MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92738 bp
Accession: NZ_CP028701 Location: 1..92738 Organism: Escherichia coli strain 105 Replicon: plasmid pTA105
Accession: NZ_CP028701 Location: 1..92738 Organism: Escherichia coli strain 105 Replicon: plasmid pTA105
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E34_RS27750 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| C9E34_RS27765 () | 1782..2066 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C9E34_RS27770 () | 2066..2341 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E34_RS27775 () | 2436..2642 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| C9E34_RS27780 () | 2742..2957 | - | 216 | Protein_5 | transposase | - |
| C9E34_RS27785 () | 3001..3567 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| C9E34_RS27790 () | 3567..3983 | - | 417 | Protein_7 | IS91 family transposase | - |
| C9E34_RS27795 () | 3983..4168 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| C9E34_RS27800 () | 4345..6555 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| C9E34_RS27805 () | 6599..6988 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C9E34_RS27810 () | 7045..8033 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| C9E34_RS27820 () | 8214..12116 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| C9E34_RS27825 () | 12372..12853 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| C9E34_RS27835 () | 14295..15116 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C9E34_RS27840 () | 15116..16222 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C9E34_RS27845 () | 16312..18033 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C9E34_RS27850 () | 18107..19105 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C9E34_RS27855 () | 19158..19346 | + | 189 | Protein_18 | hypothetical protein | - |
| C9E34_RS27860 () | 19450..19536 | - | 87 | Protein_19 | IS3 family transposase ISEhe3 | Transposase |
| C9E34_RS27875 () | 19993..22689 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| C9E34_RS27880 () | 22776..23651 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| C9E34_RS27885 () | 23652..25619 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| C9E34_RS27890 () | 25619..27124 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| C9E34_RS27895 () | 27126..28349 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| C9E34_RS27900 () | 28380..28814 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| C9E34_RS27905 () | 28811..29365 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| C9E34_RS27910 () | 29380..29727 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| C9E34_RS27915 () | 29724..30323 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| C9E34_RS27920 () | 30320..31297 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| C9E34_RS27925 () | 31336..32508 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| C9E34_RS27930 () | 32495..33007 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| C9E34_RS27935 () | 33065..33898 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| C9E34_RS27940 () | 33990..34391 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| C9E34_RS27945 () | 34570..35741 | + | 1172 | Protein_34 | IS3 family transposase ISLad1 | Transposase |
| C9E34_RS27955 () | 36282..36797 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C9E34_RS27960 () | 36799..39795 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| C9E34_RS27965 () | 39845..41965 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C9E34_RS27970 () | 41969..43408 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| C9E34_RS28485 () | 43529..44021 | + | 493 | Protein_39 | Transcriptional repressor MprA | VF |
| C9E34_RS27990 () | 44152..44382 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| C9E34_RS27995 () | 44503..45243 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| C9E34_RS28000 () | 45528..46505 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| C9E34_RS28010 () | 46913..47113 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| C9E34_RS28015 () | 47110..47730 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| C9E34_RS28020 () | 47727..48410 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| C9E34_RS28025 () | 48869..49087 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C9E34_RS28030 () | 49089..49394 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C9E34_RS28035 () | 49395..50201 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| C9E34_RS28050 () | 52099..52437 | + | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| C9E34_RS28055 () | 53025..54191 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| C9E34_RS28060 () | 54191..55162 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C9E34_RS28085 () | 56462..58186 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| C9E34_RS28090 () | 58263..59165 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| C9E34_RS28095 () | 59169..59474 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| C9E34_RS28105 () | 59551..60234 | + | 684 | WP_000085945.1 | DNA methylase | - |
| C9E34_RS28110 () | 60235..60456 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| C9E34_RS28115 () | 60350..60904 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| C9E34_RS28490 () | 60950..61726 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| C9E34_RS28130 () | 62267..62569 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| C9E34_RS28135 () | 62616..63038 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| C9E34_RS28140 () | 63035..63226 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C9E34_RS28495 () | 63196..63705 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| C9E34_RS28155 () | 64222..64452 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C9E34_RS28160 () | 64504..65865 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| C9E34_RS28165 () | 65912..66475 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| C9E34_RS28170 () | 66561..67016 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| C9E34_RS28175 () | 67086..67292 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| C9E34_RS28180 () | 67318..67770 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| C9E34_RS28185 () | 67827..68060 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| C9E34_RS28190 () | 68126..70084 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| C9E34_RS28195 () | 70139..70573 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| C9E34_RS28200 () | 70570..71331 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 71300..71498 | + | 199 | NuclAT_0 | - | - |
| - () | 71300..71498 | + | 199 | NuclAT_0 | - | - |
| - () | 71300..71498 | + | 199 | NuclAT_0 | - | - |
| - () | 71300..71498 | + | 199 | NuclAT_0 | - | - |
| C9E34_RS28205 () | 71563..71721 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E34_RS28210 () | 71855..73876 | + | 2022 | Protein_75 | hypothetical protein | Relaxase |
| C9E34_RS28215 () | 73944..74375 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| C9E34_RS28230 () | 75054..75403 | - | 350 | Protein_77 | IS3 family transposase IS3H | Transposase |
| C9E34_RS28235 () | 75497..75760 | + | 264 | Protein_78 | IS21 family transposase ISEc62 | Transposase |
| C9E34_RS28240 () | 75800..75920 | + | 121 | Protein_79 | IS21 family transposase ISEc62 | Transposase |
| C9E34_RS28245 () | 75917..76069 | + | 153 | Protein_80 | IS1 family transposase | - |
| C9E34_RS28250 () | 76176..85685 | + | 9510 | WP_000581715.1 | Toxin B | VF |
| C9E34_RS28255 () | 85759..85983 | + | 225 | Protein_82 | IS3 family transposase IS3H | Transposase |
| C9E34_RS28260 () | 86051..86221 | - | 171 | Protein_83 | IS3 family transposase IS1203 | Transposase |
| C9E34_RS28265 () | 86228..86479 | - | 252 | Protein_84 | IS3 family transposase IS1203 | Transposase |
| C9E34_RS28270 () | 86536..87924 | + | 1389 | Protein_85 | Multifunctional conjugation protein TraI | Relaxase |
| C9E34_RS28275 () | 87944..88690 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| C9E34_RS28280 () | 88749..89609 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| C9E34_RS28285 () | 89712..90272 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| C9E34_RS28290 () | 90405..90617 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| C9E34_RS28295 () | 90862..91323 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| C9E34_RS28300 () | 91369..91578 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| C9E34_RS28305 () | 91616..91954 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| C9E34_RS28310 () | 92194..92448 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|