MGE detailed information
MGE type: Genomic_island MGE length: 19867 bp
Accession: NZ_CP028650 Location: 4771365..4791231 Organism: Escherichia coli strain 124 Replicon: chromosome
Accession: NZ_CP028650 Location: 4771365..4791231 Organism: Escherichia coli strain 124 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E53_RS24560 () | 4766559..4768709 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| C9E53_RS24565 () | 4768759..4768962 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| C9E53_RS24570 () | 4768973..4769929 | + | 957 | WP_001297640.1 | GTPase | - |
| C9E53_RS24575 () | 4769998..4771356 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| C9E53_RS24580 () | 4771365..4771649 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| C9E53_RS24585 () | 4771927..4774359 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| C9E53_RS24590 () | 4774426..4775895 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| C9E53_RS24595 () | 4775895..4777649 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4777799..4777875 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4777799..4777875 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4777799..4777875 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4777799..4777875 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4777799..4777875 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4777799..4777875 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4777799..4777875 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4777799..4777875 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| C9E53_RS24600 () | 4777870..4778211 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| C9E53_RS24605 () | 4778258..4779421 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| C9E53_RS24610 () | 4779469..4780350 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| C9E53_RS24615 () | 4780447..4780611 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| C9E53_RS24620 () | 4780788..4782200 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| C9E53_RS28450 () | 4782443..4782643 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| C9E53_RS24625 () | 4782648..4783400 | - | 753 | Protein_4692 | Recombination-promoting nuclease RpnD | VF |
| C9E53_RS24630 () | 4783867..4785099 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| C9E53_RS24635 () | 4785140..4786411 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| C9E53_RS24640 () | 4786527..4787678 | + | 1152 | WP_001302771.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| C9E53_RS24645 () | 4787688..4788455 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| C9E53_RS24650 () | 4788452..4788718 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| C9E53_RS24655 () | 4789030..4791231 | + | 2202 | WP_000535071.1 | hypothetical protein | VF |
| C9E53_RS24665 () | 4791497..4792339 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| C9E53_RS24670 () | 4792407..4793585 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.005 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.005 |