MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92725 bp
Accession: NZ_CP028684 Location: 1..92725 Organism: Escherichia coli strain 112 Replicon: plasmid pTA112
Accession: NZ_CP028684 Location: 1..92725 Organism: Escherichia coli strain 112 Replicon: plasmid pTA112
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E41_RS28110 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| C9E41_RS28125 () | 1782..2066 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C9E41_RS28130 () | 2066..2341 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E41_RS28135 () | 2436..2642 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| C9E41_RS28140 () | 2742..2957 | - | 216 | Protein_5 | transposase | - |
| C9E41_RS28145 () | 3001..3567 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| C9E41_RS28150 () | 3567..3983 | - | 417 | Protein_7 | IS91 family transposase | - |
| C9E41_RS28155 () | 3983..4168 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| C9E41_RS28160 () | 4345..6555 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| C9E41_RS28165 () | 6599..6988 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C9E41_RS28170 () | 7045..8033 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| C9E41_RS28180 () | 8214..12116 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| C9E41_RS28185 () | 12372..12853 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| C9E41_RS28195 () | 14295..15116 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C9E41_RS28200 () | 15116..16222 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C9E41_RS28205 () | 16312..18033 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C9E41_RS28210 () | 18107..19105 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C9E41_RS28215 () | 19158..19346 | + | 189 | Protein_18 | hypothetical protein | - |
| C9E41_RS28220 () | 19450..19536 | - | 87 | Protein_19 | IS3 family transposase ISEhe3 | Transposase |
| C9E41_RS28230 () | 19987..22683 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| C9E41_RS28235 () | 22770..23645 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| C9E41_RS28240 () | 23646..25613 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| C9E41_RS28245 () | 25613..27118 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| C9E41_RS28250 () | 27120..28343 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| C9E41_RS28255 () | 28374..28808 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| C9E41_RS28260 () | 28805..29359 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| C9E41_RS28265 () | 29374..29721 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| C9E41_RS28270 () | 29718..30317 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| C9E41_RS28275 () | 30314..31291 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| C9E41_RS28280 () | 31330..32502 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| C9E41_RS28285 () | 32489..33001 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| C9E41_RS28290 () | 33059..33892 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| C9E41_RS28295 () | 33984..34385 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| C9E41_RS28300 () | 34564..35735 | + | 1172 | Protein_34 | IS3 family transposase ISLad1 | Transposase |
| C9E41_RS28310 () | 36276..36791 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C9E41_RS28315 () | 36793..39789 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| C9E41_RS28320 () | 39839..41959 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C9E41_RS28325 () | 41963..43402 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| C9E41_RS28850 () | 43523..44015 | + | 493 | Protein_39 | Transcriptional repressor MprA | VF |
| C9E41_RS28345 () | 44146..44376 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| C9E41_RS28350 () | 44497..45237 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| C9E41_RS28355 () | 45522..46499 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| C9E41_RS28365 () | 46907..47107 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| C9E41_RS28370 () | 47104..47724 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| C9E41_RS28375 () | 47721..48404 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| C9E41_RS28380 () | 48863..49081 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C9E41_RS28385 () | 49083..49388 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C9E41_RS28390 () | 49389..50195 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| C9E41_RS28405 () | 52093..52431 | + | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| C9E41_RS28410 () | 53019..54185 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| C9E41_RS28415 () | 54185..55156 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C9E41_RS28440 () | 56456..58180 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| C9E41_RS28445 () | 58257..59159 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| C9E41_RS28450 () | 59163..59468 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| C9E41_RS28460 () | 59545..60228 | + | 684 | WP_000085945.1 | DNA methylase | - |
| C9E41_RS28465 () | 60229..60450 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| C9E41_RS28470 () | 60344..60898 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| C9E41_RS28855 () | 60944..61720 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| C9E41_RS28485 () | 62261..62563 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| C9E41_RS28490 () | 62610..63032 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| C9E41_RS28495 () | 63029..63220 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C9E41_RS28860 () | 63190..63699 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| C9E41_RS28510 () | 64216..64446 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C9E41_RS28515 () | 64498..65859 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| C9E41_RS28520 () | 65906..66469 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| C9E41_RS28525 () | 66555..67010 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| C9E41_RS28530 () | 67080..67286 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| C9E41_RS28535 () | 67312..67764 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| C9E41_RS28540 () | 67821..68054 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| C9E41_RS28545 () | 68120..70078 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| C9E41_RS28550 () | 70133..70567 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| C9E41_RS28555 () | 70564..71325 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 71294..71492 | + | 199 | NuclAT_0 | - | - |
| - () | 71294..71492 | + | 199 | NuclAT_0 | - | - |
| - () | 71294..71492 | + | 199 | NuclAT_0 | - | - |
| - () | 71294..71492 | + | 199 | NuclAT_0 | - | - |
| C9E41_RS28560 () | 71557..71715 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E41_RS28565 () | 71849..73870 | + | 2022 | Protein_75 | hypothetical protein | Relaxase |
| C9E41_RS28570 () | 73938..74369 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| C9E41_RS28580 () | 75041..75390 | - | 350 | Protein_77 | IS3 family transposase IS3H | Transposase |
| C9E41_RS28585 () | 75484..75747 | + | 264 | Protein_78 | IS21 family transposase ISEc62 | Transposase |
| C9E41_RS28590 () | 75787..75907 | + | 121 | Protein_79 | IS21 family transposase ISEc62 | Transposase |
| C9E41_RS28595 () | 75904..76056 | + | 153 | Protein_80 | IS1 family transposase | - |
| C9E41_RS28600 () | 76163..85672 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| C9E41_RS28605 () | 85746..85970 | + | 225 | Protein_82 | IS3 family transposase IS3H | Transposase |
| C9E41_RS28610 () | 86038..86208 | - | 171 | Protein_83 | IS3 family transposase IS1203 | Transposase |
| C9E41_RS28615 () | 86215..86466 | - | 252 | Protein_84 | IS3 family transposase IS1203 | Transposase |
| C9E41_RS28620 () | 86523..87911 | + | 1389 | Protein_85 | Multifunctional conjugation protein TraI | Relaxase |
| C9E41_RS28625 () | 87931..88677 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| C9E41_RS28630 () | 88736..89596 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| C9E41_RS28635 () | 89699..90259 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| C9E41_RS28640 () | 90392..90604 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| C9E41_RS28645 () | 90849..91310 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| C9E41_RS28650 () | 91356..91565 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| C9E41_RS28655 () | 91603..91941 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| C9E41_RS28660 () | 92181..92435 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|