MGE detailed information
MGE type: Genomic_island MGE length: 81536 bp
Accession: NZ_CP028732 Location: 426940..508475 Organism: Escherichia coli strain H3 Replicon: chromosome
Accession: NZ_CP028732 Location: 426940..508475 Organism: Escherichia coli strain H3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY60_RS01920 (423347) | 423347..424066 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| AOY60_RS01925 (424063) | 424063..425694 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| AOY60_RS01930 (425875) | 425875..426105 | + | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| AOY60_RS01935 (426117) | 426117..426389 | + | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| AOY60_RS01940 (426616) | 426616..426912 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | - |
| AOY60_RS01945 (426940) | 426940..427113 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | - |
| AOY60_RS01950 (427232) | 427232..428749 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| AOY60_RS01955 (428986) | 428986..430443 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| AOY60_RS01960 (430502) | 430502..432649 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| AOY60_RS01965 (432729) | 432729..434063 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| AOY60_RS01970 (434428) | 434428..435966 | - | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| AOY60_RS01975 (436715) | 436715..437557 | - | 843 | WP_001280493.1 | DUF4942 domain-containing protein | - |
| AOY60_RS01980 (437642) | 437642..437839 | - | 198 | WP_085949090.1 | DUF957 domain-containing protein | - |
| AOY60_RS01985 (437867) | 437867..438064 | - | 198 | Protein_371 | DUF5983 family protein | - |
| AOY60_RS01990 (438061) | 438061..438438 | - | 378 | WP_001094429.1 | TA system toxin CbtA family protein | Toxin Detail |
| AOY60_RS01995 (438485) | 438485..438862 | - | 378 | WP_001285617.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| AOY60_RS02000 (438942) | 438942..439163 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| AOY60_RS02005 (439250) | 439250..439726 | - | 477 | WP_001388380.1 | RadC family protein | - |
| AOY60_RS02010 (439742) | 439742..440215 | - | 474 | WP_000855081.1 | antirestriction protein | - |
| AOY60_RS02015 (440265) | 440265..442376 | + | 2112 | Protein_377 | Protein ClpV1 | VF |
| AOY60_RS02020 (442373) | 442373..442939 | + | 567 | WP_000148361.1 | hypothetical protein | - |
| AOY60_RS02025 (442933) | 442933..443475 | + | 543 | WP_001403984.1 | hypothetical protein | - |
| AOY60_RS02030 (443462) | 443462..445987 | + | 2526 | WP_001054503.1 | Actin cross-linking toxin VgrG1 | VF |
| AOY60_RS02035 (445984) | 445984..447666 | + | 1683 | WP_000170556.1 | hypothetical protein | VF |
| AOY60_RS02040 (447686) | 447686..448363 | + | 678 | WP_201489023.1 | T6SS immunity phospholipase A1-binding lipoprotein Tli1-EAEC | - |
| AOY60_RS02045 (448507) | 448507..449184 | + | 678 | WP_000196358.1 | T6SS immunity phospholipase A1-binding lipoprotein Tli1-EAEC | - |
| AOY60_RS02050 (449216) | 449216..449482 | + | 267 | WP_000033410.1 | hypothetical protein | VF |
| AOY60_RS02055 (449486) | 449486..450634 | + | 1149 | WP_001403985.1 | hypothetical protein | - |
| AOY60_RS02060 (450627) | 450627..451007 | + | 381 | WP_240726060.1 | type VI secretion protein | - |
| AOY60_RS02065 (451003) | 451003..451116 | + | 114 | Protein_387 | PerC family transcriptional regulator | - |
| AOY60_RS02070 (451137) | 451137..451781 | + | 645 | WP_001387055.1 | hypothetical protein | - |
| AOY60_RS02075 (451847) | 451847..452170 | + | 324 | WP_001387054.1 | hypothetical protein | - |
| AOY60_RS02080 (452201) | 452201..452780 | - | 580 | Protein_390 | integrase core domain-containing protein | - |
| AOY60_RS02085 (452776) | 452776..453458 | + | 683 | Protein_391 | hypothetical protein | - |
| AOY60_RS02090 (453485) | 453485..454501 | - | 1017 | Protein_392 | IS630 family transposase | - |
| AOY60_RS02095 (454897) | 454897..455373 | + | 477 | WP_000072549.1 | hypothetical protein | VF |
| AOY60_RS02100 (455376) | 455376..456854 | + | 1479 | WP_000215053.1 | hypothetical protein | VF |
| AOY60_RS02105 (456864) | 456864..457370 | + | 507 | WP_000233190.1 | type VI secretion system protein AaiC/Hcp2 | - |
| AOY60_RS02110 (457380) | 457380..457802 | + | 423 | WP_000555549.1 | hypothetical protein | - |
| AOY60_RS02115 (457795) | 457795..459597 | + | 1803 | WP_001390300.1 | type VI secretion system baseplate subunit TssF | - |
| AOY60_RS02120 (459588) | 459588..460520 | + | 933 | WP_001173973.1 | type VI secretion system baseplate subunit TssG | - |
| AOY60_RS02125 (460533) | 460533..462515 | + | 1983 | WP_000198270.1 | type VI secretion system tip protein TssI/VgrG | - |
| AOY60_RS02130 (462526) | 462526..462993 | + | 468 | WP_000005080.1 | hypothetical protein | - |
| AOY60_RS02135 (463003) | 463003..463302 | + | 300 | WP_001390299.1 | PAAR domain-containing protein | - |
| AOY60_RS02140 (463306) | 463306..464382 | + | 1077 | WP_001033155.1 | hypothetical protein | VF |
| AOY60_RS02145 (464390) | 464390..464941 | + | 552 | WP_000152747.1 | type VI secretion lipoprotein TssJ | - |
| AOY60_RS02150 (464960) | 464960..466372 | + | 1413 | WP_001154665.1 | type VI secretion system baseplate subunit TssK | - |
| AOY60_RS02155 (466711) | 466711..467301 | + | 591 | WP_001028111.1 | hypothetical protein | VF |
| AOY60_RS02160 (467307) | 467307..470711 | + | 3405 | WP_001403210.1 | type VI secretion protein IcmF/TssM N-terminal domain-containing protein | - |
| AOY60_RS02165 (470715) | 470715..473264 | + | 2550 | WP_000029849.1 | Protein ClpV1 | VF |
| AOY60_RS02170 (473461) | 473461..474198 | + | 738 | Protein_408 | IS3 family transposase IS1203 | Transposase |
| AOY60_RS02175 (474871) | 474871..476379 | + | 1509 | WP_032238842.1 | group II intron reverse transcriptase/maturase | - |
| AOY60_RS02180 (476463) | 476463..476942 | + | 480 | Protein_410 | IS3 family transposase IS629 | Transposase |
| AOY60_RS02185 (477335) | 477335..477528 | + | 194 | Protein_411 | hypothetical protein | - |
| AOY60_RS02190 (478705) | 478705..479271 | + | 567 | WP_000587872.1 | hypothetical protein | - |
| AOY60_RS02195 (479336) | 479336..479616 | + | 281 | Protein_413 | transposase | - |
| AOY60_RS02200 (479750) | 479750..480904 | + | 1155 | WP_000359994.1 | VasL domain-containing protein | - |
| AOY60_RS02205 (481970) | 481970..482158 | - | 189 | Protein_415 | IS66 family transposase | - |
| AOY60_RS02210 (482219) | 482219..483041 | + | 823 | Protein_416 | IS110 family transposase ISEc45 | Transposase |
| AOY60_RS02215 (483503) | 483503..487621 | + | 4119 | WP_170908283.1 | Serine protease pic autotransporter | VF |
| AOY60_RS02220 (487772) | 487772..488014 | - | 243 | Protein_418 | IS256 family transposase IS1414 | Transposase |
| AOY60_RS02225 (488053) | 488053..488505 | - | 453 | Protein_419 | IS66 family transposase ISEc8 | Transposase |
| AOY60_RS02230 (488593) | 488593..489027 | + | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| AOY60_RS02235 (489024) | 489024..489374 | + | 351 | WP_000624688.1 | IS66 family transposase ISEc47 | Transposase |
| AOY60_RS02240 (489405) | 489405..490829 | + | 1425 | Protein_422 | IS66 family transposase ISEc43 | Transposase |
| AOY60_RS02245 (491083) | 491083..491946 | - | 864 | Protein_423 | IS110 family transposase ISEc45 | Transposase |
| AOY60_RS02250 (491941) | 491941..492300 | - | 360 | Protein_424 | IS3 family transposase | - |
| AOY60_RS02255 (492288) | 492288..492368 | + | 81 | Protein_425 | hypothetical protein | - |
| AOY60_RS02260 (492365) | 492365..493516 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| AOY60_RS02265 (493529) | 493529..493786 | - | 258 | Protein_427 | IS3 family transposase IS911 | Transposase |
| AOY60_RS02270 (493856) | 493856..494149 | - | 294 | WP_001091149.1 | hypothetical protein | - |
| AOY60_RS02275 (494238) | 494238..497108 | - | 2871 | WP_000081335.1 | DEAD/DEAH box helicase family protein | - |
| AOY60_RS02280 (497111) | 497111..498739 | - | 1629 | WP_000105162.1 | site-specific DNA-methyltransferase | - |
| AOY60_RS02285 (498749) | 498749..501136 | - | 2388 | WP_000126413.1 | S8 family peptidase | - |
| AOY60_RS02290 (501146) | 501146..502126 | - | 981 | WP_001273465.1 | ATP-binding protein | - |
| AOY60_RS02295 (502152) | 502152..505001 | - | 2850 | WP_000286652.1 | SNF2-related protein | - |
| AOY60_RS02300 (505302) | 505302..505484 | + | 183 | WP_001387040.1 | hypothetical protein | - |
| AOY60_RS02305 (505412) | 505412..506005 | + | 594 | WP_001387039.1 | DUF2931 family protein | - |
| AOY60_RS02310 (506219) | 506219..506362 | - | 144 | WP_240726061.1 | replication initiation protein | - |
| AOY60_RS02315 (506472) | 506472..506735 | - | 264 | WP_001387038.1 | hypothetical protein | - |
| AOY60_RS02320 (507213) | 507213..508475 | - | 1263 | WP_001218809.1 | Prophage integrase IntS ; Integrase | Integrase |
| AOY60_RS02330 (508855) | 508855..509430 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| AOY60_RS02335 (509467) | 509467..511164 | - | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| AOY60_RS02340 (511140) | 511140..511478 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| AOY60_RS02345 (511594) | 511594..512895 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|