MGE detailed information
MGE type: Genomic_island MGE length: 23084 bp
Accession: NZ_CP028742 Location: 1104796..1127879 Organism: Escherichia coli strain A33 Replicon: chromosome
Accession: NZ_CP028742 Location: 1104796..1127879 Organism: Escherichia coli strain A33 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY86_RS05205 (1100911) | 1100911..1101336 | - | 426 | WP_000946068.1 | type VI secretion system baseplate subunit TssE | - |
| AOY86_RS05210 (1101341) | 1101341..1102825 | - | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| AOY86_RS05215 (1102848) | 1102848..1103351 | - | 504 | WP_000041477.1 | type VI secretion system contractile sheath small subunit | - |
| AOY86_RS05220 (1104057) | 1104057..1104575 | + | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| AOY86_RS05225 (1104796) | 1104796..1107027 | + | 2232 | WP_000053619.1 | Actin cross-linking toxin VgrG1 | VF |
| AOY86_RS05230 (1107040) | 1107040..1107804 | + | 765 | WP_000633876.1 | DUF4123 domain-containing protein | - |
| AOY86_RS05235 (1108253) | 1108253..1108671 | + | 419 | Protein_1004 | DUF3304 domain-containing protein | - |
| AOY86_RS05240 (1108656) | 1108656..1109210 | + | 555 | WP_000023344.1 | hypothetical protein | VF |
| AOY86_RS05245 (1109195) | 1109195..1109737 | + | 543 | WP_001518352.1 | hypothetical protein | VF |
| AOY86_RS05250 (1109722) | 1109722..1111815 | + | 2094 | WP_042041113.1 | hypothetical protein | VF |
| AOY86_RS05255 (1112091) | 1112091..1112855 | + | 765 | Protein_1008 | ISAs1 family transposase ISEc1 | Transposase |
| AOY86_RS05260 (1113084) | 1113084..1113587 | + | 504 | WP_000227712.1 | hypothetical protein | - |
| AOY86_RS05265 (1113681) | 1113681..1114169 | + | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| AOY86_RS05270 (1114195) | 1114195..1114389 | + | 195 | Protein_1011 | ISAs1 family transposase | - |
| AOY86_RS05275 (1114440) | 1114440..1115210 | - | 771 | WP_001118054.1 | 2-oxoglutaramate amidase | - |
| AOY86_RS05280 (1115391) | 1115391..1115837 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| AOY86_RS05285 (1115880) | 1115880..1118324 | - | 2445 | WP_000973130.1 | Acyl-coenzyme A dehydrogenase | VF |
| AOY86_RS05290 (1118564) | 1118564..1119142 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| AOY86_RS05295 (1119347) | 1119347..1120114 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| AOY86_RS05300 (1120085) | 1120085..1120825 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| AOY86_RS05305 (1121137) | 1121137..1121886 | + | 750 | WP_000093934.1 | Murein DD-endopeptidase MepH | VF |
| AOY86_RS05310 (1122062) | 1122062..1122559 | + | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| AOY86_RS05315 (1122554) | 1122554..1122997 | - | 444 | WP_139059028.1 | hypothetical protein | - |
| AOY86_RS05320 (1123076) | 1123076..1124788 | - | 1713 | Protein_1021 | Flagellar biosynthesis protein FlhA | VF |
| AOY86_RS05325 (1124760) | 1124760..1125545 | + | 786 | WP_000207543.1 | Chemotaxis protein LafU | VF |
| AOY86_RS05330 (1125616) | 1125616..1126671 | + | 1056 | WP_001226170.1 | DNA polymerase IV | - |
| AOY86_RS05335 (1126723) | 1126723..1127016 | + | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| AOY86_RS05340 (1127019) | 1127019..1127417 | + | 399 | WP_001263501.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| AOY86_RS05345 (1127427) | 1127427..1127879 | + | 453 | WP_001059897.1 | GNAT family N-acetyltransferase | - |
| AOY86_RS05350 (1128069) | 1128069..1129208 | + | 1140 | WP_000521578.1 | RNA ligase RtcB family protein | - |
| AOY86_RS05355 (1129205) | 1129205..1129819 | + | 615 | WP_000602123.1 | peptide chain release factor H | - |
| AOY86_RS05360 (1129876) | 1129876..1131333 | - | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| AOY86_RS05365 (1131594) | 1131594..1132052 | + | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| - (1132648) | 1132648..1132728 | + | 81 | NuclAT_4 | - | - |
| - (1132648) | 1132648..1132728 | + | 81 | NuclAT_4 | - | - |
| - (1132648) | 1132648..1132728 | + | 81 | NuclAT_4 | - | - |
| - (1132648) | 1132648..1132728 | + | 81 | NuclAT_4 | - | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|