MGE detailed information
MGE type: Prophage MGE length: 115907 bp
Accession: NZ_CP028644 Location: 2513716..2629622 Organism: Escherichia coli strain 131 Replicon: chromosome
Accession: NZ_CP028644 Location: 2513716..2629622 Organism: Escherichia coli strain 131 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E55_RS12830 () | 2511091..2513517 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E55_RS12835 () | 2513716..2514021 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| C9E55_RS12840 () | 2514129..2514839 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| C9E55_RS12845 () | 2514842..2515402 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C9E55_RS12850 () | 2515437..2515778 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| C9E55_RS12855 () | 2515913..2516239 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| C9E55_RS12865 () | 2517009..2517193 | - | 185 | Protein_2459 | DUF3596 domain-containing protein | - |
| C9E55_RS12870 () | 2517228..2517479 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C9E55_RS12875 () | 2517552..2520023 | - | 2472 | WP_000048458.1 | exonuclease | - |
| C9E55_RS12880 () | 2520116..2520307 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C9E55_RS12885 () | 2520304..2520492 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C9E55_RS12895 () | 2521061..2521279 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| C9E55_RS12900 () | 2521351..2521650 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| C9E55_RS12905 () | 2522003..2522281 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E55_RS12910 () | 2522283..2522474 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C9E55_RS12915 () | 2522495..2522866 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| C9E55_RS12920 () | 2522964..2523266 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| C9E55_RS12925 () | 2523263..2523688 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C9E55_RS12930 () | 2523711..2524673 | + | 963 | WP_000095670.1 | helix-turn-helix domain-containing protein | - |
| C9E55_RS12935 () | 2524680..2525420 | + | 741 | WP_000788936.1 | ATP-binding protein | - |
| C9E55_RS12940 () | 2525446..2526215 | + | 770 | Protein_2473 | DUF1627 domain-containing protein | - |
| C9E55_RS12945 () | 2526231..2526626 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| C9E55_RS12950 () | 2526683..2527267 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| C9E55_RS12955 () | 2527383..2527487 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| C9E55_RS12960 () | 2527733..2527888 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| C9E55_RS12965 () | 2528056..2528334 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| C9E55_RS12970 () | 2528336..2529385 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| C9E55_RS12975 () | 2529398..2529757 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E55_RS12980 () | 2529754..2530443 | + | 690 | WP_001059381.1 | antiterminator | - |
| C9E55_RS13005 () | 2531080..2531508 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| C9E55_RS13010 () | 2531505..2531760 | + | 256 | Protein_2483 | DUF3927 family protein | - |
| C9E55_RS13015 () | 2531987..2533837 | + | 1851 | WP_024748470.1 | SASA family carbohydrate esterase | - |
| C9E55_RS13020 () | 2534277..2534492 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E55_RS13025 () | 2534497..2534841 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E55_RS13030 () | 2534892..2535425 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E55_RS13035 () | 2535695..2536264 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E55_RS13040 () | 2536264..2536410 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C9E55_RS13050 () | 2536638..2536823 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C9E55_RS13055 () | 2537248..2537475 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C9E55_RS13060 () | 2537517..2537882 | + | 366 | WP_015994246.1 | HNH endonuclease | - |
| C9E55_RS13070 () | 2538172..2538735 | + | 564 | WP_001303051.1 | terminase small subunit | - |
| C9E55_RS13075 () | 2538732..2540393 | + | 1662 | WP_024748457.1 | terminase large subunit | - |
| C9E55_RS13080 () | 2540457..2542394 | + | 1938 | WP_000172999.1 | phage major capsid protein | - |
| C9E55_RS13085 () | 2542439..2542660 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| C9E55_RS13090 () | 2542606..2545107 | + | 2502 | WP_000267292.1 | phage portal protein | - |
| C9E55_RS13095 () | 2545187..2545513 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| C9E55_RS13100 () | 2545523..2545873 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| C9E55_RS13105 () | 2545870..2546316 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| C9E55_RS13110 () | 2546384..2546656 | + | 273 | WP_071587642.1 | DUF3168 domain-containing protein | - |
| C9E55_RS13115 () | 2546715..2547431 | + | 717 | WP_001275508.1 | tail protein | - |
| C9E55_RS13120 () | 2547437..2547811 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| C9E55_RS13125 () | 2547907..2548116 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C9E55_RS13130 () | 2548169..2551411 | + | 3243 | WP_064261924.1 | phage tail tape measure protein | - |
| C9E55_RS13135 () | 2551404..2551745 | + | 342 | WP_000807954.1 | phage tail protein | - |
| C9E55_RS13140 () | 2551745..2552443 | + | 699 | WP_001303038.1 | phage minor tail protein L | - |
| C9E55_RS13145 () | 2552454..2553197 | + | 744 | WP_046671488.1 | C40 family peptidase | - |
| C9E55_RS13150 () | 2553143..2553775 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| C9E55_RS13155 () | 2554118..2555293 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| C9E55_RS13160 () | 2555245..2557590 | + | 2346 | WP_129137390.1 | host specificity protein J | - |
| C9E55_RS13165 () | 2557658..2558257 | + | 600 | WP_001228304.1 | hypothetical protein | VF |
| C9E55_RS13170 () | 2558409..2559722 | + | 1314 | WP_024748516.1 | ISNCY family transposase KIS | Transposase |
| C9E55_RS13175 () | 2559724..2559993 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E55_RS13180 () | 2560106..2560680 | + | 575 | Protein_2515 | hypothetical protein | VF |
| C9E55_RS13185 () | 2561020..2562345 | - | 1326 | WP_001025672.1 | hypothetical protein | VF |
| C9E55_RS13195 () | 2563006..2563920 | - | 915 | Protein_2517 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C9E55_RS13200 () | 2563934..2564044 | + | 111 | Protein_2518 | type III effector | - |
| C9E55_RS13205 () | 2564091..2564725 | - | 635 | Protein_2519 | IS256 family transposase ISEic2 | Transposase |
| C9E55_RS13210 () | 2565010..2566548 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| C9E55_RS13215 () | 2566598..2566945 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C9E55_RS13220 () | 2566942..2567322 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| C9E55_RS13225 () | 2567662..2567940 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| C9E55_RS13230 () | 2568368..2568514 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| C9E55_RS13235 () | 2568651..2569298 | - | 648 | WP_001303944.1 | hypothetical protein | VF |
| C9E55_RS13240 () | 2569482..2570072 | + | 591 | WP_001144877.1 | hypothetical protein | VF |
| C9E55_RS13245 () | 2570291..2571347 | - | 1057 | Protein_2527 | IS630 family transposase | - |
| C9E55_RS13250 () | 2571579..2572229 | + | 651 | WP_001345079.1 | hypothetical protein | VF |
| C9E55_RS13255 () | 2572388..2572623 | + | 236 | Protein_2529 | IS3 family transposase | - |
| C9E55_RS13265 () | 2573358..2573483 | + | 126 | Protein_2530 | outer membrane protein OmpW | - |
| C9E55_RS13270 () | 2573529..2574659 | - | 1131 | WP_001500821.1 | hypothetical protein ; Integrase | Integrase |
| C9E55_RS13275 () | 2574637..2574885 | - | 249 | WP_000113189.1 | excisionase | - |
| C9E55_RS13280 () | 2574950..2577394 | - | 2445 | WP_000102181.1 | exonuclease | - |
| C9E55_RS13285 () | 2577487..2577675 | - | 189 | WP_000092782.1 | DUF1482 family protein | - |
| C9E55_RS13290 () | 2577672..2577860 | - | 189 | WP_000450222.1 | cell division inhibitor | - |
| C9E55_RS13300 () | 2578425..2578634 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| C9E55_RS13305 () | 2578635..2579273 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| C9E55_RS13310 () | 2579285..2579437 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| C9E55_RS13315 () | 2579730..2580068 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| C9E55_RS13320 () | 2580460..2580702 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| C9E55_RS13325 () | 2580686..2581111 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| C9E55_RS13330 () | 2581180..2582223 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| C9E55_RS13335 () | 2582216..2582677 | + | 462 | WP_000139447.1 | replication protein | - |
| C9E55_RS13340 () | 2582711..2583427 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| C9E55_RS13345 () | 2583460..2583741 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| C9E55_RS13350 () | 2583738..2583965 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| C9E55_RS13355 () | 2583958..2584269 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| C9E55_RS13360 () | 2584397..2584615 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C9E55_RS13365 () | 2584617..2585174 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| - () | 2585395..2585453 | - | 59 | - | - | Antitoxin Detail |
| C9E55_RS13370 () | 2585465..2585620 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C9E55_RS13375 () | 2585740..2586084 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C9E55_RS13380 () | 2586206..2586478 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| C9E55_RS13385 () | 2586480..2587529 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C9E55_RS13390 () | 2587542..2587847 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E55_RS13395 () | 2587910..2588464 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| C9E55_RS13400 () | 2588689..2588886 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| C9E55_RS13405 () | 2589022..2589735 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| C9E55_RS13420 () | 2590186..2590617 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| C9E55_RS13425 () | 2590614..2590869 | + | 256 | Protein_2559 | DUF3927 family protein | - |
| C9E55_RS13430 () | 2591095..2592945 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| C9E55_RS13435 () | 2593385..2593600 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E55_RS13440 () | 2593605..2593949 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E55_RS13445 () | 2594000..2594533 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E55_RS13450 () | 2594804..2595373 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E55_RS13455 () | 2595373..2595519 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| C9E55_RS13460 () | 2595742..2595927 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C9E55_RS13465 () | 2596453..2596767 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C9E55_RS13470 () | 2596849..2597073 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C9E55_RS13480 () | 2597460..2598005 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| C9E55_RS13485 () | 2597980..2599905 | + | 1926 | WP_024748469.1 | phage terminase large subunit family protein | - |
| C9E55_RS13490 () | 2599902..2600108 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C9E55_RS13495 () | 2600105..2601706 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| C9E55_RS13500 () | 2601687..2603006 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| C9E55_RS13505 () | 2603016..2603348 | + | 333 | WP_001295978.1 | head decoration protein | - |
| C9E55_RS13510 () | 2603404..2604429 | + | 1026 | WP_024748468.1 | major capsid protein | - |
| C9E55_RS13515 () | 2604471..2604869 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| C9E55_RS13520 () | 2604881..2605234 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| C9E55_RS13525 () | 2605249..2605782 | + | 534 | WP_000975020.1 | phage tail protein | - |
| C9E55_RS13530 () | 2605779..2606174 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| C9E55_RS13535 () | 2606182..2606934 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| C9E55_RS13540 () | 2606948..2607370 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| C9E55_RS13545 () | 2607397..2607810 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C9E55_RS13550 () | 2607791..2610403 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| C9E55_RS13555 () | 2610400..2610729 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C9E55_RS13560 () | 2610729..2611427 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| C9E55_RS13565 () | 2611438..2612181 | + | 744 | WP_000194801.1 | C40 family peptidase | - |
| C9E55_RS13570 () | 2612127..2612759 | + | 633 | WP_129137391.1 | tail assembly protein | - |
| C9E55_RS13580 () | 2612996..2616474 | + | 3479 | Protein_2588 | host specificity protein J | - |
| C9E55_RS13585 () | 2616542..2617141 | + | 600 | WP_001230508.1 | hypothetical protein | VF |
| C9E55_RS13590 () | 2617206..2618519 | + | 1314 | WP_137049508.1 | ISNCY family transposase KIS | Transposase |
| C9E55_RS13595 () | 2618521..2618790 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E55_RS13600 () | 2618904..2619479 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| C9E55_RS13605 () | 2619552..2620181 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| C9E55_RS13610 () | 2620263..2620904 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| C9E55_RS13620 () | 2621066..2621308 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E55_RS13625 () | 2621440..2622723 | + | 1284 | Protein_2596 | MHS family MFS transporter YdfJ | - |
| C9E55_RS13630 () | 2622812..2624272 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| C9E55_RS13635 () | 2624308..2624511 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C9E55_RS13640 () | 2624688..2625374 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C9E55_RS13645 () | 2625463..2626209 | - | 747 | WP_000636568.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| C9E55_RS13650 () | 2626346..2628391 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| C9E55_RS13655 () | 2628436..2628954 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| C9E55_RS13660 () | 2629230..2629622 | + | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| C9E55_RS13665 () | 2629877..2630767 | + | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| C9E55_RS28670 () | 2630882..2630986 | - | 105 | WP_211180496.1 | protein MgtT | - |
| C9E55_RS13670 () | 2630986..2631081 | - | 96 | WP_000901365.1 | protein MgtS | - |
| C9E55_RS13675 () | 2631189..2632160 | - | 972 | WP_001310251.1 | transcriptional regulator FtrA | - |
| C9E55_RS13680 () | 2632255..2632650 | + | 396 | WP_001271101.1 | rhodanese | - |
| C9E55_RS13685 () | 2632691..2633878 | - | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|