87475 + 552 WP_000662998.1 hypothetical protein -
CLQ69_RS00560 () 87541..87753 + 213 WP_004208549.1 hypothetical protein -
CLQ69_RS00565 () 87743..87985 + 243 WP_000008707.1 hypothetical protein -
CLQ69_RS00570 () 88079..88417 + 339 WP_001099725.1 hypothetical protein -
CLQ69_RS00575 () 88791..89006 - 216 WP_016197627.1 hypothetical protein -
CLQ69_RS00580 () 89251..89796 + 546 WP_001348698.1 hypothetical protein -
CLQ69_RS00585 () 89799..90959 + 1161 WP_004199101.1 hypothetical protein Relaxase
CLQ69_RS00590 () 91312..91821 + 510 WP_000455437.1 transcription termination factor NusG -
CLQ69_RS00595 () 91772..92008 + 237 WP_001348696.1 hypothetical protein -
CLQ69_RS00600 () 92054..92698 + 645 WP_000953538.1 Type IV secretion system protein virB1 VF
CLQ69_RS00605 () 92682..92972 + 291 WP_000916156.1 TrbC/VirB2 family protein -
CLQ69_RS00610 () 92997..95750 + 2754 WP_015060057.1 Type IV secretion system protein virB4 VF
CLQ69_RS00615 () 95760..96530 + 771 WP_000716326.1 pilus assembly protein -
CLQ69_RS00620 () 96540..96797 + 258 WP_000759841.1 EexN family lipoprotein -
CLQ69_RS00625 () 96809..97864 + 1056 WP_000235886.1 hypothetical protein VF
CLQ69_RS00630 () 98059..98787 + 729 WP_004199085.1 Type IV secretion system protein virB8 VF
CLQ69_RS00635 () 98793..99722 + 930 WP_000783386.1 TrbG/VirB9 family P-type conjugative transfer protein -
CLQ69_RS00640 () 99719..100933 + 1215 WP_001295060.1 Type IV secretion system protein virB10 VF
CLQ69_RS00645 () 100935..101132 + 198 WP_000629109.1 DNA-binding protein -
CLQ69_RS00650 () 101129..102163 + 1035 WP_000650512.1 Type IV secretion system protein PtlH VF
CLQ69_RS00655 () 102160..104001 + 1842 WP_004208539.1 type IV secretory system conjugative DNA transfer family protein -
CLQ69_RS00660 () 103998..104390 + 393 WP_000738524.1 cag pathogenicity island Cag12 family protein -
CLQ69_RS00665 () 104478..104792 + 315 WP_000754496.1 hypothetical protein -
CLQ69_RS00670 () 104878..105204 + 327 WP_004208538.1 hypothetical protein -
CLQ69_RS00675 () 105201..105695 + 495 WP_001215543.1 thermonuclease family protein -
CLQ69_RS00680 () 105778..107040 + 1263 WP_000517490.1 ATP-binding protein -
CLQ69_RS00685 () 107044..109371 + 2328 WP_004199098.1 type IA DNA topoisomerase -
CLQ69_RS00690 () 109383..109838 + 456 WP_001293458.1 H-NS histone family protein -
CLQ69_RS00695 () 109876..110526 - 651 WP_000351937.1 YkgJ family cysteine cluster protein -
CLQ69_RS00700 () 110799..110978 + 180 WP_023408316.1 hypothetical protein -
CLQ69_RS00705 () 110975..111796 + 822 WP_000196235.1 SprT-like domain-containing protein -
CLQ69_RS00710 () 111906..112160 + 255 WP_000510385.1 hypothetical protein -
CLQ69_RS00715 () 112178..112453 + 276 WP_000557557.1 hypothetical protein -
CLQ69_RS00720 () 112516..112728 + 213 WP_004221700.1 hypothetical protein -
CLQ69_RS00725 () 112686..112871 + 186 WP_004221702.1 hypothetical protein -
CLQ69_RS00730 () 113847..114392 - 546 Protein_136 Tn3 family transposase TnpA_Tn3 Transposase
CLQ69_RS00735 () 114536..117448 + 2913 Protein_137 Tn3 family transposase TnpA_IS3000 Transposase
CLQ69_RS00740 () 117474..120461 - 2988 WP_000124025.1 Tn3 family transposase TnpA_TnEc1 Transposase
CLQ69_RS00745 () 120629..121264 + 636 WP_000470623.1 Tn3 family transposase TnpR_TnEc1 Transposase
CLQ69_RS00750 () 121292..122128 - 837 WP_047671991.1 S-formylglutathione hydrolase -
CLQ69_RS00755 () 122192..122590 - 399 WP_008813494.1 VOC family protein -
CLQ69_RS00760 () 122632..123741 - 1110 WP_000842086.1 S-(hydroxymethyl)glutathione dehydrogenase -
CLQ69_RS00765 () 123772..124047 - 276 WP_001141270.1 formaldehyde-responsive transcriptional repressor FrmR -
CLQ69_RS00770 () 124677..125678 + 1002 WP_023408311.1 IS30 family transposase ISAba125 Transposase
CLQ69_RS00775 () 125624..125749 + 126 WP_071717284.1 hypothetical protein -
CLQ69_RS00780 () 125787..126803 - 1017 WP_001310555.1 IS5 family transposase IS5D Transposase
CLQ69_RS00785 () 127002..127814 + 813 WP_023408309.1 Metallo-beta-lactamase type 2 ARG
CLQ69_RS00790 () 127818..128183 + 366 WP_004201167.1 bleomycin binding protein Ble-MBL -
CLQ69_RS00795 () 128188..128826 + 639 WP_004201168.1 phosphoribosylanthranilate isomerase -
CLQ69_RS00800 () 128837..129868 - 1032 WP_004201169.1 protein-disulfide reductase DsbD N-terminal domain-containing protein -
CLQ69_RS00805 () 129873..130001 - 129 Protein_151 divalent-cation tolerance protein CutA -
CLQ69_RS00810 () 130066..130770 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CLQ69_RS00815 () 130716..130829 - 114 Protein_153 adenine-specific DNA-methyltransferase -
CLQ69_RS00820 () 130892..131797 + 906 WP_000219391.1 hypothetical protein ARG
CLQ69_RS00825 () 131794..133032 + 1239 WP_000004159.1 MFS transporter -
CLQ69_RS00830 () 133032..133616 + 585 WP_001137892.1 TetR family transcriptional regulator -
CLQ69_RS00835 () 133562..133918 + 357 WP_001336397.1 hypothetical protein -
CLQ69_RS00840 () 134048..134137 + 90 Protein_158 type VII secretion-associated protein -
CLQ69_RS00845 () 134109..134873 - 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
CLQ69_RS00850 () 134902..135084 + 183 WP_024143553.1 hypothetical protein -
CLQ69_RS00855 () 135100..135405 - 306 WP_000130000.1 hypothetical protein Relaxase
CLQ69_RS00860 () 135416..136621 - 1206 WP_000184001.1 chromate efflux transporter -
CLQ69_RS00865 () 136777..136980 - 204 WP_000376616.1 hypothetical protein -
CLQ69_RS00870 () 136999..137178 + 180 WP_108429375.1 hypothetical protein -
CLQ69_RS00875 () 137108..137945 - 838 Protein_165 Dihydropteroate synthase ARG
CLQ69_RS00880 () 137939..138287 - 349 Protein_166 Quaternary ammonium compound-resistance protein QacC ARG
CLQ69_RS00885 () 139758..140235 - 478 Protein_167 dihydrofolate reductase -
CLQ69_RS00890 () 140380..141389 + 1010 Protein_168 integrase/recombinase -
CLQ69_RS00895 () 141328..141942 + 615 WP_004193519.1 DUF3330 domain-containing protein -
CLQ69_RS00900 () 142118..142678 + 561 WP_001161490.1 Tn3 family transposase TnpR_TnAs1 Transposase
CLQ69_RS00905 () 142682..145648 + 2967 WP_001138014.1 Tn3 family transposase TnpA_TnAs1 Transposase
CLQ69_RS00910 () 145681..145914 - 234 Protein_172 IS5 family transposase ISPan1 Transposase
CLQ69_RS00915 () 146496..146882 + 387 WP_001039464.1 hypothetical protein -
CLQ69_RS00920 () 146891..146965 + 75 Protein_174 plasmid stabilization protein -
CLQ69_RS00925 () 147022..147945 - 924 WP_001118624.1 IS5 family transposase IS903B Transposase
CLQ69_RS00930 () 148801..149109 - 309 Protein_176 hypothetical protein -
CLQ69_RS00935 () 149119..149816 - 698 Protein_177 IS1 family transposase IS1X3 Transposase
CLQ69_RS00940 () 149968..151452 - 1485 WP_004152765.1 group II intron reverse transcriptase/maturase -
CLQ69_RS00945 () 151452..151703 - 252 WP_009483812.1 hypothetical protein -
CLQ69_RS00950 () 151858..152283 + 426 WP_004178083.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
CLQ69_RS00955 () 152283..153554 + 1272 WP_004152715.1 Y-family DNA polymerase -
CLQ69_RS00960 () 153633..153848 + 216 Protein_182 plasmid stabilization protein -
CLQ69_RS00965 () 153871..155069 - 1199 Protein_183 IS200-IS605 family transposase IS609 Transposase
CLQ69_RS00970 () 155283..155517 + 235 Protein_184 hypothetical protein -
CLQ69_RS00975 () 155544..156506 - 963 WP_004178084.1 hypothetical protein -
CLQ69_RS00980 () 156506..157477 - 972 WP_004152062.1 ParB/RepB/Spo0J family plasmid partition protein -
CLQ69_RS00985 () 157477..158643 - 1167 WP_000523813.1 Sporulation initiation inhibitor protein Soj VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance