MGE detailed information
MGE type: Prophage MGE length: 42774 bp
Accession: NZ_CP028700 Location: 4391810..4434583 Organism: Escherichia coli strain 105 Replicon: chromosome
Accession: NZ_CP028700 Location: 4391810..4434583 Organism: Escherichia coli strain 105 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E34_RS22780 () | 4388102..4389058 | + | 957 | WP_000121321.1 | molybdenum cofactor insertion chaperone PaoD | - |
| C9E34_RS22785 () | 4389237..4390364 | - | 1128 | WP_000171064.1 | MFS transporter | - |
| C9E34_RS22790 () | 4390506..4391564 | - | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
| C9E34_RS22795 () | 4391810..4392712 | + | 903 | WP_010917758.1 | HTH-type transcriptional regulator ArgP | VF |
| C9E34_RS22805 () | 4393415..4393693 | - | 279 | WP_001301751.1 | hypothetical protein | - |
| C9E34_RS22810 () | 4393860..4394582 | - | 723 | WP_000361969.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| C9E34_RS22815 () | 4394681..4395580 | + | 900 | WP_000687183.1 | HTH-type transcriptional regulator ArgP | VF |
| C9E34_RS22820 () | 4396256..4397212 | + | 957 | WP_000205213.1 | hypothetical protein | - |
| C9E34_RS22825 () | 4397345..4399678 | - | 2334 | WP_000016225.1 | toprim domain-containing protein | - |
| C9E34_RS22830 () | 4399692..4400015 | - | 324 | WP_000562750.1 | DUF5375 family protein | - |
| C9E34_RS22835 () | 4400015..4400236 | - | 222 | WP_001071227.1 | hypothetical protein | - |
| C9E34_RS22840 () | 4400233..4400790 | - | 558 | WP_000973389.1 | host cell division inhibitor Icd-like protein | - |
| C9E34_RS22845 () | 4400787..4401047 | - | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
| C9E34_RS22850 () | 4401981..4402733 | + | 753 | WP_000154958.1 | septation initiation protein | - |
| C9E34_RS22855 () | 4402730..4403281 | + | 552 | WP_000968317.1 | Polarity suppression protein | - |
| C9E34_RS22860 () | 4403287..4403559 | + | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
| C9E34_RS22870 () | 4403969..4404535 | - | 567 | WP_000350115.1 | hypothetical protein | - |
| C9E34_RS22875 () | 4404535..4405125 | - | 591 | WP_000647284.1 | hypothetical protein | - |
| C9E34_RS22880 () | 4405156..4405788 | - | 633 | WP_000999326.1 | AAA family ATPase | - |
| C9E34_RS22885 () | 4405781..4406239 | - | 459 | WP_000251694.1 | hypothetical protein | - |
| C9E34_RS22890 () | 4406239..4406856 | - | 618 | WP_001303996.1 | hypothetical protein | - |
| C9E34_RS22895 () | 4406829..4407245 | - | 417 | WP_000082144.1 | hypothetical protein | - |
| C9E34_RS22900 () | 4407249..4408430 | - | 1182 | WP_001130487.1 | hypothetical protein ; Integrase | Integrase |
| C9E34_RS22905 () | 4408917..4409351 | + | 435 | Protein_4351 | IS3 family transposase ISEc48 | Transposase |
| C9E34_RS22910 () | 4409393..4410136 | - | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| C9E34_RS22915 () | 4410960..4411733 | + | 774 | WP_000355475.1 | hypothetical protein | - |
| C9E34_RS22920 () | 4411791..4412345 | - | 555 | WP_000904979.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| C9E34_RS22925 () | 4412375..4412785 | + | 411 | WP_001115553.1 | tail fiber protein | - |
| C9E34_RS22930 () | 4412806..4413249 | + | 444 | WP_000344820.1 | tail assembly chaperone | - |
| C9E34_RS22935 () | 4413221..4413814 | - | 594 | WP_000805544.1 | tail fiber assembly protein | - |
| C9E34_RS22940 () | 4413814..4414608 | - | 795 | WP_001096963.1 | tail fiber protein | - |
| C9E34_RS22945 () | 4414608..4414919 | - | 312 | WP_000788819.1 | hypothetical protein | - |
| C9E34_RS22950 () | 4414916..4415838 | - | 923 | Protein_4360 | replication protein | - |
| C9E34_RS22955 () | 4415871..4416164 | - | 294 | WP_000251069.1 | lambda phage CII family protein | - |
| C9E34_RS22960 () | 4416283..4416483 | - | 201 | WP_000437875.1 | Cro/Cl family transcriptional regulator | - |
| C9E34_RS22965 () | 4416584..4417297 | + | 714 | WP_001274756.1 | LexA family transcriptional regulator | - |
| C9E34_RS22970 () | 4417425..4417814 | + | 390 | WP_000708827.1 | hypothetical protein | - |
| C9E34_RS22975 () | 4418054..4418299 | + | 246 | WP_001303805.1 | transcription antitermination protein | - |
| C9E34_RS22980 () | 4418244..4419164 | + | 921 | Protein_4366 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C9E34_RS22990 () | 4419369..4420622 | - | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
| C9E34_RS22995 () | 4420634..4421737 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| C9E34_RS23000 () | 4422025..4423080 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| C9E34_RS23005 () | 4423119..4423520 | - | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| C9E34_RS23010 () | 4423578..4424822 | - | 1245 | WP_000189536.1 | esterase FrsA | - |
| - () | 4424238..4424318 | - | 81 | NuclAT_12 | - | - |
| - () | 4424238..4424318 | - | 81 | NuclAT_12 | - | - |
| - () | 4424238..4424318 | - | 81 | NuclAT_12 | - | - |
| - () | 4424238..4424318 | - | 81 | NuclAT_12 | - | - |
| C9E34_RS23015 () | 4424914..4425372 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| C9E34_RS23020 () | 4425633..4427090 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| C9E34_RS23025 () | 4427147..4427668 | - | 522 | Protein_4374 | peptide chain release factor H | - |
| C9E34_RS23030 () | 4427667..4427870 | - | 204 | Protein_4375 | RNA ligase RtcB family protein | - |
| C9E34_RS23035 () | 4428189..4428641 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| C9E34_RS23040 () | 4428651..4429049 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| C9E34_RS23045 () | 4429052..4429345 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| C9E34_RS23050 () | 4429397..4430452 | - | 1056 | WP_001226188.1 | DNA polymerase IV | - |
| C9E34_RS23055 () | 4430523..4431308 | - | 786 | WP_000207556.1 | hypothetical protein | VF |
| C9E34_RS23060 () | 4431280..4432992 | + | 1713 | Protein_4381 | hypothetical protein | VF |
| C9E34_RS23065 () | 4433137..4433634 | - | 498 | Protein_4382 | REP-associated tyrosine transposase RayT | - |
| C9E34_RS23070 () | 4433810..4434583 | - | 774 | WP_000543891.1 | hypothetical protein | VF |
| C9E34_RS23075 () | 4434769..4435029 | + | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| C9E34_RS23080 () | 4435048..4435308 | + | 261 | WP_001303998.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| C9E34_RS23085 () | 4435464..4436204 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| C9E34_RS23090 () | 4436175..4436942 | - | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
| C9E34_RS23095 () | 4437047..4437625 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|