MGE detailed information
MGE type: Genomic_island MGE length: 21219 bp
Accession: NZ_CP028674 Location: 4696885..4718103 Organism: Escherichia coli strain 115 Replicon: chromosome
Accession: NZ_CP028674 Location: 4696885..4718103 Organism: Escherichia coli strain 115 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E44_RS24015 () | 4692611..4693153 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| C9E44_RS24020 () | 4693446..4695596 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| C9E44_RS24025 () | 4695646..4695849 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| C9E44_RS24030 () | 4695860..4696816 | + | 957 | WP_001297640.1 | GTPase | - |
| C9E44_RS24035 () | 4696885..4698243 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| C9E44_RS24040 () | 4698252..4698536 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| C9E44_RS24045 () | 4698814..4701246 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| C9E44_RS24050 () | 4701313..4702782 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| C9E44_RS24055 () | 4702782..4704536 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4704686..4704762 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4704686..4704762 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4704686..4704762 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4704686..4704762 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4704686..4704762 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4704686..4704762 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4704686..4704762 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4704686..4704762 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| C9E44_RS24060 () | 4704757..4705098 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| C9E44_RS24065 () | 4705145..4706308 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| C9E44_RS24070 () | 4706356..4707237 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| C9E44_RS24075 () | 4707334..4707498 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| C9E44_RS24080 () | 4707675..4709087 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| C9E44_RS28080 () | 4709330..4709530 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| C9E44_RS24085 () | 4709535..4710287 | - | 753 | Protein_4596 | Recombination-promoting nuclease RpnD | VF |
| C9E44_RS24090 () | 4710754..4711986 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| C9E44_RS24095 () | 4712027..4713298 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| C9E44_RS24100 () | 4713414..4714565 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| C9E44_RS24105 () | 4714575..4715342 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| C9E44_RS24110 () | 4715339..4715605 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| C9E44_RS24115 () | 4715917..4718103 | + | 2187 | WP_000535053.1 | hypothetical protein | VF |
| C9E44_RS24125 () | 4718369..4719211 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| C9E44_RS24130 () | 4719279..4720457 | + | 1179 | WP_137049517.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |