NZ_CP0286891..92718

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 92718 bp
Accession: NZ_CP028689        Location: 1..92718         Organism: Escherichia coli strain 110       Replicon: plasmid pTA110


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C9E39_RS27735 () 13..870 + 858 WP_000130945.1 incFII family plasmid replication initiator RepA -
C9E39_RS27750 () 1782..2066 + 285 WP_001178089.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
C9E39_RS27755 () 2066..2341 + 276 WP_000421248.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
C9E39_RS27760 () 2436..2642 + 207 WP_001105064.1 hypothetical protein -
C9E39_RS27765 () 2742..2957 - 216 Protein_5 transposase -
C9E39_RS27770 () 3001..3567 - 567 Protein_6 IS3 family transposase ISSd1 Transposase
C9E39_RS27775 () 3567..3983 - 417 Protein_7 IS91 family transposase -
C9E39_RS27780 () 3983..4168 - 186 WP_001302179.1 hypothetical protein -
C9E39_RS27785 () 4345..6555 + 2211 WP_000592771.1 Catalase-peroxidase VF
C9E39_RS27790 () 6599..6988 + 390 WP_001172748.1 cytochrome b562 family protein -
C9E39_RS27795 () 7045..8033 + 989 Protein_11 IS3 family transposase IS629 Transposase
C9E39_RS27805 () 8214..12116 + 3903 WP_001034100.1 hypothetical protein VF
C9E39_RS27810 () 12372..12853 - 482 Protein_13 IS1 family transposase IS1N Transposase
C9E39_RS27820 () 14295..15116 + 822 WP_001302199.1 polysaccharide deacetylase family protein -
C9E39_RS27825 () 15116..16222 + 1107 WP_000975743.1 glycosyltransferase family 4 protein -
C9E39_RS27830 () 16312..18033 + 1722 WP_000550559.1 phosphoethanolamine transferase CptA -
C9E39_RS27835 () 18107..19105 + 999 WP_001302181.1 Lipid A biosynthesis myristoyltransferase VF
C9E39_RS27840 () 19158..19346 + 189 Protein_18 hypothetical protein -
C9E39_RS27845 () 19450..19536 - 87 Protein_19 IS3 family transposase ISEhe3 Transposase
C9E39_RS27860 () 19993..22689 + 2697 WP_001358886.1 hypothetical protein VF
C9E39_RS27865 () 22776..23651 + 876 WP_001302175.1 hypothetical protein VF
C9E39_RS27870 () 23652..25619 + 1968 WP_001302177.1 hypothetical protein VF
C9E39_RS27875 () 25619..27124 + 1506 WP_000092338.1 hypothetical protein VF
C9E39_RS27880 () 27126..28349 + 1224 WP_001173152.1 hypothetical protein VF
C9E39_RS27885 () 28380..28814 + 435 WP_001231211.1 hypothetical protein VF
C9E39_RS27890 () 28811..29365 + 555 WP_000082929.1 hypothetical protein VF
C9E39_RS27895 () 29380..29727 + 348 WP_000173396.1 hypothetical protein VF
C9E39_RS27900 () 29724..30323 + 600 WP_000082782.1 hypothetical protein VF
C9E39_RS27905 () 30320..31297 + 978 WP_000776550.1 hypothetical protein VF
C9E39_RS27910 () 31336..32508 + 1173 WP_071525076.1 hypothetical protein VF
C9E39_RS27915 () 32495..33007 + 513 WP_001004187.1 hypothetical protein VF
C9E39_RS27920 () 33065..33898 + 834 WP_000096786.1 hypothetical protein VF
C9E39_RS27925 () 33990..34391 + 402 WP_000971918.1 GspS family T2SS pilot lipoprotein variant EptO -
C9E39_RS27930 () 34570..35741 + 1172 Protein_34 IS3 family transposase ISLad1 Transposase
C9E39_RS27940 () 36282..36797 + 516 WP_000839950.1 hypothetical protein VF
C9E39_RS27945 () 36799..39795 + 2997 WP_000217739.1 hypothetical protein VF
C9E39_RS27950 () 39845..41965 + 2121 WP_000987091.1 Vitamin B12 import ATP-binding protein BtuD VF
C9E39_RS27955 () 41969..43408 + 1440 WP_001213545.1 hypothetical protein VF
C9E39_RS28480 () 43529..44021 + 493 Protein_39 hypothetical protein VF
C9E39_RS27975 () 44152..44382 + 231 WP_010891288.1 hypothetical protein -
C9E39_RS27980 () 44503..45243 + 741 WP_001066920.1 IS91 family transposase ISMno23 Transposase
C9E39_RS27985 () 45528..46505 - 978 WP_000361615.1 RepB family plasmid replication initiator protein -
C9E39_RS27995 () 46913..47113 - 201 WP_000708307.1 hypothetical protein -
C9E39_RS28000 () 47110..47730 - 621 WP_001248529.1 hypothetical protein -
C9E39_RS28005 () 47727..48410 - 684 WP_010891291.1 DNA-binding protein -
C9E39_RS28010 () 48869..49087 + 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
C9E39_RS28015 () 49089..49394 + 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
C9E39_RS28020 () 49395..50201 + 807 WP_000016989.1 site-specific integrase -
C9E39_RS28035 () 52099..52437 + 339 WP_071525396.1 RepB family plasmid replication initiator protein -
C9E39_RS28040 () 53025..54191 + 1167 WP_000772446.1 hypothetical protein VF
C9E39_RS28045 () 54191..55162 + 972 WP_000817031.1 ParB/RepB/Spo0J family plasmid partition protein -
C9E39_RS28070 () 56462..58186 + 1725 WP_000138832.1 group II intron reverse transcriptase/maturase -
C9E39_RS28075 () 58263..59165 + 903 WP_000273919.1 DUF1281 domain-containing protein -
C9E39_RS28080 () 59169..59474 + 306 WP_010891292.1 hypothetical protein -
C9E39_RS28090 () 59551..60234 + 684 WP_000085945.1 DNA methylase -
C9E39_RS28095 () 60235..60456 + 222 WP_001104869.1 hypothetical protein -
C9E39_RS28100 () 60350..60904 + 555 WP_001358893.1 DUF1380 family protein -
C9E39_RS28485 () 60950..61726 + 777 WP_001005037.1 hypothetical protein -
C9E39_RS28115 () 62267..62569 + 303 WP_010891293.1 antirestriction protein -
C9E39_RS28120 () 62616..63038 + 423 WP_000271685.1 DUF1380 family protein -
C9E39_RS28125 () 63035..63226 + 192 WP_001027495.1 hypothetical protein -
C9E39_RS28490 () 63196..63705 - 510 WP_032245379.1 hypothetical protein -
C9E39_RS28140 () 64222..64452 + 231 WP_000218642.1 hypothetical protein -
C9E39_RS28145 () 64504..65865 + 1362 WP_000199442.1 DUF3560 domain-containing protein -
C9E39_RS28150 () 65912..66475 + 564 WP_001302171.1 class I SAM-dependent methyltransferase -
C9E39_RS28155 () 66561..67010 - 450 WP_001451816.1 hypothetical protein -
C9E39_RS28160 () 67080..67286 + 207 WP_000547965.1 hypothetical protein -
C9E39_RS28165 () 67312..67764 + 453 WP_000290823.1 single-stranded DNA-binding protein -
C9E39_RS28170 () 67821..68054 + 234 WP_000005995.1 DUF905 family protein -
C9E39_RS28175 () 68120..70078 + 1959 WP_000117168.1 ParB/RepB/Spo0J family partition protein -
C9E39_RS28180 () 70133..70567 + 435 WP_000845908.1 conjugation system SOS inhibitor PsiB -
C9E39_RS28185 () 70564..71325 + 762 WP_001276250.1 plasmid SOS inhibition protein A -
- () 71294..71492 + 199 NuclAT_0 - -
- () 71294..71492 + 199 NuclAT_0 - -
- () 71294..71492 + 199 NuclAT_0 - -
- () 71294..71492 + 199 NuclAT_0 - -
C9E39_RS28190 () 71557..71715 + 159 WP_001302184.1 type I toxin-antitoxin system Hok family toxin -
C9E39_RS28195 () 71849..73870 + 2022 Protein_75 hypothetical protein Relaxase
C9E39_RS28200 () 73938..74369 + 432 WP_001453090.1 hypothetical protein -
C9E39_RS28210 () 75034..75383 - 350 Protein_77 IS3 family transposase IS3H Transposase
C9E39_RS28215 () 75477..75740 + 264 Protein_78 IS21 family transposase ISEc62 Transposase
C9E39_RS28220 () 75780..75900 + 121 Protein_79 IS21 family transposase ISEc62 Transposase
C9E39_RS28225 () 75897..76049 + 153 Protein_80 IS1 family transposase -
C9E39_RS28230 () 76156..85665 + 9510 WP_000581721.1 Toxin B VF
C9E39_RS28235 () 85739..85963 + 225 Protein_82 IS3 family transposase IS3H Transposase
C9E39_RS28240 () 86031..86201 - 171 Protein_83 IS3 family transposase IS1203 Transposase
C9E39_RS28245 () 86208..86459 - 252 Protein_84 IS3 family transposase IS1203 Transposase
C9E39_RS28250 () 86516..87904 + 1389 Protein_85 hypothetical protein Relaxase
C9E39_RS28255 () 87924..88670 + 747 WP_000205762.1 conjugal transfer pilus acetylase TraX -
C9E39_RS28260 () 88729..89589 + 861 WP_000704522.1 hypothetical protein VF
C9E39_RS28265 () 89692..90252 + 561 WP_000840472.1 fertility inhibition protein FinO -
C9E39_RS28270 () 90385..90597 + 213 WP_001302189.1 ANR family transcriptional regulator -
C9E39_RS28275 () 90842..91303 + 462 WP_001233853.1 thermonuclease family protein -
C9E39_RS28280 () 91349..91558 + 210 WP_001302200.1 hemolysin expression modulator Hha -
C9E39_RS28285 () 91596..91934 + 339 WP_000766796.1 hypothetical protein -
C9E39_RS28290 () 92174..92428 + 255 WP_000083831.1 replication regulatory protein RepA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance