NZ_CP0286292502026..2641761

MGE detailed information

MGE type: Prophage        MGE length: 139736 bp
Accession: NZ_CP028629        Location: 2502026..2641761         Organism: Escherichia coli strain 136       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C9E60_RS28685 () 2497909..2498010 + 102 WP_211180498.1 protein YdgV -
C9E60_RS12765 () 2498117..2498482 + 366 WP_000276149.1 multidrug/spermidine efflux SMR transporter subunit MdtJ -
C9E60_RS12770 () 2498469..2498798 + 330 WP_000046661.1 multidrug/spermidine efflux SMR transporter subunit MdtI -
C9E60_RS12775 () 2498837..2499658 - 822 WP_001260835.1 serine protease -
C9E60_RS12780 () 2499758..2499841 - 84 WP_000233090.1 hypothetical protein -
C9E60_RS12785 () 2499934..2500242 - 309 WP_001414237.1 acid resistance repetitive basic protein Asr -
C9E60_RS28690 () 2500498..2500617 + 120 WP_001299090.1 hypothetical protein -
C9E60_RS12790 () 2500666..2501919 - 1254 WP_000091829.1 MFS transporter -
C9E60_RS12795 () 2502026..2502919 + 894 WP_001019530.1 hypothetical protein VF
C9E60_RS12800 () 2503054..2504274 + 1221 WP_000225276.1 DNA-binding transcriptional repressor Mlc -
C9E60_RS12805 () 2504399..2505094 + 696 WP_000919231.1 dethiobiotin synthase -
C9E60_RS12810 () 2505047..2506339 - 1293 WP_071525082.1 voltage-gated ClC-type chloride channel ClcB -
C9E60_RS12815 () 2506497..2507111 - 615 WP_000148710.1 Tat proofreading chaperone DmsD -
C9E60_RS12820 () 2507154..2508008 - 855 WP_000526515.1 dimethyl sulfoxide reductase anchor subunit -
C9E60_RS12825 () 2508010..2508627 - 618 WP_000213028.1 dimethylsulfoxide reductase subunit B -
C9E60_RS12830 () 2508638..2511061 - 2424 WP_001414236.1 dimethyl sulfoxide reductase subunit A -
C9E60_RS12835 () 2511122..2513548 - 2427 WP_000041704.1 dimethyl sulfoxide reductase subunit A -
C9E60_RS12840 () 2513747..2514052 - 306 WP_000778147.1 DUF1161 domain-containing protein -
C9E60_RS12845 () 2514160..2514870 + 711 WP_001303515.1 YnfC family lipoprotein -
C9E60_RS12850 () 2514873..2515433 - 561 WP_001138581.1 spermidine N1-acetyltransferase -
C9E60_RS12855 () 2515468..2515809 - 342 WP_000705189.1 DUF1283 family protein -
C9E60_RS12860 () 2515944..2516270 + 327 WP_001302046.1 YnfA family protein -
C9E60_RS12870 () 2517040..2517224 - 185 Protein_2460 DUF3596 domain-containing protein -
C9E60_RS12875 () 2517259..2517510 - 252 WP_000005552.1 excisionase family protein -
C9E60_RS12880 () 2517583..2520054 - 2472 WP_000048458.1 exonuclease -
C9E60_RS12885 () 2520147..2520338 - 192 WP_001090200.1 DUF1482 family protein -
C9E60_RS12890 () 2520335..2520523 - 189 WP_000449192.1 cell division inhibition protein DicB -
C9E60_RS12900 () 2521092..2521310 - 219 WP_001171930.1 hypothetical protein -
C9E60_RS12905 () 2521382..2521681 - 300 WP_001240334.1 hypothetical protein -
C9E60_RS12910 () 2522034..2522312 - 279 WP_001303511.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
C9E60_RS12915 () 2522314..2522505 - 192 WP_001302048.1 hypothetical protein Antitoxin Detail
C9E60_RS12920 () 2522526..2522897 - 372 WP_001169686.1 hypothetical protein -
C9E60_RS12925 () 2522995..2523297 + 303 WP_000172738.1 transcriptional regulator -
C9E60_RS12930 () 2523294..2523719 + 426 WP_000693943.1 Rha family transcriptional regulator -
C9E60_RS12935 () 2523742..2524704 + 963 WP_000095670.1 helix-turn-helix domain-containing protein -
C9E60_RS12940 () 2524711..2525451 + 741 WP_000788936.1 ATP-binding protein -
C9E60_RS12945 () 2525477..2526246 + 770 Protein_2474 DUF1627 domain-containing protein -
C9E60_RS12950 () 2526262..2526657 + 396 WP_001118159.1 DUF977 family protein -
C9E60_RS12955 () 2526714..2527298 + 585 WP_000206793.1 DUF551 domain-containing protein -
C9E60_RS12960 () 2527414..2527518 + 105 WP_001278450.1 hypothetical protein -
C9E60_RS12965 () 2527764..2527919 + 156 WP_001303917.1 type I toxin-antitoxin system toxin HokD -
C9E60_RS12970 () 2528087..2528365 + 279 WP_012779366.1 hypothetical protein -
C9E60_RS12975 () 2528367..2529416 + 1050 WP_001265161.1 DUF968 domain-containing protein -
C9E60_RS12980 () 2529429..2529788 + 360 WP_001217455.1 RusA family crossover junction endodeoxyribonuclease -
C9E60_RS12985 () 2529785..2530474 + 690 WP_001059381.1 antiterminator -
C9E60_RS13010 () 2531111..2531539 + 429 WP_001303509.1 tellurite resistance protein -
C9E60_RS13015 () 2531536..2531791 + 256 Protein_2484 DUF3927 family protein -
C9E60_RS13020 () 2532018..2533868 + 1851 WP_024748470.1 SASA family carbohydrate esterase -
C9E60_RS13025 () 2534308..2534523 + 216 WP_024180155.1 class II holin family protein -
C9E60_RS13030 () 2534528..2534872 + 345 WP_000731259.1 YdfR family protein -
C9E60_RS13035 () 2534923..2535456 + 534 WP_000992137.1 lysozyme -
C9E60_RS13040 () 2535725..2536294 + 570 WP_001056806.1 hypothetical protein -
C9E60_RS13045 () 2536294..2536440 + 147 WP_000539792.1 hypothetical protein -
C9E60_RS13055 () 2536668..2536853 + 186 WP_012816791.1 Rz1 family lipoprotein -
C9E60_RS13060 () 2537278..2537505 - 228 WP_000095736.1 DUF3950 domain-containing protein -
C9E60_RS13065 () 2537547..2537912 + 366 WP_015994246.1 HNH endonuclease -
C9E60_RS13075 () 2538201..2538764 + 564 WP_001303051.1 terminase small subunit -
C9E60_RS13080 () 2538761..2540422 + 1662 WP_024748457.1 terminase large subunit -
C9E60_RS13085 () 2540486..2542423 + 1938 WP_000172999.1 phage major capsid protein -
C9E60_RS13090 () 2542468..2542689 + 222 WP_001063099.1 hypothetical protein -
C9E60_RS13095 () 2542635..2545136 + 2502 WP_000267292.1 phage portal protein -
C9E60_RS13100 () 2545216..2545542 + 327 WP_000126019.1 head-tail connector protein -
C9E60_RS13105 () 2545552..2545902 + 351 WP_001007901.1 phage head closure protein -
C9E60_RS13110 () 2545899..2546345 + 447 WP_000573374.1 HK97 gp10 family phage protein -
C9E60_RS13115 () 2546342..2546686 + 345 WP_000133388.1 DUF3168 domain-containing protein -
C9E60_RS13120 () 2546745..2547461 + 717 WP_001275508.1 tail protein -
C9E60_RS13125 () 2547467..2547841 + 375 WP_001030063.1 phage tail assembly chaperone -
C9E60_RS13130 () 2547937..2548146 + 210 WP_001453698.1 DUF4035 domain-containing protein -
C9E60_RS13135 () 2548199..2551441 + 3243 WP_064261924.1 phage tail tape measure protein -
C9E60_RS13140 () 2551434..2551775 + 342 WP_000807954.1 phage tail protein -
C9E60_RS13145 () 2551775..2552473 + 699 WP_001303038.1 phage minor tail protein L -
C9E60_RS13150 () 2552484..2553227 + 744 WP_046671488.1 C40 family peptidase -
C9E60_RS13155 () 2553173..2553805 + 633 WP_050439450.1 tail assembly protein -
C9E60_RS13160 () 2554148..2555323 + 1176 WP_001304109.1 host specificity protein J -
C9E60_RS13165 () 2555275..2557620 + 2346 WP_129137390.1 host specificity protein J -
C9E60_RS13170 () 2557688..2558287 + 600 WP_001228304.1 hypothetical protein VF
C9E60_RS13175 () 2558439..2559752 + 1314 WP_024748516.1 ISNCY family transposase KIS Transposase
C9E60_RS13180 () 2559754..2560023 + 270 WP_001023474.1 phage tail fiber C-terminal domain-containing protein -
C9E60_RS13185 () 2560136..2560710 + 575 Protein_2516 hypothetical protein VF
C9E60_RS13190 () 2561050..2562375 - 1326 WP_001025672.1 hypothetical protein VF
C9E60_RS13200 () 2563036..2563950 - 915 Protein_2518 hypothetical protein ; Integrase Integrase
C9E60_RS13205 () 2563964..2564074 + 111 Protein_2519 type III effector -
C9E60_RS13210 () 2564121..2564755 - 635 Protein_2520 IS256 family transposase ISEic2 Transposase
C9E60_RS13215 () 2565040..2566578 - 1539 WP_000998048.1 IS66 family transposase ISEc8 Transposase
C9E60_RS13220 () 2566628..2566975 - 348 WP_000612591.1 IS66 family transposase ISEc8 Transposase
C9E60_RS13225 () 2566972..2567352 - 381 WP_001171554.1 IS66 family transposase ISEc8 Transposase
C9E60_RS13230 () 2567692..2567970 - 279 WP_001303943.1 hypothetical protein -
C9E60_RS13235 () 2568398..2568544 + 147 WP_001414184.1 hypothetical protein -
C9E60_RS13240 () 2568681..2569328 - 648 WP_001303944.1 hypothetical protein VF
C9E60_RS13245 () 2569512..2570102 + 591 WP_001144877.1 hypothetical protein VF
C9E60_RS13250 () 2570321..2571377 - 1057 Protein_2528 IS630 family transposase -
C9E60_RS13255 () 2571609..2572259 + 651 WP_001345079.1 hypothetical protein VF
C9E60_RS13260 () 2572418..2572653 + 236 Protein_2530 IS3 family transposase -
C9E60_RS13270 () 2573388..2573513 + 126 Protein_2531 outer membrane protein OmpW -
C9E60_RS13275 () 2573559..2574689 - 1131 WP_001500821.1 hypothetical protein ; Integrase Integrase
C9E60_RS13280 () 2574667..2574915 - 249 WP_000113189.1 excisionase -
C9E60_RS13285 () 2574980..2575747 - 768 WP_194165168.1 exonuclease -
C9E60_RS13290 () 2575785..2576998 + 1214 WP_162829202.1 IS3 family transposase IS1203 Transposase
C9E60_RS13295 () 2577037..2578737 - 1701 Protein_2536 exonuclease -
C9E60_RS13300 () 2578830..2579018 - 189 WP_000092782.1 DUF1482 family protein -
C9E60_RS13305 () 2579015..2579203 - 189 WP_000450222.1 cell division inhibitor -
C9E60_RS13315 () 2579768..2579977 + 210 WP_001133037.1 hypothetical protein -
C9E60_RS13320 () 2579978..2580616 - 639 WP_000394548.1 hypothetical protein -
C9E60_RS13325 () 2580628..2580780 - 153 WP_000380316.1 DUF1391 family protein -
C9E60_RS13330 () 2581073..2581411 - 339 WP_001416688.1 peptidase S24 -
C9E60_RS13335 () 2581803..2582045 + 243 WP_000747948.1 hypothetical protein -
C9E60_RS13340 () 2582029..2582454 + 426 WP_000693878.1 Rha family transcriptional regulator -
C9E60_RS13345 () 2582523..2583566 + 1044 WP_001262402.1 hypothetical protein -
C9E60_RS13350 () 2583559..2584020 + 462 WP_000139447.1 replication protein -
C9E60_RS13355 () 2584054..2584770 + 717 WP_000450627.1 DUF1627 domain-containing protein -
C9E60_RS13360 () 2584803..2585084 + 282 WP_000603384.1 DNA-binding protein -
C9E60_RS13365 () 2585081..2585308 + 228 WP_000699809.1 hypothetical protein -
C9E60_RS13370 () 2585301..2585612 + 312 WP_001289673.1 hypothetical protein -
C9E60_RS13375 () 2585740..2585958 + 219 WP_000683609.1 DUF4014 family protein -
C9E60_RS13380 () 2585960..2586517 + 558 WP_000104474.1 DUF551 domain-containing protein -
- () 2586738..2586796 - 59 - - Antitoxin Detail
C9E60_RS13385 () 2586808..2586963 + 156 WP_000813258.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
C9E60_RS13390 () 2587083..2587427 + 345 WP_000756596.1 YgiW/YdeI family stress tolerance OB fold protein -
C9E60_RS13395 () 2587549..2587821 + 273 WP_000191872.1 hypothetical protein -
C9E60_RS13400 () 2587823..2588872 + 1050 WP_001265229.1 DUF968 domain-containing protein -
C9E60_RS13405 () 2588885..2589190 + 306 WP_001217444.1 RusA family crossover junction endodeoxyribonuclease -
C9E60_RS13410 () 2589253..2589807 + 555 WP_000640035.1 DUF1133 family protein -
C9E60_RS13415 () 2590032..2590229 + 198 WP_000917763.1 hypothetical protein -
C9E60_RS13420 () 2590365..2591078 + 714 WP_000301797.1 helix-turn-helix domain-containing protein -
C9E60_RS13435 () 2591529..2591960 + 432 WP_001302123.1 tellurite resistance protein -
C9E60_RS13440 () 2591957..2592212 + 256 Protein_2562 DUF3927 family protein -
C9E60_RS13445 () 2592438..2594288 + 1851 WP_000023184.1 SASA family carbohydrate esterase -
C9E60_RS13450 () 2594728..2594943 + 216 WP_024180155.1 class II holin family protein -
C9E60_RS13455 () 2594948..2595292 + 345 WP_000731259.1 YdfR family protein -
C9E60_RS13460 () 2595343..2595876 + 534 WP_000992137.1 lysozyme -
C9E60_RS13465 () 2596147..2596716 + 570 WP_001056806.1 hypothetical protein -
C9E60_RS13470 () 2596716..2596862 + 147 WP_000539795.1 hypothetical protein -
C9E60_RS13475 () 2597085..2597270 + 186 WP_001208680.1 Rz1 family lipoprotein -
C9E60_RS13480 () 2597796..2598110 + 315 WP_001302717.1 PerC family transcriptional regulator -
C9E60_RS13485 () 2598192..2598416 - 225 WP_001303940.1 YlcI/YnfO family protein -
C9E60_RS13495 () 2598803..2599348 + 546 WP_000867498.1 terminase small subunit -
C9E60_RS13500 () 2599323..2601248 + 1926 WP_024748469.1 phage terminase large subunit family protein -
C9E60_RS13505 () 2601245..2601451 + 207 WP_000198153.1 gpW family protein -
C9E60_RS13510 () 2601448..2603049 + 1602 WP_001301524.1 phage portal protein -
C9E60_RS13515 () 2603030..2604349 + 1320 WP_000123254.1 S49 family peptidase -
C9E60_RS13520 () 2604359..2604691 + 333 WP_001295978.1 head decoration protein -
C9E60_RS13525 () 2604747..2605772 + 1026 WP_024748468.1 major capsid protein -
C9E60_RS13530 () 2605814..2606212 + 399 WP_000158906.1 DNA-packaging protein FI -
C9E60_RS13535 () 2606224..2606577 + 354 WP_000753016.1 head-tail joining protein -
C9E60_RS13540 () 2606592..2607125 + 534 WP_000975020.1 phage tail protein -
C9E60_RS13545 () 2607122..2607517 + 396 WP_000683063.1 phage minor tail U family protein -
C9E60_RS13550 () 2607525..2608277 + 753 WP_000235090.1 Ig domain-containing protein -
C9E60_RS13555 () 2608291..2608713 + 423 WP_000479046.1 phage minor tail protein G -
C9E60_RS13560 () 2608740..2609153 + 414 WP_000533440.1 phage tail assembly protein T -
C9E60_RS13565 () 2609134..2611746 + 2613 WP_000081804.1 phage tail tape measure protein -
C9E60_RS13570 () 2611743..2612072 + 330 WP_000847298.1 phage tail protein -
C9E60_RS13575 () 2612072..2612770 + 699 WP_001151105.1 phage minor tail protein L -
C9E60_RS13580 () 2612781..2613524 + 744 WP_000194801.1 C40 family peptidase -
C9E60_RS13585 () 2613470..2614102 + 633 WP_129137391.1 tail assembly protein -
C9E60_RS13590 () 2614349..2617828 + 3480 WP_000514788.1 host specificity protein J -
C9E60_RS13595 () 2617896..2618495 + 600 WP_001230508.1 hypothetical protein VF
C9E60_RS13600 () 2618560..2619873 + 1314 WP_137049508.1 ISNCY family transposase KIS Transposase
C9E60_RS13605 () 2619875..2620144 + 270 WP_001023407.1 phage tail fiber C-terminal domain-containing protein -
C9E60_RS13610 () 2620258..2620833 + 576 WP_001131658.1 hypothetical protein VF
C9E60_RS13615 () 2620906..2621535 + 630 WP_001356599.1 hypothetical protein VF
C9E60_RS13620 () 2621617..2622258 + 642 WP_001143804.1 hypothetical protein VF
C9E60_RS13630 () 2622420..2622662 - 243 WP_001120551.1 DinI-like family protein -
C9E60_RS13635 () 2622794..2624077 + 1284 Protein_2599 MHS family MFS transporter YdfJ -
C9E60_RS13640 () 2624166..2625626 + 1461 WP_000527769.1 mannitol dehydrogenase family protein -
C9E60_RS13645 () 2625662..2625865 - 204 WP_000214712.1 putative selenium delivery protein YdfZ -
C9E60_RS13650 () 2626042..2626728 - 687 WP_000215549.1 DNA-binding transcriptional regulator YdfH -
C9E60_RS13655 () 2626817..2627563 - 747 WP_000636568.1 hypothetical protein VF
C9E60_RS13660 () 2627700..2629745 + 2046 WP_001302117.1 peptidyl-dipeptidase Dcp -
C9E60_RS13665 () 2629790..2630308 - 519 WP_001024796.1 2-oxo-tetronate isomerase -
C9E60_RS13670 () 2630584..2630976 + 393 WP_000671724.1 YdeI family stress tolerance OB fold protein -
C9E60_RS13675 () 2631231..2632121 + 891 WP_000592852.1 diguanylate cyclase DgcZ -
C9E60_RS28695 () 2632236..2632340 - 105 WP_211180496.1 protein MgtT -
C9E60_RS13680 () 2632340..2632435 - 96 WP_000901365.1 protein MgtS -
C9E60_RS13685 () 2632543..2633514 - 972 WP_001310251.1 transcriptional regulator FtrA -
C9E60_RS13690 () 2633609..2634004 + 396 WP_001271101.1 rhodanese -
C9E60_RS13695 () 2634045..2635232 - 1188 WP_001054199.1 efflux MFS transporter YdeE -
C9E60_RS13700 () 2635427..2636326 + 900 WP_000087233.1 O-acetylserine/cysteine exporter -
C9E60_RS13705 () 2636357..2636575 - 219 WP_000803524.1 multiple antibiotic resistance protein MarB -
C9E60_RS13710 () 2636607..2636990 - 384 WP_000091199.1 hypothetical protein VF
C9E60_RS13715 () 2637010..2637444 - 435 WP_000843419.1 multiple antibiotic resistance transcriptional regulator MarR -
C9E60_RS13720 () 2637656..2638321 + 666 WP_000885016.1 NAAT family transporter MarC -
C9E60_RS13725 () 2638346..2639536 - 1191 WP_000210801.1 L-arabinose MFS transporter -
C9E60_RS13730 () 2639687..2640802 - 1116 Protein_2619 putative protein YneK -
C9E60_RS13735 () 2640880..2641761 - 882 WP_000366470.1 hypothetical protein VF
C9E60_RS13740 () 2641862..2643250 + 1389 WP_000156618.1 succinate-semialdehyde dehydrogenase -
C9E60_RS13745 () 2643314..2644240 + 927 WP_000257409.1 glutaminase B -
C9E60_RS13750 () 2644240..2644599 + 360 WP_001191021.1 DUF4186 domain-containing protein -
C9E60_RS13755 () 2644738..2646156 + 1419 WP_000558061.1 GGDEF domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance