MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92729 bp
Accession: NZ_CP028699 Location: 1..92729 Organism: Escherichia coli strain 106 Replicon: plasmid pTA106
Accession: NZ_CP028699 Location: 1..92729 Organism: Escherichia coli strain 106 Replicon: plasmid pTA106
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E35_RS27610 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| C9E35_RS27625 () | 1782..2066 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C9E35_RS27630 () | 2066..2341 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E35_RS27635 () | 2436..2642 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| C9E35_RS27640 () | 2742..2957 | - | 216 | Protein_5 | transposase | - |
| C9E35_RS27645 () | 3001..3567 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| C9E35_RS27650 () | 3567..3983 | - | 417 | Protein_7 | IS91 family transposase | - |
| C9E35_RS27655 () | 3983..4168 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| C9E35_RS27660 () | 4345..6555 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| C9E35_RS27665 () | 6599..6988 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C9E35_RS27670 () | 7045..8033 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| C9E35_RS27680 () | 8214..12116 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| C9E35_RS27685 () | 12372..12853 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| C9E35_RS27695 () | 14295..15116 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C9E35_RS27700 () | 15116..16222 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C9E35_RS27705 () | 16312..18033 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C9E35_RS27710 () | 18107..19105 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C9E35_RS27715 () | 19158..19346 | + | 189 | Protein_18 | hypothetical protein | - |
| C9E35_RS27720 () | 19450..19536 | - | 87 | Protein_19 | IS3 family transposase ISEhe3 | Transposase |
| C9E35_RS27730 () | 19991..22687 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| C9E35_RS27735 () | 22774..23649 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| C9E35_RS27740 () | 23650..25617 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| C9E35_RS27745 () | 25617..27122 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| C9E35_RS27750 () | 27124..28347 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| C9E35_RS27755 () | 28378..28812 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| C9E35_RS27760 () | 28809..29363 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| C9E35_RS27765 () | 29378..29725 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| C9E35_RS27770 () | 29722..30321 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| C9E35_RS27775 () | 30318..31295 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| C9E35_RS27780 () | 31334..32506 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| C9E35_RS27785 () | 32493..33005 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| C9E35_RS27790 () | 33063..33896 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| C9E35_RS27795 () | 33988..34389 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| C9E35_RS27800 () | 34568..35739 | + | 1172 | Protein_34 | IS3 family transposase ISLad1 | Transposase |
| C9E35_RS27810 () | 36280..36795 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C9E35_RS27815 () | 36797..39793 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| C9E35_RS27820 () | 39843..41963 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C9E35_RS27825 () | 41967..43406 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| C9E35_RS28325 () | 43527..44019 | + | 493 | Protein_39 | Transcriptional repressor MprA | VF |
| C9E35_RS27845 () | 44150..44380 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| C9E35_RS27850 () | 44501..45241 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| C9E35_RS27855 () | 45526..46503 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| C9E35_RS27865 () | 46911..47111 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| C9E35_RS27870 () | 47108..47728 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| C9E35_RS27875 () | 47725..48408 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| C9E35_RS27880 () | 48867..49085 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C9E35_RS27885 () | 49087..49392 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C9E35_RS27890 () | 49393..50199 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| C9E35_RS27905 () | 52097..52435 | + | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| C9E35_RS27910 () | 53023..54189 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| C9E35_RS27915 () | 54189..55160 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C9E35_RS27940 () | 56460..58184 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| C9E35_RS27945 () | 58261..59163 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| C9E35_RS27950 () | 59167..59472 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| C9E35_RS27960 () | 59549..60232 | + | 684 | WP_000085945.1 | DNA methylase | - |
| C9E35_RS27965 () | 60233..60454 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| C9E35_RS27970 () | 60348..60902 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| C9E35_RS28330 () | 60948..61724 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| C9E35_RS27985 () | 62265..62567 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| C9E35_RS27990 () | 62614..63036 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| C9E35_RS27995 () | 63033..63224 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C9E35_RS28335 () | 63194..63703 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| C9E35_RS28010 () | 64220..64450 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C9E35_RS28015 () | 64502..65863 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| C9E35_RS28020 () | 65910..66473 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| C9E35_RS28025 () | 66559..67014 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| C9E35_RS28030 () | 67084..67290 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| C9E35_RS28035 () | 67316..67768 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| C9E35_RS28040 () | 67825..68058 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| C9E35_RS28045 () | 68124..70082 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| C9E35_RS28050 () | 70137..70571 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| C9E35_RS28055 () | 70568..71329 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 71298..71496 | + | 199 | NuclAT_0 | - | - |
| - () | 71298..71496 | + | 199 | NuclAT_0 | - | - |
| - () | 71298..71496 | + | 199 | NuclAT_0 | - | - |
| - () | 71298..71496 | + | 199 | NuclAT_0 | - | - |
| C9E35_RS28060 () | 71561..71719 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E35_RS28065 () | 71853..73874 | + | 2022 | Protein_75 | hypothetical protein | Relaxase |
| C9E35_RS28070 () | 73942..74373 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| C9E35_RS28080 () | 75045..75394 | - | 350 | Protein_77 | IS3 family transposase IS3H | Transposase |
| C9E35_RS28085 () | 75488..75751 | + | 264 | Protein_78 | IS21 family transposase ISEc62 | Transposase |
| C9E35_RS28090 () | 75791..75911 | + | 121 | Protein_79 | IS21 family transposase ISEc62 | Transposase |
| C9E35_RS28095 () | 75908..76060 | + | 153 | Protein_80 | IS1 family transposase | - |
| C9E35_RS28100 () | 76167..85676 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| C9E35_RS28105 () | 85750..85974 | + | 225 | Protein_82 | IS3 family transposase IS3H | Transposase |
| C9E35_RS28110 () | 86042..86212 | - | 171 | Protein_83 | IS3 family transposase IS1203 | Transposase |
| C9E35_RS28115 () | 86219..86470 | - | 252 | Protein_84 | IS3 family transposase IS1203 | Transposase |
| C9E35_RS28120 () | 86527..87915 | + | 1389 | Protein_85 | Multifunctional conjugation protein TraI | Relaxase |
| C9E35_RS28125 () | 87935..88681 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| C9E35_RS28130 () | 88740..89600 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| C9E35_RS28135 () | 89703..90263 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| C9E35_RS28140 () | 90396..90608 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| C9E35_RS28145 () | 90853..91314 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| C9E35_RS28150 () | 91360..91569 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| C9E35_RS28155 () | 91607..91945 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| C9E35_RS28160 () | 92185..92439 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|