MGE detailed information
MGE type: Genomic_island MGE length: 21234 bp
Accession: NZ_CP028690 Location: 4755566..4776799 Organism: Escherichia coli strain 109 Replicon: chromosome
Accession: NZ_CP028690 Location: 4755566..4776799 Organism: Escherichia coli strain 109 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E38_RS24520 () | 4751292..4751834 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| C9E38_RS24525 () | 4752127..4754277 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| C9E38_RS24530 () | 4754327..4754530 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| C9E38_RS24535 () | 4754541..4755497 | + | 957 | WP_001297640.1 | GTPase | - |
| C9E38_RS24540 () | 4755566..4756924 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| C9E38_RS24545 () | 4756933..4757217 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| C9E38_RS24550 () | 4757495..4759927 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| C9E38_RS24555 () | 4759994..4761463 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| C9E38_RS24560 () | 4761463..4763217 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4763367..4763443 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4763367..4763443 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4763367..4763443 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4763367..4763443 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4763367..4763443 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4763367..4763443 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4763367..4763443 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4763367..4763443 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| C9E38_RS24565 () | 4763438..4763779 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| C9E38_RS24570 () | 4763826..4764989 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| C9E38_RS24575 () | 4765037..4765918 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| C9E38_RS24580 () | 4766015..4766179 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| C9E38_RS24585 () | 4766356..4767768 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| C9E38_RS28465 () | 4768011..4768211 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| C9E38_RS24590 () | 4768216..4768968 | - | 753 | Protein_4687 | hypothetical protein | VF |
| C9E38_RS24595 () | 4769435..4770667 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| C9E38_RS24600 () | 4770708..4771979 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| C9E38_RS24605 () | 4772095..4773246 | + | 1152 | WP_001302771.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| C9E38_RS24610 () | 4773256..4774023 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| C9E38_RS24615 () | 4774020..4774286 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| C9E38_RS24620 () | 4774598..4776799 | + | 2202 | WP_000535071.1 | hypothetical protein | VF |
| C9E38_RS24630 () | 4777065..4777907 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| C9E38_RS24635 () | 4777975..4779153 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |