MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 94057 bp
Accession: NZ_CP028651 Location: 1..94057 Organism: Escherichia coli strain 124 Replicon: plasmid pTA124
Accession: NZ_CP028651 Location: 1..94057 Organism: Escherichia coli strain 124 Replicon: plasmid pTA124
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E53_RS27705 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| C9E53_RS27720 () | 1782..2066 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C9E53_RS27725 () | 2066..2341 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E53_RS27730 () | 2436..2642 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| C9E53_RS27735 () | 2742..2957 | - | 216 | Protein_5 | transposase | - |
| C9E53_RS27740 () | 3001..3567 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| C9E53_RS27745 () | 3567..3983 | - | 417 | Protein_7 | IS91 family transposase | - |
| C9E53_RS27750 () | 3983..4168 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| C9E53_RS27755 () | 4345..6555 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| C9E53_RS27760 () | 6599..6988 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C9E53_RS27765 () | 7045..8033 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| C9E53_RS27775 () | 8214..12116 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| C9E53_RS27780 () | 12372..12853 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| C9E53_RS27790 () | 14295..15116 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C9E53_RS27795 () | 15116..16222 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C9E53_RS27800 () | 16312..18033 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C9E53_RS27805 () | 18107..19105 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C9E53_RS27810 () | 19158..19346 | + | 189 | Protein_18 | hypothetical protein | - |
| C9E53_RS27815 () | 19450..19536 | - | 87 | Protein_19 | IS3 family transposase ISEhe3 | Transposase |
| C9E53_RS27825 () | 20000..22696 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| C9E53_RS27830 () | 22783..23658 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| C9E53_RS27835 () | 23659..25626 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| C9E53_RS27840 () | 25626..27131 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| C9E53_RS27845 () | 27133..28356 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| C9E53_RS27850 () | 28387..28821 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| C9E53_RS27855 () | 28818..29372 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| C9E53_RS27860 () | 29387..29734 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| C9E53_RS27865 () | 29731..30330 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| C9E53_RS27870 () | 30327..31304 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| C9E53_RS27875 () | 31343..32515 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| C9E53_RS27880 () | 32502..33014 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| C9E53_RS27885 () | 33072..33905 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| C9E53_RS27890 () | 33997..34398 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| C9E53_RS27895 () | 34577..35748 | + | 1172 | Protein_34 | IS3 family transposase ISLad1 | Transposase |
| C9E53_RS27905 () | 36289..36804 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C9E53_RS27910 () | 36806..39802 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| C9E53_RS27915 () | 39852..41972 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C9E53_RS27920 () | 41976..43415 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| C9E53_RS28460 () | 43536..44028 | + | 493 | Protein_39 | Transcriptional repressor MprA | VF |
| C9E53_RS27940 () | 44159..44389 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| C9E53_RS27945 () | 44510..45250 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| C9E53_RS27950 () | 45535..46511 | - | 977 | Protein_42 | RepB family plasmid replication initiator protein | - |
| C9E53_RS27960 () | 46919..47119 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| C9E53_RS27965 () | 47116..47736 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| C9E53_RS27970 () | 47733..48416 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| C9E53_RS27975 () | 48875..49093 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C9E53_RS27980 () | 49095..49400 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C9E53_RS27985 () | 49401..50207 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| C9E53_RS28005 () | 53418..53756 | + | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| C9E53_RS28010 () | 54344..55510 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| C9E53_RS28015 () | 55510..56481 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C9E53_RS28040 () | 57781..59505 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| C9E53_RS28045 () | 59582..60484 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| C9E53_RS28050 () | 60488..60793 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| C9E53_RS28060 () | 60870..61553 | + | 684 | WP_000085945.1 | DNA methylase | - |
| C9E53_RS28065 () | 61554..61775 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| C9E53_RS28070 () | 61669..62223 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| C9E53_RS28465 () | 62269..63045 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| C9E53_RS28085 () | 63586..63888 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| C9E53_RS28090 () | 63935..64357 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| C9E53_RS28095 () | 64354..64545 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C9E53_RS28470 () | 64515..65024 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| C9E53_RS28110 () | 65541..65771 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C9E53_RS28115 () | 65823..67184 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| C9E53_RS28120 () | 67231..67794 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| C9E53_RS28125 () | 67880..68335 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| C9E53_RS28130 () | 68405..68611 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| C9E53_RS28135 () | 68637..69089 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| C9E53_RS28140 () | 69146..69379 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| C9E53_RS28145 () | 69445..71403 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| C9E53_RS28150 () | 71458..71892 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| C9E53_RS28155 () | 71889..72650 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 72619..72817 | + | 199 | NuclAT_0 | - | - |
| - () | 72619..72817 | + | 199 | NuclAT_0 | - | - |
| - () | 72619..72817 | + | 199 | NuclAT_0 | - | - |
| - () | 72619..72817 | + | 199 | NuclAT_0 | - | - |
| C9E53_RS28160 () | 72882..73040 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E53_RS28165 () | 73174..75195 | + | 2022 | Protein_76 | hypothetical protein | Relaxase |
| C9E53_RS28170 () | 75263..75694 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| C9E53_RS28185 () | 76373..76722 | - | 350 | Protein_78 | IS3 family transposase IS3H | Transposase |
| C9E53_RS28190 () | 76816..77079 | + | 264 | Protein_79 | IS21 family transposase ISEc62 | Transposase |
| C9E53_RS28195 () | 77119..77239 | + | 121 | Protein_80 | IS21 family transposase ISEc62 | Transposase |
| C9E53_RS28200 () | 77236..77388 | + | 153 | Protein_81 | IS1 family transposase | - |
| C9E53_RS28205 () | 77495..87004 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| C9E53_RS28210 () | 87078..87302 | + | 225 | Protein_83 | IS3 family transposase IS3H | Transposase |
| C9E53_RS28215 () | 87370..87540 | - | 171 | Protein_84 | IS3 family transposase IS1203 | Transposase |
| C9E53_RS28220 () | 87547..87798 | - | 252 | Protein_85 | IS3 family transposase IS1203 | Transposase |
| C9E53_RS28225 () | 87855..89243 | + | 1389 | Protein_86 | Multifunctional conjugation protein TraI | Relaxase |
| C9E53_RS28230 () | 89263..90009 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| C9E53_RS28235 () | 90068..90928 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| C9E53_RS28240 () | 91031..91591 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| C9E53_RS28245 () | 91724..91936 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| C9E53_RS28250 () | 92181..92642 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| C9E53_RS28255 () | 92688..92897 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| C9E53_RS28260 () | 92935..93273 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| C9E53_RS28265 () | 93513..93767 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|