MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP028685 Location: 4820971..4842198 Organism: Escherichia coli strain 111 Replicon: chromosome
Accession: NZ_CP028685 Location: 4820971..4842198 Organism: Escherichia coli strain 111 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E40_RS24965 () | 4816697..4817239 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| C9E40_RS24970 () | 4817532..4819682 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| C9E40_RS24975 () | 4819732..4819935 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| C9E40_RS24980 () | 4819946..4820902 | + | 957 | WP_001297640.1 | GTPase | - |
| C9E40_RS24985 () | 4820971..4822329 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| C9E40_RS24990 () | 4822338..4822622 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| C9E40_RS24995 () | 4822900..4825332 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| C9E40_RS25000 () | 4825399..4826868 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| C9E40_RS25005 () | 4826868..4828622 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4828772..4828848 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4828772..4828848 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4828772..4828848 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4828772..4828848 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4828772..4828848 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4828772..4828848 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4828772..4828848 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4828772..4828848 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| C9E40_RS25010 () | 4828843..4829184 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| C9E40_RS25015 () | 4829231..4830394 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| C9E40_RS25020 () | 4830442..4831323 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| C9E40_RS25025 () | 4831420..4831584 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| C9E40_RS25030 () | 4831761..4833173 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| C9E40_RS28845 () | 4833416..4833616 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| C9E40_RS25035 () | 4833621..4834373 | - | 753 | Protein_4769 | Recombination-promoting nuclease RpnD | VF |
| C9E40_RS25040 () | 4834840..4836072 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| C9E40_RS25045 () | 4836113..4837384 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| C9E40_RS25050 () | 4837500..4838651 | + | 1152 | WP_001302771.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| C9E40_RS25055 () | 4838661..4839428 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| C9E40_RS25060 () | 4839425..4839691 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| C9E40_RS25065 () | 4840003..4842198 | + | 2196 | WP_000535069.1 | hypothetical protein | VF |
| C9E40_RS25075 () | 4842464..4843306 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| C9E40_RS25080 () | 4843374..4844552 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |