MGE detailed information
MGE type: Conjugative plasmid MGE length: 134869 bp
Accession: NZ_CP028717 Location: 1..134869 Organism: Klebsiella pneumoniae strain SCM96 Replicon: plasmid pSCM96-1
Accession: NZ_CP028717 Location: 1..134869 Organism: Klebsiella pneumoniae strain SCM96 Replicon: plasmid pSCM96-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DA106_RS26940 () | 699..1127 | + | 429 | Protein_1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| DA106_RS26945 () | 1446..2102 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| DA106_RS26950 () | 2384..3775 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| DA106_RS26955 () | 3812..4384 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| DA106_RS26960 () | 4521..5111 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| DA106_RS26965 () | 5162..5737 | + | 576 | WP_077256884.1 | DUF4113 domain-containing protein | - |
| DA106_RS26970 () | 5884..6165 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| DA106_RS26975 () | 6146..6475 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DA106_RS26980 () | 6711..6968 | + | 258 | WP_048337415.1 | hypothetical protein | - |
| DA106_RS26985 () | 7002..7706 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| DA106_RS26990 () | 7894..8202 | - | 309 | WP_004152383.1 | hypothetical protein | - |
| DA106_RS26995 () | 8199..8849 | - | 651 | WP_014343480.1 | DUF2726 domain-containing protein | - |
| DA106_RS27000 () | 8905..9549 | - | 645 | WP_014343481.1 | hypothetical protein | - |
| DA106_RS27005 () | 9599..10201 | - | 603 | WP_013023836.1 | hypothetical protein | - |
| DA106_RS27010 () | 10362..10955 | - | 594 | WP_013609537.1 | fertility inhibition protein FinO | - |
| DA106_RS27015 () | 11027..11752 | - | 726 | WP_013023834.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| DA106_RS27020 () | 11833..17094 | - | 5262 | WP_047665818.1 | Multifunctional conjugation protein TraI | Relaxase |
| DA106_RS27025 () | 17094..19406 | - | 2313 | Protein_18 | type IV conjugative transfer system coupling protein TraD | - |
| DA106_RS28865 () | 19533..20222 | - | 690 | WP_013023831.1 | hypothetical protein | - |
| DA106_RS27035 () | 20415..21146 | - | 732 | WP_013023830.1 | complement resistance protein TraT | - |
| DA106_RS27040 () | 21332..21865 | - | 534 | WP_014343486.1 | conjugal transfer protein TraS | - |
| DA106_RS27045 () | 21868..24717 | - | 2850 | WP_013609534.1 | conjugal transfer mating pair stabilization protein TraG | - |
| DA106_RS27050 () | 24717..26096 | - | 1380 | WP_014343487.1 | conjugal transfer protein TraH | - |
| DA106_RS27055 () | 26074..26517 | - | 444 | WP_013023828.1 | F-type conjugal transfer protein TrbF | - |
| DA106_RS27060 () | 26563..27120 | - | 558 | WP_013214031.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| DA106_RS27065 () | 27092..27331 | - | 240 | WP_004144400.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| DA106_RS27070 () | 27342..28094 | - | 753 | WP_048337413.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| DA106_RS27075 () | 28115..28441 | - | 327 | WP_004152676.1 | hypothetical protein | - |
| DA106_RS27080 () | 28454..28702 | - | 249 | WP_004152675.1 | hypothetical protein | - |
| DA106_RS27085 () | 28680..28934 | - | 255 | WP_004152674.1 | conjugal transfer protein TrbE | - |
| DA106_RS27090 () | 28966..30921 | - | 1956 | WP_013023827.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| DA106_RS27095 () | 30980..31618 | - | 639 | WP_011977786.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| DA106_RS27100 () | 31631..32620 | - | 990 | WP_009309872.1 | conjugal transfer pilus assembly protein TraU | - |
| DA106_RS27105 () | 32617..33006 | - | 390 | WP_004194992.1 | hypothetical protein | - |
| DA106_RS27110 () | 33048..33674 | - | 627 | WP_009309871.1 | type-F conjugative transfer system protein TraW | - |
| DA106_RS27115 () | 33674..34063 | - | 390 | WP_004197815.1 | type-F conjugative transfer system protein TrbI | - |
| DA106_RS27120 () | 34063..36702 | - | 2640 | WP_013023824.1 | type IV secretion system protein TraC | - |
| DA106_RS27125 () | 36774..37172 | - | 399 | WP_013609531.1 | hypothetical protein | - |
| DA106_RS27135 () | 37548..37952 | - | 405 | WP_004197817.1 | hypothetical protein | - |
| DA106_RS27140 () | 38019..38330 | - | 312 | WP_015344986.1 | hypothetical protein | - |
| DA106_RS27145 () | 38331..38549 | - | 219 | WP_015344987.1 | hypothetical protein | - |
| DA106_RS27150 () | 38655..39065 | - | 411 | WP_009309869.1 | hypothetical protein | - |
| DA106_RS27155 () | 39197..39781 | - | 585 | WP_013023822.1 | type IV conjugative transfer system lipoprotein TraV | - |
| DA106_RS27160 () | 39895..41319 | - | 1425 | WP_004194260.1 | conjugal transfer protein TraB | - |
| DA106_RS27165 () | 41319..42059 | - | 741 | WP_013023821.1 | type-F conjugative transfer system secretin TraK | - |
| DA106_RS27170 () | 42046..42612 | - | 567 | WP_004144423.1 | type IV conjugative transfer system protein TraE | - |
| DA106_RS27175 () | 42632..42937 | - | 306 | WP_004144424.1 | type IV conjugative transfer system protein TraL | - |
| DA106_RS27180 () | 42951..43319 | - | 369 | WP_004194426.1 | type IV conjugative transfer system pilin TraA | - |
| DA106_RS27185 () | 43388..43588 | - | 201 | WP_004194116.1 | TraY domain-containing protein | - |
| DA106_RS27190 () | 43674..44375 | - | 702 | WP_004194113.1 | hypothetical protein | - |
| DA106_RS27195 () | 44605..44997 | - | 393 | WP_004194114.1 | relaxosome protein TraM | - |
| DA106_RS27200 () | 45429..45914 | + | 486 | WP_001568108.1 | hypothetical protein | VF |
| DA106_RS27205 () | 45947..46276 | - | 330 | WP_011977736.1 | hypothetical protein | - |
| DA106_RS27210 () | 46309..47130 | - | 822 | WP_004152492.1 | DUF945 domain-containing protein | - |
| DA106_RS27220 () | 47938..49146 | + | 1209 | WP_015344990.1 | IS256 family transposase ISEic2 | Transposase |
| DA106_RS27225 () | 49282..49695 | - | 414 | WP_013023817.1 | helix-turn-helix domain-containing protein | - |
| DA106_RS27230 () | 49696..49974 | - | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| DA106_RS27235 () | 49964..50284 | - | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DA106_RS27240 () | 50365..50589 | - | 225 | WP_004152719.1 | hypothetical protein | - |
| DA106_RS27245 () | 50600..50812 | - | 213 | WP_013023815.1 | hypothetical protein | - |
| DA106_RS27250 () | 50873..51229 | - | 357 | WP_013023814.1 | hypothetical protein | - |
| DA106_RS27265 () | 52071..52388 | - | 318 | WP_013023810.1 | hypothetical protein | - |
| DA106_RS27270 () | 52403..52753 | - | 351 | WP_013023809.1 | hypothetical protein | - |
| DA106_RS27275 () | 52750..53022 | - | 273 | WP_014343506.1 | hypothetical protein | - |
| DA106_RS27280 () | 53715..53873 | - | 159 | WP_014343509.1 | type I toxin-antitoxin system Hok family toxin | - |
| DA106_RS27290 () | 54101..54475 | - | 375 | WP_047665807.1 | hypothetical protein | - |
| DA106_RS27295 () | 54531..54857 | - | 327 | WP_013023807.1 | hypothetical protein | - |
| DA106_RS27300 () | 54854..55582 | - | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| DA106_RS27305 () | 55579..56010 | - | 432 | WP_013023806.1 | conjugation system SOS inhibitor PsiB | - |
| DA106_RS27310 () | 56055..58112 | - | 2058 | WP_013023805.1 | ParB/RepB/Spo0J family partition protein | - |
| DA106_RS27315 () | 58182..58430 | - | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| DA106_RS27320 () | 58479..59021 | - | 543 | WP_015344994.1 | single-stranded DNA-binding protein | - |
| DA106_RS27335 () | 59851..60414 | - | 564 | WP_004152756.1 | methyltransferase | - |
| DA106_RS27340 () | 60462..61817 | - | 1356 | WP_015344996.1 | DUF3560 domain-containing protein | - |
| DA106_RS27345 () | 61869..62099 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| DA106_RS27350 () | 62191..62418 | - | 228 | WP_001568050.1 | hypothetical protein | - |
| DA106_RS27370 () | 63098..63418 | - | 321 | WP_001568049.1 | hypothetical protein | - |
| DA106_RS27375 () | 63453..63707 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| DA106_RS27380 () | 63895..64086 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| DA106_RS27385 () | 64129..64635 | - | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| DA106_RS28870 () | 64678..65106 | - | 429 | WP_004152356.1 | antirestriction protein | - |
| DA106_RS27395 () | 65787..66554 | - | 768 | WP_013214013.1 | hypothetical protein | - |
| DA106_RS27400 () | 66608..67027 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| DA106_RS27405 () | 67037..67258 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| DA106_RS27410 () | 67258..67959 | - | 702 | WP_001568041.1 | DNA methylase | - |
| DA106_RS27415 () | 68396..68626 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| DA106_RS27420 () | 68690..69361 | - | 672 | WP_015345000.1 | plasmid partitioning/stability family protein | - |
| DA106_RS27425 () | 69364..70335 | - | 972 | WP_001568038.1 | hypothetical protein | - |
| DA106_RS27430 () | 70584..72071 | - | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| DA106_RS27440 () | 72478..72909 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| DA106_RS27445 () | 72909..74180 | + | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
| DA106_RS27450 () | 74592..75467 | + | 876 | WP_004098982.1 | RepB family plasmid replication initiator protein | - |
| DA106_RS27455 () | 76148..76774 | + | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| DA106_RS27460 () | 76894..77073 | + | 180 | WP_006788217.1 | hypothetical protein | - |
| DA106_RS27465 () | 77529..78323 | - | 795 | WP_004197635.1 | site-specific integrase | - |
| DA106_RS27470 () | 78521..79537 | - | 1017 | WP_017899884.1 | hypothetical protein | - |
| DA106_RS27475 () | 79548..79862 | - | 315 | WP_053389906.1 | hypothetical protein | - |
| DA106_RS27480 () | 79889..80284 | - | 396 | WP_017899885.1 | hypothetical protein | - |
| DA106_RS27485 () | 80453..80758 | - | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| DA106_RS27490 () | 80760..80978 | - | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| DA106_RS27510 () | 81796..82086 | - | 291 | WP_013023783.1 | hypothetical protein | - |
| DA106_RS27515 () | 82083..83210 | - | 1128 | WP_013023782.1 | DUF4238 domain-containing protein | - |
| DA106_RS27520 () | 83244..84836 | - | 1593 | WP_015344964.1 | hypothetical protein | - |
| DA106_RS27525 () | 85043..85822 | - | 780 | WP_013023780.1 | hypothetical protein | - |
| DA106_RS27530 () | 85835..86335 | - | 501 | WP_013023779.1 | hypothetical protein | - |
| DA106_RS27535 () | 86610..86873 | + | 264 | WP_013023778.1 | hypothetical protein | - |
| DA106_RS27540 () | 86870..87436 | + | 567 | WP_013023777.1 | hypothetical protein | - |
| DA106_RS27545 () | 87467..87961 | + | 495 | WP_013023776.1 | hypothetical protein | - |
| DA106_RS27550 () | 88005..88373 | + | 369 | WP_048337418.1 | hypothetical protein | - |
| DA106_RS27555 () | 88407..88610 | + | 204 | WP_004098931.1 | hemolysin expression modulator Hha | - |
| DA106_RS27560 () | 88659..88916 | + | 258 | WP_017899889.1 | hypothetical protein | - |
| DA106_RS27565 () | 88992..89246 | + | 255 | WP_009653916.1 | hypothetical protein | - |
| DA106_RS27570 () | 89382..90158 | - | 777 | WP_013609504.1 | DUF2971 domain-containing protein | - |
| DA106_RS27575 () | 90399..90722 | - | 324 | WP_017899891.1 | hypothetical protein | - |
| DA106_RS27580 () | 90901..91170 | - | 270 | Protein_115 | SOS response-associated peptidase family protein | - |
| DA106_RS27590 () | 91306..91473 | + | 168 | Protein_116 | IS5 family transposase IS903 | Transposase |
| DA106_RS27595 () | 91529..91678 | + | 150 | Protein_117 | IS110 family transposase | - |
| DA106_RS27600 () | 91961..93142 | + | 1182 | WP_013023770.1 | DUF4268 domain-containing protein | - |
| DA106_RS27615 () | 94334..95191 | - | 858 | WP_013023768.1 | incFII family plasmid replication initiator RepA | - |
| DA106_RS27620 () | 95184..95261 | - | 78 | WP_004171457.1 | RepA leader peptide Tap | - |
| DA106_RS27625 () | 95493..95762 | - | 270 | WP_013609506.1 | replication regulatory protein RepA | - |
| DA106_RS27630 () | 95880..96359 | - | 480 | WP_014343478.1 | Phospholipase D | VF |
| DA106_RS27635 () | 96563..98140 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| DA106_RS27640 () | 98464..99168 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DA106_RS27650 () | 99218..99937 | + | 720 | Protein_125 | AAA family ATPase | - |
| DA106_RS27655 () | 99924..100775 | + | 852 | WP_000240536.1 | replication protein | - |
| DA106_RS27665 () | 101083..101898 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| DA106_RS27670 () | 101959..102762 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| DA106_RS27675 () | 102762..103598 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| DA106_RS27680 () | 103659..104363 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DA106_RS27685 () | 104514..105329 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| DA106_RS27690 () | 105519..106223 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DA106_RS27695 () | 106456..107316 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| DA106_RS27700 () | 107329..107622 | + | 294 | Protein_134 | tunicamycin resistance protein | - |
| DA106_RS27705 () | 107685..108038 | + | 354 | Protein_135 | IS6 family transposase IS15DI | Transposase |
| DA106_RS27710 () | 108103..108807 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DA106_RS27720 () | 109278..110291 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| DA106_RS27725 () | 110583..111137 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| DA106_RS27730 () | 111234..111686 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| DA106_RS27735 () | 111819..112292 | + | 474 | WP_001749985.1 | Dihydrofolate reductase type 1 | ARG |
| DA106_RS27740 () | 112473..113318 | + | 846 | WP_001749984.1 | Streptomycin 3''-adenylyltransferase | ARG |
| DA106_RS27745 () | 113435..113782 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| DA106_RS27750 () | 113776..114615 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| DA106_RS27760 () | 114743..115243 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| DA106_RS28875 () | 115564..115632 | + | 69 | Protein_145 | EAL domain-containing protein | - |
| DA106_RS27770 () | 115750..116514 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| DA106_RS27785 () | 117007..117591 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| DA106_RS27790 () | 117591..118829 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| DA106_RS27795 () | 118826..119731 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| DA106_RS27805 () | 119853..120557 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| DA106_RS27810 () | 120622..120876 | + | 255 | Protein_151 | Tn3 family transposase | - |
| DA106_RS27815 () | 120934..121176 | + | 243 | WP_000844627.1 | transposase | - |
| DA106_RS27820 () | 121208..121858 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| DA106_RS27825 () | 121964..123163 | + | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| DA106_RS27830 () | 123130..123318 | - | 189 | Protein_155 | IS91 family transposase | - |
| DA106_RS27835 () | 123430..123735 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| DA106_RS27840 () | 123763..124977 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| DA106_RS28880 () | 125194..125640 | - | 447 | Protein_158 | DUF3363 domain-containing protein | - |
| DA106_RS27850 () | 125924..128929 | - | 3006 | WP_001143759.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| DA106_RS27855 () | 129093..129650 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| DA106_RS27860 () | 129833..130693 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| DA106_RS27865 () | 130952..131428 | + | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| DA106_RS27870 () | 131475..132350 | - | 876 | WP_011091028.1 | Beta-lactamase CTX-M-1 | ARG |
| DA106_RS27875 () | 132685..132879 | - | 195 | Protein_164 | transposase | - |
| DA106_RS27885 () | 132936..133633 | + | 698 | Protein_165 | IS1 family transposase IS1G | Transposase |
| DA106_RS27890 () | 133649..134554 | - | 906 | Protein_166 | IS1380 family transposase ISEcp1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|