MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93184 bp
Accession: NZ_CP028673 Location: 1..93184 Organism: Escherichia coli strain 116 Replicon: plasmid pTA116
Accession: NZ_CP028673 Location: 1..93184 Organism: Escherichia coli strain 116 Replicon: plasmid pTA116
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E45_RS27820 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| C9E45_RS27835 () | 1781..2065 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C9E45_RS27840 () | 2065..2340 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E45_RS27845 () | 2435..2641 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| C9E45_RS27850 () | 2741..2956 | - | 216 | Protein_5 | transposase | - |
| C9E45_RS27855 () | 3000..3566 | - | 567 | Protein_6 | IS3-like element IS600 family transposase | - |
| C9E45_RS27860 () | 3566..3982 | - | 417 | Protein_7 | IS91 family transposase | - |
| C9E45_RS27865 () | 3982..4167 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| C9E45_RS27870 () | 4344..6554 | + | 2211 | WP_000592771.1 | catalase/peroxidase KatP | - |
| C9E45_RS27875 () | 6598..6987 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C9E45_RS27880 () | 7044..8032 | + | 989 | Protein_11 | IS3 family transposase | - |
| C9E45_RS27890 () | 8213..12115 | + | 3903 | WP_001034097.1 | serine protease autotransporter EspP | - |
| C9E45_RS27895 () | 12371..12852 | - | 482 | Protein_13 | IS1 family transposase | - |
| C9E45_RS27905 () | 14293..15114 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C9E45_RS27910 () | 15114..16220 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C9E45_RS27915 () | 16310..18031 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C9E45_RS27920 () | 18105..19103 | + | 999 | WP_001302181.1 | lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase | - |
| C9E45_RS27925 () | 19156..19344 | + | 189 | Protein_18 | hypothetical protein | - |
| C9E45_RS27930 () | 19448..19534 | - | 87 | Protein_19 | transposase | - |
| C9E45_RS27940 () | 19998..22694 | + | 2697 | WP_072141201.1 | metalloprotease StcE | - |
| C9E45_RS27945 () | 22781..23656 | + | 876 | WP_001302175.1 | type II secretion system protein GspC | - |
| C9E45_RS27950 () | 23657..25624 | + | 1968 | WP_001302177.1 | variant type II secretion system secretin EtpD | - |
| C9E45_RS27955 () | 25624..27129 | + | 1506 | WP_000092338.1 | type II secretion system ATPase GspE | - |
| C9E45_RS27960 () | 27131..28354 | + | 1224 | WP_001173152.1 | type II secretion system inner membrane protein GspF | - |
| C9E45_RS27965 () | 28385..28819 | + | 435 | WP_001231211.1 | type II secretion system major pseudopilin GspG | - |
| C9E45_RS27970 () | 28816..29370 | + | 555 | WP_000082929.1 | type II secretion system minor pseudopilin GspH | - |
| C9E45_RS27975 () | 29385..29732 | + | 348 | WP_000173396.1 | type II secretion system minor pseudopilin GspI | - |
| C9E45_RS27980 () | 29729..30328 | + | 600 | WP_000082782.1 | type II secretion system minor pseudopilin GspJ | - |
| C9E45_RS27985 () | 30325..31302 | + | 978 | WP_000776550.1 | type II secretion system minor pseudopilin GspK | - |
| C9E45_RS27990 () | 31341..32513 | + | 1173 | WP_071525076.1 | type II secretion system protein GspL | - |
| C9E45_RS27995 () | 32500..33012 | + | 513 | WP_001004187.1 | type II secretion system protein M | - |
| C9E45_RS28000 () | 33070..33903 | + | 834 | WP_000096786.1 | A24 family peptidase | - |
| C9E45_RS28005 () | 33995..34396 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| C9E45_RS28010 () | 34575..35746 | + | 1172 | Protein_34 | IS3 family transposase | - |
| C9E45_RS28020 () | 36287..36802 | + | 516 | WP_000839950.1 | enterohemolysin-activating lysine-acyltransferase EhxC | - |
| C9E45_RS28025 () | 36804..39800 | + | 2997 | WP_000217739.1 | enterohemolysin EhxA | - |
| C9E45_RS28030 () | 39850..41970 | + | 2121 | WP_000987091.1 | enterohemolysin T1SS ABC transporter permease/ATPase EhxB | - |
| C9E45_RS28035 () | 41974..43413 | + | 1440 | WP_001213545.1 | enterohemolysin T1SS ABC transporter subunit EhxD | - |
| C9E45_RS28565 () | 43534..44026 | + | 493 | Protein_39 | MarR family transcriptional regulator | - |
| C9E45_RS28055 () | 44157..44387 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| C9E45_RS28060 () | 44508..45248 | + | 741 | WP_001066920.1 | tyrosine-type recombinase/integrase | - |
| C9E45_RS28065 () | 45533..46510 | - | 978 | WP_001508846.1 | RepB family plasmid replication initiator protein | - |
