MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93181 bp
Accession: NZ_CP028637 Location: 1..93181 Organism: Escherichia coli strain 134 Replicon: plasmid pTA134
Accession: NZ_CP028637 Location: 1..93181 Organism: Escherichia coli strain 134 Replicon: plasmid pTA134
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E58_RS27830 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| C9E58_RS27845 () | 1781..2065 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C9E58_RS27850 () | 2065..2340 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E58_RS27855 () | 2435..2641 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| C9E58_RS27860 () | 2741..2956 | - | 216 | Protein_5 | transposase | - |
| C9E58_RS27865 () | 3000..3566 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| C9E58_RS27870 () | 3566..3982 | - | 417 | Protein_7 | IS91 family transposase | - |
| C9E58_RS27875 () | 3982..4167 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| C9E58_RS27880 () | 4344..6554 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| C9E58_RS27885 () | 6598..6987 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C9E58_RS27890 () | 7044..8032 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| C9E58_RS27900 () | 8213..12115 | + | 3903 | WP_001034097.1 | Serine protease EspP | VF |
| C9E58_RS27905 () | 12371..12852 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| C9E58_RS27915 () | 14293..15114 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C9E58_RS27920 () | 15114..16220 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C9E58_RS27925 () | 16310..18031 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C9E58_RS27930 () | 18105..19103 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C9E58_RS27935 () | 19156..19344 | + | 189 | Protein_18 | hypothetical protein | - |
| C9E58_RS27940 () | 19448..19534 | - | 87 | Protein_19 | IS3 family transposase ISEhe3 | Transposase |
| C9E58_RS27950 () | 19995..22691 | + | 2697 | WP_072141201.1 | Metalloprotease StcE | VF |
| C9E58_RS27955 () | 22778..23653 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| C9E58_RS27960 () | 23654..25621 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| C9E58_RS27965 () | 25621..27126 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| C9E58_RS27970 () | 27128..28351 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| C9E58_RS27975 () | 28382..28816 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| C9E58_RS27980 () | 28813..29367 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| C9E58_RS27985 () | 29382..29729 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| C9E58_RS27990 () | 29726..30325 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| C9E58_RS27995 () | 30322..31299 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| C9E58_RS28000 () | 31338..32510 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| C9E58_RS28005 () | 32497..33009 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| C9E58_RS28010 () | 33067..33900 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| C9E58_RS28015 () | 33992..34393 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| C9E58_RS28020 () | 34572..35743 | + | 1172 | Protein_34 | IS3 family transposase ISLad1 | Transposase |
| C9E58_RS28030 () | 36284..36799 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C9E58_RS28035 () | 36801..39797 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| C9E58_RS28040 () | 39847..41967 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C9E58_RS28045 () | 41971..43410 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| C9E58_RS28575 () | 43531..44023 | + | 493 | Protein_39 | Transcriptional repressor MprA | VF |
| C9E58_RS28065 () | 44154..44384 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| C9E58_RS28070 () | 44505..45245 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| C9E58_RS28075 () | 45530..46507 | - | 978 | WP_001508846.1 | RepB family plasmid replication initiator protein | - |
| C9E58_RS28085 () | 46915..47115 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| C9E58_RS28090 () | 47112..47732 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| C9E58_RS28095 () | 47729..48412 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| C9E58_RS28100 () | 48871..49089 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C9E58_RS28105 () | 49091..49396 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C9E58_RS28110 () | 49397..50203 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| C9E58_RS28125 () | 52215..52970 | + | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| C9E58_RS28130 () | 53558..54724 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| C9E58_RS28135 () | 54724..55695 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C9E58_RS28145 () | 56304..57206 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| C9E58_RS28150 () | 57210..57515 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| C9E58_RS28155 () | 57592..58275 | + | 684 | WP_000085945.1 | DNA methylase | - |
| C9E58_RS28160 () | 58276..58497 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| C9E58_RS28165 () | 58391..58945 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| C9E58_RS28580 () | 58991..59767 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| C9E58_RS28180 () | 60308..60610 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| C9E58_RS28185 () | 60657..61079 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| C9E58_RS28190 () | 61076..61267 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C9E58_RS28585 () | 61237..61746 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| C9E58_RS28205 () | 62263..62493 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C9E58_RS28210 () | 62545..63906 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| C9E58_RS28215 () | 63953..64516 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| C9E58_RS28220 () | 64602..65051 | - | 450 | WP_001451816.1 | hypothetical protein | - |
| C9E58_RS28225 () | 65121..65327 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| C9E58_RS28230 () | 65353..65805 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| C9E58_RS28235 () | 65862..66095 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| C9E58_RS28240 () | 66161..68119 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| C9E58_RS28245 () | 68174..68608 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| C9E58_RS28250 () | 68605..69366 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 69335..69533 | + | 199 | NuclAT_0 | - | - |
| - () | 69335..69533 | + | 199 | NuclAT_0 | - | - |
| - () | 69335..69533 | + | 199 | NuclAT_0 | - | - |
| - () | 69335..69533 | + | 199 | NuclAT_0 | - | - |
| C9E58_RS28255 () | 69598..69756 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E58_RS28260 () | 69890..71911 | + | 2022 | Protein_74 | hypothetical protein | Relaxase |
| C9E58_RS28265 () | 71979..72410 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| C9E58_RS28275 () | 73047..73396 | - | 350 | Protein_76 | IS3 family transposase IS3H | Transposase |
| C9E58_RS28280 () | 73490..73753 | + | 264 | Protein_77 | IS21 family transposase ISEc62 | Transposase |
| C9E58_RS28285 () | 73793..73913 | + | 121 | Protein_78 | IS21 family transposase ISEc62 | Transposase |
| C9E58_RS28290 () | 73910..74062 | + | 153 | Protein_79 | IS1 family transposase | - |
| C9E58_RS28295 () | 74169..83678 | + | 9510 | WP_000581719.1 | Toxin B | VF |
| C9E58_RS28300 () | 83752..83976 | + | 225 | Protein_81 | IS3 family transposase IS3H | Transposase |
| C9E58_RS28305 () | 84044..84214 | - | 171 | Protein_82 | IS3 family transposase IS1203 | Transposase |
| C9E58_RS28310 () | 84221..84472 | - | 252 | Protein_83 | IS3 family transposase IS1203 | Transposase |
| C9E58_RS28315 () | 84673..85053 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| C9E58_RS28320 () | 85050..85397 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C9E58_RS28325 () | 85447..86985 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| C9E58_RS28330 () | 87036..88367 | + | 1332 | Protein_87 | Multifunctional conjugation protein TraI | Relaxase |
| C9E58_RS28335 () | 88387..89133 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| C9E58_RS28340 () | 89192..90052 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| C9E58_RS28345 () | 90155..90715 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| C9E58_RS28350 () | 90848..91060 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| C9E58_RS28355 () | 91305..91766 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| C9E58_RS28360 () | 91812..92021 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| C9E58_RS28365 () | 92059..92397 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| C9E58_RS28370 () | 92637..92891 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|