MGE detailed information
MGE type: Genomic_island MGE length: 21234 bp
Accession: NZ_CP028698 Location: 4751308..4772541 Organism: Escherichia coli strain 106 Replicon: chromosome
Accession: NZ_CP028698 Location: 4751308..4772541 Organism: Escherichia coli strain 106 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E35_RS24460 () | 4747034..4747576 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| C9E35_RS24465 () | 4747869..4750019 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| C9E35_RS24470 () | 4750069..4750272 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| C9E35_RS24475 () | 4750283..4751239 | + | 957 | WP_001297640.1 | GTPase | - |
| C9E35_RS24480 () | 4751308..4752666 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| C9E35_RS24485 () | 4752675..4752959 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| C9E35_RS24490 () | 4753237..4755669 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| C9E35_RS24495 () | 4755736..4757205 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| C9E35_RS24500 () | 4757205..4758959 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4759109..4759185 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4759109..4759185 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4759109..4759185 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4759109..4759185 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4759109..4759185 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4759109..4759185 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4759109..4759185 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4759109..4759185 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| C9E35_RS24505 () | 4759180..4759521 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| C9E35_RS24510 () | 4759568..4760731 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| C9E35_RS24515 () | 4760779..4761660 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| C9E35_RS24520 () | 4761757..4761921 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| C9E35_RS24525 () | 4762098..4763510 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| C9E35_RS28315 () | 4763753..4763953 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| C9E35_RS24530 () | 4763958..4764710 | - | 753 | Protein_4670 | Recombination-promoting nuclease RpnD | VF |
| C9E35_RS24535 () | 4765177..4766409 | + | 1233 | WP_070081093.1 | multidrug efflux MFS transporter MdtM | - |
| C9E35_RS24540 () | 4766450..4767721 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| C9E35_RS24545 () | 4767837..4768988 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| C9E35_RS24550 () | 4768998..4769765 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| C9E35_RS24555 () | 4769762..4770028 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| C9E35_RS24560 () | 4770340..4772541 | + | 2202 | WP_000535071.1 | hypothetical protein | VF |
| C9E35_RS24570 () | 4772807..4773649 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| C9E35_RS24575 () | 4773717..4774895 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |