MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP028683 Location: 4820983..4842210 Organism: Escherichia coli strain 112 Replicon: chromosome
Accession: NZ_CP028683 Location: 4820983..4842210 Organism: Escherichia coli strain 112 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E41_RS24965 () | 4816709..4817251 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| C9E41_RS24970 () | 4817544..4819694 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| C9E41_RS24975 () | 4819744..4819947 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| C9E41_RS24980 () | 4819958..4820914 | + | 957 | WP_001297640.1 | GTPase | - |
| C9E41_RS24985 () | 4820983..4822341 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| C9E41_RS24990 () | 4822350..4822634 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| C9E41_RS24995 () | 4822912..4825344 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| C9E41_RS25000 () | 4825411..4826880 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| C9E41_RS25005 () | 4826880..4828634 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4828784..4828860 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4828784..4828860 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4828784..4828860 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4828784..4828860 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4828784..4828860 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4828784..4828860 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4828784..4828860 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4828784..4828860 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| C9E41_RS25010 () | 4828855..4829196 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| C9E41_RS25015 () | 4829243..4830406 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| C9E41_RS25020 () | 4830454..4831335 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| C9E41_RS25025 () | 4831432..4831596 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| C9E41_RS25030 () | 4831773..4833185 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| C9E41_RS28840 () | 4833428..4833628 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| C9E41_RS25035 () | 4833633..4834385 | - | 753 | Protein_4770 | Recombination-promoting nuclease RpnD | VF |
| C9E41_RS25040 () | 4834852..4836084 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| C9E41_RS25045 () | 4836125..4837396 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| C9E41_RS25050 () | 4837512..4838663 | + | 1152 | WP_001302771.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| C9E41_RS25055 () | 4838673..4839440 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| C9E41_RS25060 () | 4839437..4839703 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| C9E41_RS25065 () | 4840015..4842210 | + | 2196 | WP_000535069.1 | hypothetical protein | VF |
| C9E41_RS25075 () | 4842476..4843318 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| C9E41_RS25080 () | 4843386..4844564 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |