MGE detailed information
MGE type: Prophage MGE length: 122512 bp
Accession: NZ_CP028635 Location: 2507012..2629523 Organism: Escherichia coli strain 134 Replicon: chromosome
Accession: NZ_CP028635 Location: 2507012..2629523 Organism: Escherichia coli strain 134 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E58_RS12795 () | 2502912..2504132 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| C9E58_RS12800 () | 2504257..2504952 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| C9E58_RS12805 () | 2504905..2506197 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| C9E58_RS12810 () | 2506355..2506969 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| C9E58_RS12815 () | 2507012..2507866 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| C9E58_RS12820 () | 2507868..2508485 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| C9E58_RS12825 () | 2508496..2510919 | - | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E58_RS12830 () | 2510980..2513406 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E58_RS12835 () | 2513605..2513910 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| C9E58_RS12840 () | 2514018..2514728 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| C9E58_RS12845 () | 2514731..2515291 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C9E58_RS12850 () | 2515326..2515667 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| C9E58_RS12855 () | 2515802..2516128 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| C9E58_RS12865 () | 2516898..2517082 | - | 185 | Protein_2460 | DUF3596 domain-containing protein | - |
| C9E58_RS12870 () | 2517117..2517368 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C9E58_RS12875 () | 2517441..2519912 | - | 2472 | WP_000048458.1 | exonuclease | - |
| C9E58_RS12880 () | 2520005..2520196 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C9E58_RS12885 () | 2520193..2520381 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C9E58_RS12895 () | 2520950..2521168 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| C9E58_RS12900 () | 2521240..2521539 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| C9E58_RS12905 () | 2521892..2522170 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E58_RS12910 () | 2522172..2522363 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C9E58_RS12915 () | 2522384..2522755 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| C9E58_RS12920 () | 2522853..2523155 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| C9E58_RS12925 () | 2523152..2523577 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C9E58_RS12930 () | 2523600..2524562 | + | 963 | WP_000095670.1 | helix-turn-helix domain-containing protein | - |
| C9E58_RS12935 () | 2524569..2525309 | + | 741 | WP_000788936.1 | ATP-binding protein | - |
| C9E58_RS12940 () | 2525335..2526104 | + | 770 | Protein_2474 | DUF1627 domain-containing protein | - |
| C9E58_RS12945 () | 2526120..2526515 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| C9E58_RS12950 () | 2526572..2527156 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| C9E58_RS12955 () | 2527272..2527376 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| C9E58_RS12960 () | 2527622..2527777 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| C9E58_RS12965 () | 2527945..2528223 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| C9E58_RS12970 () | 2528225..2529274 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| C9E58_RS12975 () | 2529287..2529646 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E58_RS12980 () | 2529643..2530332 | + | 690 | WP_001059381.1 | antiterminator | - |
| C9E58_RS13005 () | 2530969..2531397 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| C9E58_RS13010 () | 2531394..2531649 | + | 256 | Protein_2484 | DUF3927 family protein | - |
| C9E58_RS13015 () | 2531876..2533726 | + | 1851 | WP_024748470.1 | SASA family carbohydrate esterase | - |
| C9E58_RS13020 () | 2534166..2534381 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E58_RS13025 () | 2534386..2534730 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E58_RS13030 () | 2534781..2535314 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E58_RS13035 () | 2535584..2536153 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E58_RS13040 () | 2536153..2536299 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C9E58_RS13050 () | 2536527..2536712 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C9E58_RS13055 () | 2537137..2537364 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C9E58_RS13060 () | 2537406..2537771 | + | 366 | WP_015994246.1 | HNH endonuclease | - |
| C9E58_RS13070 () | 2538061..2538624 | + | 564 | WP_001303051.1 | terminase small subunit | - |
| C9E58_RS13075 () | 2538621..2540282 | + | 1662 | WP_024748457.1 | terminase large subunit | - |
| C9E58_RS13080 () | 2540346..2542283 | + | 1938 | WP_000172999.1 | phage major capsid protein | - |
| C9E58_RS13085 () | 2542328..2542549 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| C9E58_RS13090 () | 2542495..2545079 | + | 2585 | Protein_2498 | phage portal protein | - |
| C9E58_RS13095 () | 2545076..2545402 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| C9E58_RS13100 () | 2545412..2545762 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| C9E58_RS13105 () | 2545759..2546205 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| C9E58_RS13110 () | 2546202..2546546 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C9E58_RS13115 () | 2546605..2547321 | + | 717 | WP_001275508.1 | tail protein | - |
| C9E58_RS13120 () | 2547327..2547701 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| C9E58_RS13125 () | 2547797..2548006 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C9E58_RS13130 () | 2548059..2551301 | + | 3243 | WP_064261924.1 | phage tail tape measure protein | - |
| C9E58_RS13135 () | 2551294..2551635 | + | 342 | WP_000807954.1 | phage tail protein | - |
| C9E58_RS13140 () | 2551635..2552333 | + | 699 | WP_001303038.1 | phage minor tail protein L | - |
| C9E58_RS13145 () | 2552344..2553087 | + | 744 | WP_046671488.1 | C40 family peptidase | - |
| C9E58_RS13150 () | 2553033..2553665 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| C9E58_RS13155 () | 2554008..2555183 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| C9E58_RS13160 () | 2555135..2557480 | + | 2346 | WP_129137390.1 | host specificity protein J | - |
| C9E58_RS13165 () | 2557548..2558147 | + | 600 | WP_001228304.1 | Outer membrane protein X | VF |
| C9E58_RS13170 () | 2558299..2559612 | + | 1314 | WP_024748516.1 | ISNCY family transposase KIS | Transposase |
| C9E58_RS13175 () | 2559614..2559883 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E58_RS13180 () | 2559996..2560570 | + | 575 | Protein_2516 | hypothetical protein | VF |
| C9E58_RS13185 () | 2560910..2562235 | - | 1326 | WP_001025672.1 | hypothetical protein | VF |
| C9E58_RS13195 () | 2562896..2563810 | - | 915 | Protein_2518 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C9E58_RS13200 () | 2563824..2563934 | + | 111 | Protein_2519 | type III effector | - |
| C9E58_RS13205 () | 2563981..2564615 | - | 635 | Protein_2520 | IS256 family transposase ISEic2 | Transposase |
| C9E58_RS13210 () | 2564900..2566438 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| C9E58_RS13215 () | 2566488..2566835 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C9E58_RS13220 () | 2566832..2567212 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| C9E58_RS13225 () | 2567552..2567830 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| C9E58_RS13230 () | 2568258..2568404 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| C9E58_RS13235 () | 2568541..2569188 | - | 648 | WP_001303944.1 | hypothetical protein | VF |
| C9E58_RS13240 () | 2569372..2569962 | + | 591 | WP_001144877.1 | hypothetical protein | VF |
| C9E58_RS13245 () | 2570181..2571237 | - | 1057 | Protein_2528 | IS630 family transposase | - |
| C9E58_RS13250 () | 2571469..2572119 | + | 651 | WP_001345079.1 | hypothetical protein | VF |
| C9E58_RS13255 () | 2572278..2572513 | + | 236 | Protein_2530 | IS3 family transposase | - |
| C9E58_RS13265 () | 2573248..2573373 | + | 126 | Protein_2531 | outer membrane protein OmpW | - |
| C9E58_RS13270 () | 2573419..2574549 | - | 1131 | WP_001500821.1 | hypothetical protein ; Integrase | Integrase |
| C9E58_RS13275 () | 2574527..2574775 | - | 249 | WP_000113189.1 | excisionase | - |
| C9E58_RS13280 () | 2574840..2577284 | - | 2445 | WP_000102181.1 | exonuclease | - |
| C9E58_RS13285 () | 2577377..2577565 | - | 189 | WP_000092782.1 | DUF1482 family protein | - |
| C9E58_RS13290 () | 2577562..2577750 | - | 189 | WP_000450222.1 | cell division inhibitor | - |
| C9E58_RS13300 () | 2578315..2578524 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| C9E58_RS13305 () | 2578525..2579163 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| C9E58_RS13310 () | 2579175..2579327 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| C9E58_RS13315 () | 2579620..2579958 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| C9E58_RS13320 () | 2580350..2580592 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| C9E58_RS13325 () | 2580576..2581001 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| C9E58_RS13330 () | 2581070..2582113 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| C9E58_RS13335 () | 2582106..2582567 | + | 462 | WP_000139447.1 | replication protein | - |
| C9E58_RS13340 () | 2582601..2583317 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| C9E58_RS13345 () | 2583350..2583631 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| C9E58_RS13350 () | 2583628..2583855 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| C9E58_RS13355 () | 2583848..2584159 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| C9E58_RS13360 () | 2584287..2584505 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C9E58_RS13365 () | 2584507..2585064 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| - () | 2585285..2585343 | - | 59 | - | - | Antitoxin Detail |
| C9E58_RS13370 () | 2585355..2585510 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C9E58_RS13375 () | 2585630..2585974 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C9E58_RS13380 () | 2586096..2586368 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| C9E58_RS13385 () | 2586370..2587419 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C9E58_RS13390 () | 2587432..2587737 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E58_RS13395 () | 2587800..2588354 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| C9E58_RS13400 () | 2588579..2588776 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| C9E58_RS13405 () | 2588912..2589625 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| C9E58_RS13420 () | 2590076..2590507 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| C9E58_RS13425 () | 2590504..2590759 | + | 256 | Protein_2560 | DUF3927 family protein | - |
| C9E58_RS13430 () | 2590985..2592835 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| C9E58_RS13435 () | 2593275..2593490 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E58_RS13440 () | 2593495..2593839 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E58_RS13445 () | 2593890..2594423 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E58_RS13450 () | 2594694..2595263 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E58_RS13455 () | 2595263..2595409 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| C9E58_RS13460 () | 2595632..2595817 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C9E58_RS13465 () | 2596343..2596657 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C9E58_RS13470 () | 2596739..2596963 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C9E58_RS13480 () | 2597350..2597895 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| C9E58_RS13485 () | 2597870..2599795 | + | 1926 | WP_024748469.1 | phage terminase large subunit family protein | - |
| C9E58_RS13490 () | 2599792..2599998 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C9E58_RS13495 () | 2599995..2601596 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| C9E58_RS13500 () | 2601577..2602896 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| C9E58_RS13505 () | 2602906..2603238 | + | 333 | WP_001295978.1 | head decoration protein | - |
| C9E58_RS13510 () | 2603294..2604319 | + | 1026 | WP_024748468.1 | major capsid protein | - |
| C9E58_RS13515 () | 2604361..2604759 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| C9E58_RS13520 () | 2604771..2605124 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| C9E58_RS13525 () | 2605139..2605672 | + | 534 | WP_000975020.1 | phage tail protein | - |
| C9E58_RS13530 () | 2605669..2606064 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| C9E58_RS13535 () | 2606072..2606824 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| C9E58_RS13540 () | 2606838..2607260 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| C9E58_RS13545 () | 2607287..2607700 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C9E58_RS13550 () | 2607681..2610293 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| C9E58_RS13555 () | 2610290..2610619 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C9E58_RS13560 () | 2610619..2611317 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| C9E58_RS13565 () | 2611328..2612071 | + | 744 | WP_000194801.1 | C40 family peptidase | - |
| C9E58_RS13570 () | 2612017..2612649 | + | 633 | WP_129137391.1 | tail assembly protein | - |
| C9E58_RS13575 () | 2612896..2616375 | + | 3480 | WP_000514788.1 | host specificity protein J | - |
| C9E58_RS13580 () | 2616443..2617042 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| C9E58_RS13585 () | 2617107..2618420 | + | 1314 | WP_137049508.1 | ISNCY family transposase KIS | Transposase |
| C9E58_RS13590 () | 2618422..2618691 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E58_RS13595 () | 2618805..2619380 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| C9E58_RS13600 () | 2619453..2620082 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| C9E58_RS13605 () | 2620164..2620805 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| C9E58_RS13615 () | 2620967..2621209 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E58_RS13620 () | 2621341..2622624 | + | 1284 | Protein_2597 | MHS family MFS transporter YdfJ | - |
| C9E58_RS13625 () | 2622713..2624173 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| C9E58_RS13630 () | 2624209..2624412 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C9E58_RS13635 () | 2624589..2625275 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C9E58_RS13640 () | 2625364..2626110 | - | 747 | WP_000636568.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| C9E58_RS13645 () | 2626247..2628292 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| C9E58_RS13650 () | 2628337..2628855 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| C9E58_RS13655 () | 2629131..2629523 | + | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| C9E58_RS13660 () | 2629778..2630668 | + | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| C9E58_RS28670 () | 2630783..2630887 | - | 105 | WP_211180496.1 | protein MgtT | - |
| C9E58_RS13665 () | 2630887..2630982 | - | 96 | WP_000901365.1 | protein MgtS | - |
| C9E58_RS13670 () | 2631090..2632061 | - | 972 | WP_001310251.1 | transcriptional regulator FtrA | - |
| C9E58_RS13675 () | 2632156..2632551 | + | 396 | WP_001271101.1 | rhodanese | - |
| C9E58_RS13680 () | 2632592..2633779 | - | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|