MGE detailed information
MGE type: Genomic_island MGE length: 20932 bp
Accession: NZ_CP028702 Location: 3702740..3723671 Organism: Escherichia coli strain J53 Replicon: chromosome
Accession: NZ_CP028702 Location: 3702740..3723671 Organism: Escherichia coli strain J53 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBB46_RS19235 () | 3698572..3699903 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| DBB46_RS19240 () | 3699925..3700914 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| DBB46_RS19250 () | 3701013..3701951 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| DBB46_RS24730 () | 3702266..3702484 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| DBB46_RS19260 () | 3702740..3703279 | + | 540 | WP_000675733.1 | hypothetical protein | - |
| DBB46_RS19265 () | 3703301..3704488 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| DBB46_RS19275 () | 3705511..3706656 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| DBB46_RS19280 () | 3706753..3707643 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| DBB46_RS19285 () | 3707673..3708443 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| DBB46_RS19290 () | 3708459..3709793 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| DBB46_RS19295 () | 3710168..3711739 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| DBB46_RS19300 () | 3711888..3712223 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| DBB46_RS19305 () | 3712223..3712687 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| DBB46_RS19310 () | 3712742..3713551 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| DBB46_RS19320 () | 3713800..3715080 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| DBB46_RS19325 () | 3715103..3715576 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| DBB46_RS19330 () | 3715587..3715958 | + | 372 | Protein_3535 | PTS sugar transporter subunit IIC | - |
| DBB46_RS19335 () | 3715954..3716511 | + | 558 | Protein_3536 | amidohydrolase family protein | - |
| DBB46_RS19340 () | 3716862..3718016 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| DBB46_RS19345 () | 3718029..3718889 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| DBB46_RS19350 () | 3719056..3719532 | + | 477 | WP_000203711.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| DBB46_RS19355 () | 3719571..3720374 | + | 804 | WP_000544489.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| DBB46_RS19360 () | 3720364..3721155 | + | 792 | WP_000534347.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| DBB46_RS19365 () | 3721156..3721911 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| DBB46_RS19370 () | 3722312..3722896 | + | 585 | WP_001045432.1 | type 1 fimbrial protein | - |
| DBB46_RS19375 () | 3722976..3723671 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| DBB46_RS19380 () | 3723700..3726216 | + | 2517 | WP_001355538.1 | fimbrial biogenesis outer membrane usher protein | - |
| DBB46_RS19385 () | 3726227..3727318 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| DBB46_RS19390 () | 3727361..3728221 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|