MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93174 bp
Accession: NZ_CP028676 Location: 1..93174 Organism: Escherichia coli strain 115 Replicon: plasmid pTA115
Accession: NZ_CP028676 Location: 1..93174 Organism: Escherichia coli strain 115 Replicon: plasmid pTA115
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E44_RS27365 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| C9E44_RS27380 () | 1781..2065 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C9E44_RS27385 () | 2065..2340 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E44_RS27390 () | 2435..2641 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| C9E44_RS27395 () | 2741..2956 | - | 216 | Protein_5 | transposase | - |
| C9E44_RS27400 () | 3000..3566 | - | 567 | Protein_6 | IS3-like element IS600 family transposase | - |
| C9E44_RS27405 () | 3566..3982 | - | 417 | Protein_7 | IS91 family transposase | - |
| C9E44_RS27410 () | 3982..4167 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| C9E44_RS27415 () | 4344..6554 | + | 2211 | WP_000592771.1 | catalase/peroxidase KatP | - |
| C9E44_RS27420 () | 6598..6987 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C9E44_RS27425 () | 7044..8032 | + | 989 | Protein_11 | IS3 family transposase | - |
| C9E44_RS27435 () | 8213..12115 | + | 3903 | WP_001034097.1 | serine protease autotransporter EspP | - |
| C9E44_RS27440 () | 12371..12852 | - | 482 | Protein_13 | IS1 family transposase | - |
| C9E44_RS27450 () | 14293..15114 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C9E44_RS27455 () | 15114..16220 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C9E44_RS27460 () | 16310..18031 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C9E44_RS27465 () | 18105..19103 | + | 999 | WP_001302181.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| C9E44_RS27470 () | 19156..19344 | + | 189 | Protein_18 | hypothetical protein | - |
| C9E44_RS27475 () | 19448..19534 | - | 87 | Protein_19 | transposase | - |
| C9E44_RS27490 () | 19988..22684 | + | 2697 | WP_072141201.1 | metalloprotease StcE | - |
| C9E44_RS27495 () | 22771..23646 | + | 876 | WP_001302175.1 | type II secretion system protein GspC | - |
| C9E44_RS27500 () | 23647..25614 | + | 1968 | WP_001302177.1 | variant type II secretion system secretin EtpD | - |
| C9E44_RS27505 () | 25614..27119 | + | 1506 | WP_000092338.1 | type II secretion system ATPase GspE | - |
| C9E44_RS27510 () | 27121..28344 | + | 1224 | WP_001173152.1 | type II secretion system inner membrane protein GspF | - |
| C9E44_RS27515 () | 28375..28809 | + | 435 | WP_001231211.1 | type II secretion system major pseudopilin GspG | - |
| C9E44_RS27520 () | 28806..29360 | + | 555 | WP_000082929.1 | type II secretion system minor pseudopilin GspH | - |
| C9E44_RS27525 () | 29375..29722 | + | 348 | WP_000173396.1 | type II secretion system minor pseudopilin GspI | - |
| C9E44_RS27530 () | 29719..30318 | + | 600 | WP_000082782.1 | type II secretion system minor pseudopilin GspJ | - |
| C9E44_RS27535 () | 30315..31292 | + | 978 | WP_000776550.1 | type II secretion system minor pseudopilin GspK | - |
| C9E44_RS27540 () | 31331..32503 | + | 1173 | WP_071525076.1 | type II secretion system protein GspL | - |
| C9E44_RS27545 () | 32490..33002 | + | 513 | WP_001004187.1 | type II secretion system protein M | - |
| C9E44_RS27550 () | 33060..33893 | + | 834 | WP_000096786.1 | A24 family peptidase | - |
| C9E44_RS27555 () | 33985..34386 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| C9E44_RS27560 () | 34565..35736 | + | 1172 | Protein_34 | IS3 family transposase | - |
| C9E44_RS27570 () | 36277..36792 | + | 516 | WP_000839950.1 | enterohemolysin-activating lysine-acyltransferase EhxC | - |
| C9E44_RS27575 () | 36794..39790 | + | 2997 | WP_000217739.1 | enterohemolysin EhxA | - |
| C9E44_RS27580 () | 39840..41960 | + | 2121 | WP_000987091.1 | enterohemolysin T1SS ABC transporter permease/ATPase EhxB | - |
| C9E44_RS27585 () | 41964..43403 | + | 1440 | WP_001213545.1 | enterohemolysin T1SS ABC transporter subunit EhxD | - |
| C9E44_RS28100 () | 43524..44016 | + | 493 | Protein_39 | MarR family transcriptional regulator | - |
| C9E44_RS27605 () | 44147..44377 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| C9E44_RS27610 () | 44498..45238 | + | 741 | WP_001066920.1 | tyrosine-type recombinase/integrase | - |
| C9E44_RS27615 () | 45523..46500 | - | 978 | WP_001508846.1 | RepB family plasmid replication initiator protein | - |
| C9E44_RS27625 () | 46908..47108 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| C9E44_RS27630 () | 47105..47725 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| C9E44_RS27635 () | 47722..48405 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| C9E44_RS27640 () | 48864..49082 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C9E44_RS27645 () | 49084..49389 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C9E44_RS27650 () | 49390..50196 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| C9E44_RS27665 () | 52208..52963 | + | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| C9E44_RS27670 () | 53551..54717 | + | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| C9E44_RS27675 () | 54717..55688 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C9E44_RS27685 () | 56297..57199 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| C9E44_RS27690 () | 57203..57508 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| C9E44_RS27695 () | 57585..58268 | + | 684 | WP_000085945.1 | DNA methylase | - |
| C9E44_RS27700 () | 58269..58490 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| C9E44_RS27705 () | 58384..58938 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| C9E44_RS28105 () | 58984..59760 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| C9E44_RS27720 () | 60301..60603 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| C9E44_RS27725 () | 60650..61072 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| C9E44_RS27730 () | 61069..61260 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C9E44_RS28110 () | 61230..61739 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| C9E44_RS27745 () | 62256..62486 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C9E44_RS27750 () | 62538..63899 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| C9E44_RS27755 () | 63946..64509 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| C9E44_RS27760 () | 64595..65044 | - | 450 | WP_001451816.1 | hypothetical protein | - |
| C9E44_RS27765 () | 65114..65320 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| C9E44_RS27770 () | 65346..65798 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| C9E44_RS27775 () | 65855..66088 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| C9E44_RS27780 () | 66154..68112 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| C9E44_RS27785 () | 68167..68601 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| C9E44_RS27790 () | 68598..69359 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 69328..69526 | + | 199 | NuclAT_0 | - | - |
| - () | 69328..69526 | + | 199 | NuclAT_0 | - | - |
| - () | 69328..69526 | + | 199 | NuclAT_0 | - | - |
| - () | 69328..69526 | + | 199 | NuclAT_0 | - | - |
| C9E44_RS27795 () | 69591..69749 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E44_RS27800 () | 69883..71904 | + | 2022 | Protein_74 | relaxase/mobilization nuclease domain-containing protein | - |
| C9E44_RS27805 () | 71972..72403 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| C9E44_RS27815 () | 73040..73389 | - | 350 | Protein_76 | IS3 family transposase | - |
| C9E44_RS27820 () | 73483..73746 | + | 264 | Protein_77 | IS21 family transposase | - |
| C9E44_RS27825 () | 73786..73906 | + | 121 | Protein_78 | ATP-binding protein | - |
| C9E44_RS27830 () | 73903..74055 | + | 153 | Protein_79 | IS1 family transposase | - |
| C9E44_RS27835 () | 74162..83671 | + | 9510 | WP_000581719.1 | toxin B | - |
| C9E44_RS27840 () | 83745..83969 | + | 225 | Protein_81 | IS3 family transposase | - |
| C9E44_RS27845 () | 84037..84207 | - | 171 | Protein_82 | ATP-binding protein | - |
| C9E44_RS27850 () | 84214..84465 | - | 252 | Protein_83 | transposase | - |
| C9E44_RS27855 () | 84666..85046 | + | 381 | WP_001171554.1 | IS66 family insertion sequence hypothetical protein | - |
| C9E44_RS27860 () | 85043..85390 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C9E44_RS27865 () | 85440..86978 | + | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| C9E44_RS27870 () | 87029..88360 | + | 1332 | Protein_87 | conjugative transfer relaxase/helicase TraI | - |
| C9E44_RS27875 () | 88380..89126 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| C9E44_RS27880 () | 89185..90045 | + | 861 | WP_000704522.1 | alpha/beta hydrolase | - |
| C9E44_RS27885 () | 90148..90708 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| C9E44_RS27890 () | 90841..91053 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| C9E44_RS27895 () | 91298..91759 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| C9E44_RS27900 () | 91805..92014 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| C9E44_RS27905 () | 92052..92390 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| C9E44_RS27910 () | 92630..92884 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|