MGE detailed information
MGE type: Prophage MGE length: 87267 bp
Accession: NZ_CP028647 Location: 4309987..4397253 Organism: Escherichia coli strain 130 Replicon: chromosome
Accession: NZ_CP028647 Location: 4309987..4397253 Organism: Escherichia coli strain 130 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E54_RS22150 () | 4306279..4307235 | + | 957 | WP_000121344.1 | molybdenum cofactor insertion chaperone PaoD | - |
| C9E54_RS22155 () | 4307414..4308541 | - | 1128 | WP_000171065.1 | MFS transporter | - |
| C9E54_RS22160 () | 4308683..4309741 | - | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
| C9E54_RS22165 () | 4309987..4310889 | + | 903 | WP_010917758.1 | hypothetical protein | VF |
| C9E54_RS22175 () | 4311592..4311870 | - | 279 | WP_001301751.1 | hypothetical protein | - |
| C9E54_RS22180 () | 4312037..4312759 | - | 723 | WP_000361969.1 | hypothetical protein | VF |
| C9E54_RS22185 () | 4312858..4313757 | + | 900 | WP_000687183.1 | hypothetical protein | VF |
| C9E54_RS22190 () | 4314433..4315389 | + | 957 | WP_000205213.1 | hypothetical protein | - |
| C9E54_RS22195 () | 4315522..4317855 | - | 2334 | WP_000016225.1 | toprim domain-containing protein | - |
| C9E54_RS22200 () | 4317869..4318192 | - | 324 | WP_000562750.1 | DUF5375 family protein | - |
| C9E54_RS22205 () | 4318192..4318413 | - | 222 | WP_001071227.1 | hypothetical protein | - |
| C9E54_RS22210 () | 4318410..4318967 | - | 558 | WP_000973389.1 | host cell division inhibitor Icd-like protein | - |
| C9E54_RS22215 () | 4318964..4319224 | - | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
| C9E54_RS22220 () | 4320158..4320910 | + | 753 | WP_000154958.1 | septation initiation protein | - |
| C9E54_RS22225 () | 4320907..4321458 | + | 552 | WP_000968317.1 | Polarity suppression protein | - |
| C9E54_RS22230 () | 4321464..4321736 | + | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
| C9E54_RS22240 () | 4322146..4322712 | - | 567 | WP_000350115.1 | hypothetical protein | - |
| C9E54_RS22245 () | 4322712..4323302 | - | 591 | WP_000647284.1 | hypothetical protein | - |
| C9E54_RS22250 () | 4323333..4323965 | - | 633 | WP_000999326.1 | AAA family ATPase | - |
| C9E54_RS22255 () | 4323958..4324416 | - | 459 | WP_000251694.1 | hypothetical protein | - |
| C9E54_RS22260 () | 4324416..4325033 | - | 618 | WP_001303996.1 | hypothetical protein | - |
| C9E54_RS22265 () | 4325006..4325422 | - | 417 | WP_000082144.1 | hypothetical protein | - |
| C9E54_RS22270 () | 4325426..4326607 | - | 1182 | WP_001130487.1 | hypothetical protein ; Integrase | Integrase |
| C9E54_RS22275 () | 4327094..4327528 | + | 435 | Protein_4237 | IS3 family transposase ISEc48 | Transposase |
| C9E54_RS22280 () | 4327570..4328313 | - | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| C9E54_RS22285 () | 4329138..4329911 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| C9E54_RS22290 () | 4329972..4330526 | - | 555 | WP_000905124.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| C9E54_RS22295 () | 4330557..4330967 | + | 411 | WP_001145350.1 | hypothetical protein | - |
| C9E54_RS22300 () | 4330988..4331431 | + | 444 | WP_001008234.1 | tail fiber assembly protein | - |
| C9E54_RS22305 () | 4331403..4332005 | - | 603 | WP_000368084.1 | tail fiber assembly protein | - |
| C9E54_RS22310 () | 4332005..4332775 | - | 771 | WP_000554706.1 | phage tail protein | - |
| C9E54_RS22315 () | 4332779..4333363 | - | 585 | WP_000383550.1 | YmfQ family protein | - |
| C9E54_RS22320 () | 4333354..4334412 | - | 1059 | WP_000785302.1 | baseplate J/gp47 family protein | - |
| C9E54_RS22325 () | 4334399..4334824 | - | 426 | WP_000424732.1 | phage GP46 family protein | - |
| C9E54_RS22330 () | 4334824..4335372 | - | 549 | WP_001259066.1 | phage baseplate assembly protein V | - |
| C9E54_RS22335 () | 4335372..4336451 | - | 1080 | WP_000999513.1 | baseplate protein | - |
| C9E54_RS22340 () | 4336448..4337776 | - | 1329 | WP_000219910.1 | DNA circularization N-terminal domain-containing protein | - |
| C9E54_RS22345 () | 4337837..4339672 | - | 1836 | WP_000807197.1 | phage tail tape measure protein | - |
| C9E54_RS22355 () | 4339814..4340083 | - | 270 | WP_000661054.1 | phage tail assembly protein | - |
| C9E54_RS22360 () | 4340083..4340439 | - | 357 | WP_000090993.1 | phage tail tube protein | - |
| C9E54_RS22365 () | 4340439..4341935 | - | 1497 | WP_000155728.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| C9E54_RS22370 () | 4341919..4342089 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| C9E54_RS22375 () | 4342098..4342658 | - | 561 | WP_000779288.1 | hypothetical protein | - |
| C9E54_RS22380 () | 4342655..4343161 | - | 507 | WP_000224836.1 | hypothetical protein | - |
| C9E54_RS22385 () | 4343136..4343546 | - | 411 | WP_000702395.1 | phage head closure protein | - |
| C9E54_RS22390 () | 4343543..4343866 | - | 324 | WP_000924828.1 | head-tail connector protein | - |
| C9E54_RS22395 () | 4343945..4345174 | - | 1230 | WP_000766100.1 | phage major capsid protein | - |
| C9E54_RS22400 () | 4345185..4345787 | - | 603 | WP_000999805.1 | HK97 family phage prohead protease | - |
| C9E54_RS22405 () | 4345780..4347006 | - | 1227 | WP_000923141.1 | phage portal protein | - |
| C9E54_RS28545 () | 4346996..4347157 | - | 162 | WP_000838374.1 | hypothetical protein | - |
| C9E54_RS22410 () | 4347154..4348650 | - | 1497 | WP_128484532.1 | terminase large subunit | - |
| C9E54_RS22415 () | 4348884..4349378 | - | 495 | WP_000929175.1 | phage terminase small subunit P27 family | - |
| C9E54_RS22420 () | 4349504..4349854 | - | 351 | WP_001135207.1 | HNH endonuclease | - |
| C9E54_RS22430 () | 4350380..4350673 | + | 294 | WP_000738423.1 | increased serum survival lipoprotein Iss | - |
| C9E54_RS22435 () | 4350764..4350946 | - | 183 | WP_001228695.1 | prophage lysis lipoprotein RzoD | - |
| C9E54_RS22440 () | 4351163..4351639 | - | 477 | WP_001197766.1 | glycoside hydrolase family protein | - |
| C9E54_RS22445 () | 4351643..4351978 | - | 336 | WP_001120501.1 | phage holin, lambda family | - |
| C9E54_RS22450 () | 4352115..4352408 | - | 294 | WP_001449601.1 | site-specific DNA-methyltransferase | - |
| C9E54_RS22455 () | 4352687..4352920 | - | 234 | WP_001310393.1 | hypothetical protein | - |
| C9E54_RS22460 () | 4353064..4353603 | - | 540 | WP_000484663.1 | hypothetical protein | - |
| C9E54_RS22465 () | 4353818..4354570 | - | 753 | WP_001008431.1 | antitermination protein | - |
| C9E54_RS22470 () | 4354584..4355573 | - | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| C9E54_RS22475 () | 4355581..4356390 | - | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| C9E54_RS22480 () | 4356410..4356799 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E54_RS22485 () | 4356796..4357122 | - | 327 | WP_000210141.1 | LexA family transcriptional regulator | - |
| C9E54_RS22490 () | 4357119..4357772 | - | 654 | WP_001303054.1 | phage N-6-adenine-methyltransferase | - |
| C9E54_RS22495 () | 4357772..4358266 | - | 495 | WP_072141203.1 | PerC family transcriptional regulator | - |
| C9E54_RS22500 () | 4358263..4359204 | - | 942 | WP_000104949.1 | helix-turn-helix domain-containing protein | - |
| C9E54_RS22505 () | 4359194..4359373 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| C9E54_RS22510 () | 4359549..4360100 | - | 552 | WP_000515845.1 | protein YmfL | - |
| C9E54_RS22515 () | 4360093..4360353 | - | 261 | WP_001191674.1 | helix-turn-helix transcriptional regulator | - |
| C9E54_RS22525 () | 4360451..4361143 | + | 693 | WP_001020634.1 | helix-turn-helix transcriptional regulator | - |
| C9E54_RS22530 () | 4361421..4361717 | + | 297 | WP_000917896.1 | hypothetical protein | - |
| C9E54_RS22550 () | 4363708..4364244 | + | 537 | WP_000008235.1 | 5'-deoxynucleotidase | - |
| C9E54_RS22555 () | 4364235..4364597 | + | 363 | WP_001242749.1 | phage protein | - |
| C9E54_RS22560 () | 4364597..4364902 | + | 306 | WP_000206732.1 | hypothetical protein | - |
| C9E54_RS22570 () | 4365129..4366292 | + | 1164 | WP_000051887.1 | hypothetical protein ; Integrase | Integrase |
| C9E54_RS22580 () | 4366497..4367750 | - | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
| C9E54_RS22585 () | 4367762..4368865 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| C9E54_RS22590 () | 4369153..4370208 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| C9E54_RS22595 () | 4370247..4370648 | - | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| C9E54_RS22600 () | 4370706..4371950 | - | 1245 | WP_000189536.1 | esterase FrsA | - |
| - () | 4371366..4371446 | - | 81 | NuclAT_11 | - | - |
| - () | 4371366..4371446 | - | 81 | NuclAT_11 | - | - |
| - () | 4371366..4371446 | - | 81 | NuclAT_11 | - | - |
| - () | 4371366..4371446 | - | 81 | NuclAT_11 | - | - |
| C9E54_RS22605 () | 4372042..4372500 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| C9E54_RS22610 () | 4372761..4374218 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| C9E54_RS22615 () | 4374275..4374796 | - | 522 | Protein_4299 | peptide chain release factor H | - |
| C9E54_RS22620 () | 4374795..4374998 | - | 204 | Protein_4300 | RNA ligase RtcB family protein | - |
| C9E54_RS22625 () | 4375317..4375769 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| C9E54_RS22630 () | 4375779..4376177 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| C9E54_RS22635 () | 4376180..4376473 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| C9E54_RS22640 () | 4376525..4377580 | - | 1056 | WP_001226186.1 | DNA polymerase IV | - |
| C9E54_RS22645 () | 4377651..4378436 | - | 786 | WP_000207556.1 | hypothetical protein | VF |
| C9E54_RS22650 () | 4378408..4380120 | + | 1713 | Protein_4306 | hypothetical protein | VF |
| C9E54_RS22655 () | 4380265..4380762 | - | 498 | Protein_4307 | REP-associated tyrosine transposase RayT | - |
| C9E54_RS22660 () | 4380938..4381711 | - | 774 | WP_000543891.1 | hypothetical protein | VF |
| C9E54_RS22665 () | 4381897..4382157 | + | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| C9E54_RS22670 () | 4382176..4382436 | + | 261 | WP_001303998.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| C9E54_RS22675 () | 4382592..4383332 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| C9E54_RS22680 () | 4383303..4384070 | - | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
| C9E54_RS22685 () | 4384175..4384753 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| C9E54_RS22690 () | 4384993..4387437 | + | 2445 | WP_000973071.1 | hypothetical protein | VF |
| C9E54_RS22695 () | 4387480..4387926 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| C9E54_RS22700 () | 4388107..4388877 | + | 771 | WP_001118031.1 | 2-oxoglutaramate amidase | - |
| C9E54_RS22705 () | 4388995..4390167 | - | 1173 | WP_000027427.1 | ISAs1 family transposase ISEc26 | Transposase |
| C9E54_RS22710 () | 4390248..4390433 | + | 186 | WP_120795385.1 | protein YncO | - |
| C9E54_RS22715 () | 4390348..4390611 | - | 264 | WP_000247943.1 | hypothetical protein | - |
| C9E54_RS22720 () | 4390813..4395036 | - | 4224 | WP_000509142.1 | hypothetical protein | VF |
| C9E54_RS22725 () | 4395112..4397253 | - | 2142 | WP_000103335.1 | hypothetical protein | VF |
| C9E54_RS22730 () | 4397463..4397981 | - | 519 | WP_001142958.1 | Hcp family type VI secretion system effector | - |
| C9E54_RS22735 () | 4398679..4399179 | + | 501 | WP_000037399.1 | type VI secretion system contractile sheath small subunit | - |
| C9E54_RS22740 () | 4399214..4399438 | + | 225 | WP_000123970.1 | hypothetical protein | - |
| C9E54_RS22745 () | 4399489..4400880 | + | 1392 | WP_000056994.1 | type VI secretion system contractile sheath large subunit | - |
| C9E54_RS22750 () | 4400971..4401384 | + | 414 | WP_000599596.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|