MGE detailed information
MGE type: Genomic_island MGE length: 21234 bp
Accession: NZ_CP028687 Location: 4755565..4776798 Organism: Escherichia coli strain 110 Replicon: chromosome
Accession: NZ_CP028687 Location: 4755565..4776798 Organism: Escherichia coli strain 110 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E39_RS24520 () | 4751291..4751833 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| C9E39_RS24525 () | 4752126..4754276 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| C9E39_RS24530 () | 4754326..4754529 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| C9E39_RS24535 () | 4754540..4755496 | + | 957 | WP_001297640.1 | GTPase | - |
| C9E39_RS24540 () | 4755565..4756923 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| C9E39_RS24545 () | 4756932..4757216 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| C9E39_RS24550 () | 4757494..4759926 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| C9E39_RS24555 () | 4759993..4761462 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| C9E39_RS24560 () | 4761462..4763216 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4763366..4763442 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4763366..4763442 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4763366..4763442 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4763366..4763442 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4763366..4763442 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4763366..4763442 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4763366..4763442 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4763366..4763442 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| C9E39_RS24565 () | 4763437..4763778 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| C9E39_RS24570 () | 4763825..4764988 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| C9E39_RS24575 () | 4765036..4765917 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| C9E39_RS24580 () | 4766014..4766178 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| C9E39_RS24585 () | 4766355..4767767 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| C9E39_RS28470 () | 4768010..4768210 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| C9E39_RS24590 () | 4768215..4768967 | - | 753 | Protein_4686 | Recombination-promoting nuclease RpnD | VF |
| C9E39_RS24595 () | 4769434..4770666 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| C9E39_RS24600 () | 4770707..4771978 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| C9E39_RS24605 () | 4772094..4773245 | + | 1152 | WP_001302771.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| C9E39_RS24610 () | 4773255..4774022 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| C9E39_RS24615 () | 4774019..4774285 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| C9E39_RS24620 () | 4774597..4776798 | + | 2202 | WP_000535071.1 | hypothetical protein | VF |
| C9E39_RS24630 () | 4777064..4777906 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| C9E39_RS24635 () | 4777974..4779152 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |