MGE detailed information
MGE type: Genomic_island MGE length: 48806 bp
Accession: NZ_CP028762 Location: 4206164..4254969 Organism: Escherichia coli strain A12 Replicon: chromosome
Accession: NZ_CP028762 Location: 4206164..4254969 Organism: Escherichia coli strain A12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY65_RS20340 (4203762) | 4203762..4204487 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| AOY65_RS20345 (4204524) | 4204524..4205063 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| AOY65_RS20350 (4205128) | 4205128..4205682 | - | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| AOY65_RS20355 (4206164) | 4206164..4206760 | - | 597 | WP_025380688.1 | type 1 fimbria switch DNA invertase FimE | - |
| AOY65_RS20360 (4207237) | 4207237..4207838 | - | 602 | Protein_3994 | type 1 fimbria switch DNA invertase FimB | - |
| AOY65_RS20365 (4209293) | 4209293..4210009 | + | 717 | WP_001360088.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| AOY65_RS20370 (4210029) | 4210029..4211135 | + | 1107 | WP_001315214.1 | N-acetylneuraminate epimerase | - |
| AOY65_RS20375 (4211200) | 4211200..4212180 | + | 981 | WP_001295601.1 | sialate O-acetylesterase | - |
| AOY65_RS20380 (4212188) | 4212188..4212838 | - | 651 | WP_001037966.1 | HNH endonuclease | - |
| AOY65_RS20385 (4212975) | 4212975..4213118 | + | 144 | Protein_3999 | HNH endonuclease | - |
| AOY65_RS20390 (4213947) | 4213947..4215560 | - | 1614 | WP_000080195.1 | IS66-like element ISEc23 family transposase | - |
| AOY65_RS20395 (4215591) | 4215591..4215941 | - | 351 | WP_000624722.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| AOY65_RS20400 (4215938) | 4215938..4216300 | - | 363 | WP_001299377.1 | transposase | - |
| AOY65_RS20405 (4216445) | 4216445..4216576 | - | 132 | Protein_4003 | hypothetical protein | - |
| AOY65_RS20410 (4216661) | 4216661..4216858 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| AOY65_RS20415 (4216870) | 4216870..4217359 | - | 490 | Protein_4005 | DUF5983 family protein | - |
| AOY65_RS20420 (4217356) | 4217356..4217730 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| AOY65_RS20425 (4217820) | 4217820..4218188 | - | 369 | WP_001315620.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| AOY65_RS20430 (4218351) | 4218351..4218572 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| AOY65_RS20435 (4218635) | 4218635..4219111 | - | 477 | WP_001560709.1 | RadC family protein | - |
| AOY65_RS20440 (4219127) | 4219127..4219612 | - | 486 | WP_000849588.1 | antirestriction protein | - |
| AOY65_RS20445 (4219667) | 4219667..4220485 | - | 819 | WP_001234620.1 | DUF932 domain-containing protein | - |
| AOY65_RS20450 (4220585) | 4220585..4220818 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| AOY65_RS20455 (4220897) | 4220897..4221352 | - | 456 | WP_000581504.1 | IrmA family protein | - |
| AOY65_RS20460 (4221428) | 4221428..4223944 | - | 2517 | WP_001315618.1 | hypothetical protein | - |
| AOY65_RS20465 (4224065) | 4224065..4227184 | - | 3120 | WP_000820497.1 | autotransporter adhesin Ag43 | - |
| AOY65_RS20470 (4227556) | 4227556..4228428 | - | 873 | WP_001069760.1 | GTPase family protein | - |
| AOY65_RS20475 (4229659) | 4229659..4231143 | + | 1485 | WP_001297234.1 | YfjI family protein | - |
| AOY65_RS20480 (4231465) | 4231465..4232067 | - | 603 | WP_000813451.1 | hypothetical protein | - |
| AOY65_RS20485 (4232162) | 4232162..4232368 | - | 207 | WP_000235215.1 | AlpA family phage regulatory protein | - |
| AOY65_RS20490 (4233589) | 4233589..4233789 | - | 201 | WP_001297219.1 | hypothetical protein | - |
| AOY65_RS20495 (4233989) | 4233989..4234558 | + | 570 | WP_000221544.1 | inovirus Gp2 family protein | - |
| AOY65_RS20500 (4234818) | 4234818..4235219 | + | 402 | WP_000270978.1 | putative zinc ribbon protein | - |
| AOY65_RS20505 (4235207) | 4235207..4235641 | + | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| AOY65_RS20510 (4235996) | 4235996..4236376 | + | 381 | WP_002431009.1 | transposase | - |
| AOY65_RS20515 (4236373) | 4236373..4236720 | + | 348 | WP_000612632.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| AOY65_RS20520 (4236770) | 4236770..4238155 | + | 1386 | WP_000997960.1 | IS66 family transposase | - |
| AOY65_RS20525 (4238195) | 4238195..4238272 | + | 78 | Protein_4027 | DUF6404 family protein | - |
| AOY65_RS20530 (4238394) | 4238394..4239752 | - | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| AOY65_RS20535 (4240034) | 4240034..4240165 | + | 132 | Protein_4029 | IS3 family transposase | - |
| AOY65_RS20540 (4240230) | 4240230..4240360 | + | 131 | Protein_4030 | IS5/IS1182 family transposase | - |
| AOY65_RS20545 (4240485) | 4240485..4240742 | - | 258 | WP_000555341.1 | biofilm development regulator YmgB/AriR family protein | - |
| AOY65_RS20550 (4241081) | 4241081..4241185 | - | 105 | Protein_4032 | IS3 family transposase | - |
| AOY65_RS20555 (4241212) | 4241212..4241361 | - | 150 | Protein_4033 | IS3 family transposase | - |
| AOY65_RS20560 (4241423) | 4241423..4241492 | + | 70 | Protein_4034 | hypothetical protein | - |
| AOY65_RS23710 (4241503) | 4241503..4241727 | - | 225 | WP_001763232.1 | IS1 family transposase | - |
| AOY65_RS23715 (4241687) | 4241687..4241878 | - | 192 | WP_001391592.1 | IS1 family transposase | - |
| AOY65_RS23720 (4241923) | 4241923..4242198 | - | 276 | WP_001303900.1 | IS1-like element transposase | - |
| AOY65_RS20570 (4242285) | 4242285..4242353 | - | 69 | WP_211180522.1 | protein YkiE | - |
| AOY65_RS20575 (4242490) | 4242490..4243011 | + | 522 | WP_001283626.1 | RNA polymerase sigma factor FecI | - |
| AOY65_RS20580 (4243008) | 4243008..4243961 | + | 954 | WP_044863047.1 | ferric citrate uptake sigma factor regulator FecR | - |
| AOY65_RS20585 (4244048) | 4244048..4246372 | + | 2325 | WP_000188280.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| AOY65_RS20590 (4246417) | 4246417..4247319 | + | 903 | WP_001534011.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| AOY65_RS20595 (4247316) | 4247316..4248314 | + | 999 | WP_000125187.1 | iron-dicitrate ABC transporter permease FecC | - |
| AOY65_RS20600 (4248311) | 4248311..4249267 | + | 957 | WP_000684856.1 | Fe(3+) dicitrate ABC transporter permease subunit FecD | - |
| AOY65_RS20605 (4249268) | 4249268..4250035 | + | 768 | WP_000175457.1 | Fe(3+) dicitrate ABC transporter ATP-binding protein FecE | - |
| AOY65_RS20610 (4251062) | 4251062..4251409 | + | 348 | WP_000609174.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| AOY65_RS20615 (4251459) | 4251459..4252994 | + | 1536 | WP_001000406.1 | IS66 family transposase | - |
| AOY65_RS20620 (4253035) | 4253035..4253502 | - | 468 | Protein_4048 | IS3-like element IS911 family transposase | - |
| AOY65_RS20625 (4253512) | 4253512..4254303 | - | 792 | Protein_4049 | IS30-like element IS30 family transposase | - |
| AOY65_RS20630 (4254317) | 4254317..4254409 | + | 93 | Protein_4050 | inovirus-type Gp2 protein | - |
| AOY65_RS20635 (4254580) | 4254580..4254969 | + | 390 | WP_001315990.1 | putative zinc ribbon protein | - |
| AOY65_RS20640 (4255220) | 4255220..4255582 | + | 363 | WP_000859003.1 | 6-carboxytetrahydropterin synthase QueD | - |
| AOY65_RS20645 (4255845) | 4255845..4258016 | - | 2172 | WP_025380669.1 | protein DpdD | - |
| AOY65_RS20650 (4258016) | 4258016..4258561 | - | 546 | WP_000580210.1 | phospholipase D-like domain-containing protein DpdK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|