| C9E45_RS28075 () | 46918..47118 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| C9E45_RS28080 () | 47115..47735 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| C9E45_RS28085 () | 47732..48415 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| C9E45_RS28090 () | 48874..49092 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C9E45_RS28095 () | 49094..49399 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C9E45_RS28100 () | 49400..50206 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| C9E45_RS28115 () | 52218..52973 | + | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| C9E45_RS28120 () | 53561..54727 | + | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| C9E45_RS28125 () | 54727..55698 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C9E45_RS28135 () | 56307..57209 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| C9E45_RS28140 () | 57213..57518 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| C9E45_RS28145 () | 57595..58278 | + | 684 | WP_000085945.1 | DNA methylase | - |
| C9E45_RS28150 () | 58279..58500 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| C9E45_RS28155 () | 58394..58948 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| C9E45_RS28570 () | 58994..59770 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| C9E45_RS28170 () | 60311..60613 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| C9E45_RS28175 () | 60660..61082 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| C9E45_RS28180 () | 61079..61270 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C9E45_RS28575 () | 61240..61749 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| C9E45_RS28195 () | 62266..62496 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C9E45_RS28200 () | 62548..63909 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| C9E45_RS28205 () | 63956..64519 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| C9E45_RS28210 () | 64605..65054 | - | 450 | WP_001451816.1 | hypothetical protein | - |
| C9E45_RS28215 () | 65124..65330 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| C9E45_RS28220 () | 65356..65808 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| C9E45_RS28225 () | 65865..66098 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| C9E45_RS28230 () | 66164..68122 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| C9E45_RS28235 () | 68177..68611 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| C9E45_RS28240 () | 68608..69369 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 69338..69536 | + | 199 | NuclAT_0 | - | - |
| - () | 69338..69536 | + | 199 | NuclAT_0 | - | - |
| - () | 69338..69536 | + | 199 | NuclAT_0 | - | - |
| - () | 69338..69536 | + | 199 | NuclAT_0 | - | - |
| C9E45_RS28245 () | 69601..69759 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E45_RS28250 () | 69893..71914 | + | 2022 | Protein_74 | relaxase/mobilization nuclease domain-containing protein | - |
| C9E45_RS28255 () | 71982..72413 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| C9E45_RS28265 () | 73050..73399 | - | 350 | Protein_76 | IS3 family transposase | - |
| C9E45_RS28270 () | 73493..73756 | + | 264 | Protein_77 | IS21 family transposase | - |
| C9E45_RS28275 () | 73796..73916 | + | 121 | Protein_78 | ATP-binding protein | - |
| C9E45_RS28280 () | 73913..74065 | + | 153 | Protein_79 | IS1 family transposase | - |
| C9E45_RS28285 () | 74172..83681 | + | 9510 | WP_000581719.1 | toxin B | - |
| C9E45_RS28290 () | 83755..83979 | + | 225 | Protein_81 | IS3 family transposase | - |
| C9E45_RS28295 () | 84047..84217 | - | 171 | Protein_82 | ATP-binding protein | - |
| C9E45_RS28300 () | 84224..84475 | - | 252 | Protein_83 | transposase | - |
| C9E45_RS28305 () | 84676..85056 | + | 381 | WP_001171554.1 | IS66 family insertion sequence hypothetical protein | - |
| C9E45_RS28310 () | 85053..85400 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| C9E45_RS28315 () | 85450..86988 | + | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| C9E45_RS28320 () | 87039..88370 | + | 1332 | Protein_87 | conjugative transfer relaxase/helicase TraI | - |
| C9E45_RS28325 () | 88390..89136 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| C9E45_RS28330 () | 89195..90055 | + | 861 | WP_000704522.1 | alpha/beta hydrolase | - |
| C9E45_RS28335 () | 90158..90718 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| C9E45_RS28340 () | 90851..91063 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| C9E45_RS28345 () | 91308..91769 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| C9E45_RS28350 () | 91815..92024 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| C9E45_RS28355 () | 92062..92400 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| C9E45_RS28360 () | 92640..92894 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|