MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94491 bp
Accession: NZ_CP028670 Location: 1..94491 Organism: Escherichia coli strain 117 Replicon: plasmid pTA117
Accession: NZ_CP028670 Location: 1..94491 Organism: Escherichia coli strain 117 Replicon: plasmid pTA117
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E46_RS27835 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| C9E46_RS27850 () | 1781..2065 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C9E46_RS27855 () | 2065..2340 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E46_RS27860 () | 2435..2641 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| C9E46_RS27865 () | 2741..2956 | - | 216 | Protein_5 | transposase | - |
| C9E46_RS27870 () | 3000..3566 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| C9E46_RS27875 () | 3566..3982 | - | 417 | Protein_7 | IS91 family transposase | - |
| C9E46_RS27880 () | 3982..4167 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| C9E46_RS27885 () | 4344..6554 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| C9E46_RS27890 () | 6598..6987 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C9E46_RS27895 () | 7044..8032 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| C9E46_RS27905 () | 8213..12115 | + | 3903 | WP_001034097.1 | Serine protease EspP | VF |
| C9E46_RS27910 () | 12371..12852 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| C9E46_RS27920 () | 14293..15114 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C9E46_RS27925 () | 15114..16220 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C9E46_RS27930 () | 16310..18031 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C9E46_RS27935 () | 18105..19103 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C9E46_RS27940 () | 19156..19344 | + | 189 | Protein_18 | hypothetical protein | - |
| C9E46_RS27945 () | 19448..19534 | - | 87 | Protein_19 | IS3 family transposase ISEhe3 | Transposase |
| C9E46_RS27955 () | 19985..22681 | + | 2697 | WP_072141201.1 | Metalloprotease StcE | VF |
| C9E46_RS27960 () | 22768..23643 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| C9E46_RS27965 () | 23644..25611 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| C9E46_RS27970 () | 25611..27116 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| C9E46_RS27975 () | 27118..28341 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| C9E46_RS27980 () | 28372..28806 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| C9E46_RS27985 () | 28803..29357 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| C9E46_RS27990 () | 29372..29719 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| C9E46_RS27995 () | 29716..30315 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| C9E46_RS28000 () | 30312..31289 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| C9E46_RS28005 () | 31328..32500 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| C9E46_RS28010 () | 32487..32999 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| C9E46_RS28015 () | 33057..33890 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| C9E46_RS28020 () | 33982..34383 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| C9E46_RS28025 () | 34562..35733 | + | 1172 | Protein_34 | IS3 family transposase ISLad1 | Transposase |
| C9E46_RS28035 () | 36274..36789 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C9E46_RS28040 () | 36791..39787 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| C9E46_RS28045 () | 39837..41957 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C9E46_RS28050 () | 41961..43400 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| C9E46_RS28590 () | 43521..44013 | + | 493 | Protein_39 | Transcriptional repressor MprA | VF |
| C9E46_RS28070 () | 44144..44374 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| C9E46_RS28075 () | 44495..45235 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| C9E46_RS28080 () | 45520..46497 | - | 978 | WP_001508846.1 | RepB family plasmid replication initiator protein | - |
| C9E46_RS28090 () | 46905..47105 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| C9E46_RS28095 () | 47102..47722 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| C9E46_RS28100 () | 47719..48402 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| C9E46_RS28105 () | 48861..49079 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C9E46_RS28110 () | 49081..49386 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C9E46_RS28115 () | 49387..50193 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| C9E46_RS28130 () | 52205..52693 | + | 489 | Protein_50 | RepB family plasmid replication initiator protein | - |
| C9E46_RS28135 () | 52746..53959 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| C9E46_RS28140 () | 54004..54273 | + | 270 | WP_001241949.1 | RepB family plasmid replication initiator protein | - |
| C9E46_RS28145 () | 54861..56027 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| C9E46_RS28150 () | 56027..56998 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C9E46_RS28160 () | 57607..58509 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| C9E46_RS28165 () | 58513..58818 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| C9E46_RS28170 () | 58895..59578 | + | 684 | WP_000085945.1 | DNA methylase | - |
| C9E46_RS28175 () | 59579..59800 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| C9E46_RS28180 () | 59694..60248 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| C9E46_RS28595 () | 60294..61070 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| C9E46_RS28195 () | 61611..61913 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| C9E46_RS28200 () | 61960..62382 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| C9E46_RS28205 () | 62379..62570 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C9E46_RS28600 () | 62540..63049 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| C9E46_RS28220 () | 63566..63796 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C9E46_RS28225 () | 63848..65209 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| C9E46_RS28230 () | 65256..65819 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| C9E46_RS28235 () | 65905..66354 | - | 450 | WP_001451816.1 | hypothetical protein | - |
| C9E46_RS28240 () | 66424..66630 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| C9E46_RS28245 () | 66656..67108 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| C9E46_RS28250 () | 67165..67398 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| C9E46_RS28255 () | 67464..69422 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| C9E46_RS28260 () | 69477..69911 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| C9E46_RS28265 () | 69908..70669 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 70638..70836 | + | 199 | NuclAT_0 | - | - |
| - () | 70638..70836 | + | 199 | NuclAT_0 | - | - |
| - () | 70638..70836 | + | 199 | NuclAT_0 | - | - |
| - () | 70638..70836 | + | 199 | NuclAT_0 | - | - |
| C9E46_RS28270 () | 70901..71059 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E46_RS28275 () | 71193..73214 | + | 2022 | Protein_76 | hypothetical protein | Relaxase |
| C9E46_RS28280 () | 73282..73713 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| C9E46_RS28290 () | 74357..74706 | - | 350 | Protein_78 | IS3 family transposase IS3H | Transposase |
| C9E46_RS28295 () | 74800..75063 | + | 264 | Protein_79 | IS21 family transposase ISEc62 | Transposase |
| C9E46_RS28300 () | 75103..75223 | + | 121 | Protein_80 | IS21 family transposase ISEc62 | Transposase |
| C9E46_RS28305 () | 75220..75372 | + | 153 | Protein_81 | IS1 family transposase | - |
| C9E46_RS28310 () | 75479..84988 | + | 9510 | WP_000581719.1 | Toxin B | VF |
| C9E46_RS28315 () | 85062..85286 | + | 225 | Protein_83 | IS3 family transposase IS3H | Transposase |
| C9E46_RS28320 () | 85354..85524 | - | 171 | Protein_84 | IS3 family transposase IS1203 | Transposase |
| C9E46_RS28325 () | 85531..85782 | - | 252 | Protein_85 | IS3 family transposase IS1203 | Transposase |
| C9E46_RS28330 () | 85983..86363 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| C9E46_RS28335 () | 86360..86707 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C9E46_RS28340 () | 86757..88295 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| C9E46_RS28345 () | 88346..89677 | + | 1332 | Protein_89 | Multifunctional conjugation protein TraI | Relaxase |
| C9E46_RS28350 () | 89697..90443 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| C9E46_RS28355 () | 90502..91362 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| C9E46_RS28360 () | 91465..92025 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| C9E46_RS28365 () | 92158..92370 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| C9E46_RS28370 () | 92615..93076 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| C9E46_RS28375 () | 93122..93331 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| C9E46_RS28380 () | 93369..93707 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| C9E46_RS28385 () | 93947..94201 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|