MGE detailed information
MGE type: Genomic_island MGE length: 21240 bp
Accession: NZ_CP028700 Location: 4772202..4793441 Organism: Escherichia coli strain 105 Replicon: chromosome
Accession: NZ_CP028700 Location: 4772202..4793441 Organism: Escherichia coli strain 105 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E34_RS24600 () | 4767928..4768470 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| C9E34_RS24605 () | 4768763..4770913 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| C9E34_RS24610 () | 4770963..4771166 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| C9E34_RS24615 () | 4771177..4772133 | + | 957 | WP_001297640.1 | GTPase | - |
| C9E34_RS24620 () | 4772202..4773560 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| C9E34_RS24625 () | 4773569..4773853 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| C9E34_RS24630 () | 4774131..4776563 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| C9E34_RS24635 () | 4776630..4778099 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| C9E34_RS24640 () | 4778099..4779853 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4780003..4780079 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4780003..4780079 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4780003..4780079 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4780003..4780079 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4780003..4780079 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4780003..4780079 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4780003..4780079 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4780003..4780079 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| C9E34_RS24645 () | 4780074..4780415 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| C9E34_RS24650 () | 4780462..4781625 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| C9E34_RS24655 () | 4781673..4782554 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| C9E34_RS24660 () | 4782651..4782815 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| C9E34_RS24665 () | 4782992..4784404 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| C9E34_RS28475 () | 4784647..4784847 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| C9E34_RS24670 () | 4784852..4785604 | - | 753 | Protein_4697 | hypothetical protein | VF |
| C9E34_RS24675 () | 4786071..4787303 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| C9E34_RS24680 () | 4787344..4788615 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| C9E34_RS24685 () | 4788731..4789882 | + | 1152 | WP_001302771.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| C9E34_RS24690 () | 4789892..4790659 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| C9E34_RS24695 () | 4790656..4790922 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| C9E34_RS24700 () | 4791234..4793441 | + | 2208 | WP_000535072.1 | hypothetical protein | VF |
| C9E34_RS24710 () | 4793707..4794549 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| C9E34_RS24715 () | 4794617..4795795 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |