MGE detailed information
MGE type: Prophage MGE length: 87267 bp
Accession: NZ_CP028626 Location: 4311338..4398604 Organism: Escherichia coli strain 137 Replicon: chromosome
Accession: NZ_CP028626 Location: 4311338..4398604 Organism: Escherichia coli strain 137 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E61_RS22160 () | 4307630..4308586 | + | 957 | WP_000121344.1 | molybdenum cofactor insertion chaperone PaoD | - |
| C9E61_RS22165 () | 4308765..4309892 | - | 1128 | WP_000171065.1 | MFS transporter | - |
| C9E61_RS22170 () | 4310034..4311092 | - | 1059 | WP_001303808.1 | alpha/beta hydrolase | - |
| C9E61_RS22175 () | 4311338..4312240 | + | 903 | WP_010917758.1 | hypothetical protein | VF |
| C9E61_RS22185 () | 4312943..4313221 | - | 279 | WP_001301751.1 | hypothetical protein | - |
| C9E61_RS22190 () | 4313388..4314110 | - | 723 | WP_000361969.1 | hypothetical protein | VF |
| C9E61_RS22195 () | 4314209..4315108 | + | 900 | WP_000687183.1 | hypothetical protein | VF |
| C9E61_RS22200 () | 4315784..4316740 | + | 957 | WP_000205213.1 | hypothetical protein | - |
| C9E61_RS22205 () | 4316873..4319206 | - | 2334 | WP_000016225.1 | toprim domain-containing protein | - |
| C9E61_RS22210 () | 4319220..4319543 | - | 324 | WP_000562750.1 | DUF5375 family protein | - |
| C9E61_RS22215 () | 4319543..4319764 | - | 222 | WP_001071227.1 | hypothetical protein | - |
| C9E61_RS22220 () | 4319761..4320318 | - | 558 | WP_000973389.1 | host cell division inhibitor Icd-like protein | - |
| C9E61_RS22225 () | 4320315..4320575 | - | 261 | WP_001244581.1 | AlpA family transcriptional regulator | - |
| C9E61_RS22230 () | 4321509..4322261 | + | 753 | WP_000154958.1 | septation initiation protein | - |
| C9E61_RS22235 () | 4322258..4322809 | + | 552 | WP_000968317.1 | Polarity suppression protein | - |
| C9E61_RS22240 () | 4322815..4323087 | + | 273 | WP_001185340.1 | ogr/Delta-like zinc finger family protein | - |
| C9E61_RS22250 () | 4323497..4324063 | - | 567 | WP_000350115.1 | hypothetical protein | - |
| C9E61_RS22255 () | 4324063..4324653 | - | 591 | WP_000647284.1 | hypothetical protein | - |
| C9E61_RS22260 () | 4324684..4325316 | - | 633 | WP_000999326.1 | AAA family ATPase | - |
| C9E61_RS22265 () | 4325309..4325767 | - | 459 | WP_000251694.1 | hypothetical protein | - |
| C9E61_RS22270 () | 4325767..4326384 | - | 618 | WP_001303996.1 | hypothetical protein | - |
| C9E61_RS22275 () | 4326357..4326773 | - | 417 | WP_000082144.1 | hypothetical protein | - |
| C9E61_RS22280 () | 4326777..4327958 | - | 1182 | WP_001130487.1 | hypothetical protein ; Integrase | Integrase |
| C9E61_RS22285 () | 4328445..4328879 | + | 435 | Protein_4239 | IS3 family transposase ISEc48 | Transposase |
| C9E61_RS22290 () | 4328921..4329664 | - | 744 | WP_000246059.1 | AraC family transcriptional regulator | - |
| C9E61_RS22295 () | 4330489..4331262 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| C9E61_RS22300 () | 4331323..4331877 | - | 555 | WP_000905124.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| C9E61_RS22305 () | 4331908..4332318 | + | 411 | WP_001145350.1 | hypothetical protein | - |
| C9E61_RS22310 () | 4332339..4332782 | + | 444 | WP_001008234.1 | tail fiber assembly protein | - |
| C9E61_RS22315 () | 4332754..4333356 | - | 603 | WP_000368084.1 | tail fiber assembly protein | - |
| C9E61_RS22320 () | 4333356..4334126 | - | 771 | WP_000554706.1 | phage tail protein | - |
| C9E61_RS22325 () | 4334130..4334714 | - | 585 | WP_000383550.1 | YmfQ family protein | - |
| C9E61_RS22330 () | 4334705..4335763 | - | 1059 | WP_000785302.1 | baseplate J/gp47 family protein | - |
| C9E61_RS22335 () | 4335750..4336175 | - | 426 | WP_000424732.1 | phage GP46 family protein | - |
| C9E61_RS22340 () | 4336175..4336723 | - | 549 | WP_001259066.1 | phage baseplate assembly protein V | - |
| C9E61_RS22345 () | 4336723..4337802 | - | 1080 | WP_000999513.1 | baseplate protein | - |
| C9E61_RS22350 () | 4337799..4339127 | - | 1329 | WP_000219910.1 | DNA circularization N-terminal domain-containing protein | - |
| C9E61_RS22355 () | 4339188..4341023 | - | 1836 | WP_000807197.1 | phage tail tape measure protein | - |
| C9E61_RS22365 () | 4341165..4341434 | - | 270 | WP_000661054.1 | phage tail assembly protein | - |
| C9E61_RS22370 () | 4341434..4341790 | - | 357 | WP_000090993.1 | phage tail tube protein | - |
| C9E61_RS22375 () | 4341790..4343286 | - | 1497 | WP_000155728.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| C9E61_RS22380 () | 4343270..4343440 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| C9E61_RS22385 () | 4343449..4344009 | - | 561 | WP_000779288.1 | hypothetical protein | - |
| C9E61_RS22390 () | 4344006..4344512 | - | 507 | WP_000224836.1 | hypothetical protein | - |
| C9E61_RS22395 () | 4344487..4344897 | - | 411 | WP_000702395.1 | phage head closure protein | - |
| C9E61_RS22400 () | 4344894..4345217 | - | 324 | WP_000924828.1 | head-tail connector protein | - |
| C9E61_RS22405 () | 4345296..4346525 | - | 1230 | WP_000766100.1 | phage major capsid protein | - |
| C9E61_RS22410 () | 4346536..4347138 | - | 603 | WP_000999805.1 | HK97 family phage prohead protease | - |
| C9E61_RS22415 () | 4347131..4348357 | - | 1227 | WP_000923141.1 | phage portal protein | - |
| C9E61_RS28560 () | 4348347..4348508 | - | 162 | WP_000838374.1 | hypothetical protein | - |
| C9E61_RS22420 () | 4348505..4350001 | - | 1497 | WP_128484532.1 | terminase large subunit | - |
| C9E61_RS22425 () | 4350235..4350729 | - | 495 | WP_000929175.1 | phage terminase small subunit P27 family | - |
| C9E61_RS22430 () | 4350855..4351205 | - | 351 | WP_001135207.1 | HNH endonuclease | - |
| C9E61_RS22440 () | 4351731..4352024 | + | 294 | WP_000738423.1 | increased serum survival lipoprotein Iss | - |
| C9E61_RS22445 () | 4352115..4352297 | - | 183 | WP_001228695.1 | prophage lysis lipoprotein RzoD | - |
| C9E61_RS22450 () | 4352514..4352990 | - | 477 | WP_001197766.1 | glycoside hydrolase family protein | - |
| C9E61_RS22455 () | 4352994..4353329 | - | 336 | WP_001120501.1 | phage holin, lambda family | - |
| C9E61_RS22460 () | 4353466..4353759 | - | 294 | WP_001449601.1 | site-specific DNA-methyltransferase | - |
| C9E61_RS22465 () | 4354038..4354271 | - | 234 | WP_001310393.1 | hypothetical protein | - |
| C9E61_RS22470 () | 4354415..4354954 | - | 540 | WP_000484663.1 | hypothetical protein | - |
| C9E61_RS22475 () | 4355169..4355921 | - | 753 | WP_001008431.1 | antitermination protein | - |
| C9E61_RS22480 () | 4355935..4356924 | - | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| C9E61_RS22485 () | 4356932..4357741 | - | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| C9E61_RS22490 () | 4357761..4358150 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E61_RS22495 () | 4358147..4358473 | - | 327 | WP_000210141.1 | LexA family transcriptional regulator | - |
| C9E61_RS22500 () | 4358470..4359123 | - | 654 | WP_001303054.1 | phage N-6-adenine-methyltransferase | - |
| C9E61_RS22505 () | 4359123..4359617 | - | 495 | WP_072141203.1 | PerC family transcriptional regulator | - |
| C9E61_RS22510 () | 4359614..4360555 | - | 942 | WP_000104949.1 | helix-turn-helix domain-containing protein | - |
| C9E61_RS22515 () | 4360545..4360724 | - | 180 | WP_001250269.1 | DUF4222 domain-containing protein | - |
| C9E61_RS22520 () | 4360900..4361451 | - | 552 | WP_000515845.1 | protein YmfL | - |
| C9E61_RS22525 () | 4361444..4361704 | - | 261 | WP_001191674.1 | helix-turn-helix transcriptional regulator | - |
| C9E61_RS22535 () | 4361802..4362494 | + | 693 | WP_001020634.1 | helix-turn-helix transcriptional regulator | - |
| C9E61_RS22540 () | 4362772..4363068 | + | 297 | WP_000917896.1 | hypothetical protein | - |
| C9E61_RS22560 () | 4365059..4365595 | + | 537 | WP_000008235.1 | 5'-deoxynucleotidase | - |
| C9E61_RS22565 () | 4365586..4365948 | + | 363 | WP_001242749.1 | phage protein | - |
| C9E61_RS22570 () | 4365948..4366253 | + | 306 | WP_000206732.1 | hypothetical protein | - |
| C9E61_RS22580 () | 4366480..4367643 | + | 1164 | WP_000051887.1 | hypothetical protein ; Integrase | Integrase |
| C9E61_RS22590 () | 4367848..4369101 | - | 1254 | WP_000893282.1 | glutamate-5-semialdehyde dehydrogenase | - |
| C9E61_RS22595 () | 4369113..4370216 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| C9E61_RS22600 () | 4370504..4371559 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| C9E61_RS22605 () | 4371598..4371999 | - | 402 | WP_000174701.1 | sigma factor-binding protein Crl | - |
| C9E61_RS22610 () | 4372057..4373301 | - | 1245 | WP_000189536.1 | esterase FrsA | - |
| - () | 4372717..4372797 | - | 81 | NuclAT_11 | - | - |
| - () | 4372717..4372797 | - | 81 | NuclAT_11 | - | - |
| - () | 4372717..4372797 | - | 81 | NuclAT_11 | - | - |
| - () | 4372717..4372797 | - | 81 | NuclAT_11 | - | - |
| C9E61_RS22615 () | 4373393..4373851 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| C9E61_RS22620 () | 4374112..4375569 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| C9E61_RS22625 () | 4375626..4376147 | - | 522 | Protein_4301 | peptide chain release factor H | - |
| C9E61_RS22630 () | 4376146..4376349 | - | 204 | Protein_4302 | RNA ligase RtcB family protein | - |
| C9E61_RS22635 () | 4376668..4377120 | - | 453 | WP_001059871.1 | GNAT family N-acetyltransferase | - |
| C9E61_RS22640 () | 4377130..4377528 | - | 399 | WP_001263495.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| C9E61_RS22645 () | 4377531..4377824 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| C9E61_RS22650 () | 4377876..4378931 | - | 1056 | WP_001226186.1 | DNA polymerase IV | - |
| C9E61_RS22655 () | 4379002..4379787 | - | 786 | WP_000207556.1 | hypothetical protein | VF |
| C9E61_RS22660 () | 4379759..4381471 | + | 1713 | Protein_4308 | hypothetical protein | VF |
| C9E61_RS22665 () | 4381616..4382113 | - | 498 | Protein_4309 | REP-associated tyrosine transposase RayT | - |
| C9E61_RS22670 () | 4382289..4383062 | - | 774 | WP_000543891.1 | hypothetical protein | VF |
| C9E61_RS22675 () | 4383248..4383508 | + | 261 | WP_000729705.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| C9E61_RS22680 () | 4383527..4383787 | + | 261 | WP_001303998.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| C9E61_RS22685 () | 4383943..4384683 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| C9E61_RS22690 () | 4384654..4385421 | - | 768 | WP_001301698.1 | class II glutamine amidotransferase | - |
| C9E61_RS22695 () | 4385526..4386104 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| C9E61_RS22700 () | 4386344..4388788 | + | 2445 | WP_000973071.1 | hypothetical protein | VF |
| C9E61_RS22705 () | 4388831..4389277 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| C9E61_RS22710 () | 4389458..4390228 | + | 771 | WP_001118031.1 | 2-oxoglutaramate amidase | - |
| C9E61_RS22715 () | 4390346..4391518 | - | 1173 | WP_000027427.1 | ISAs1 family transposase ISEc26 | Transposase |
| C9E61_RS22720 () | 4391599..4391784 | + | 186 | WP_120795385.1 | protein YncO | - |
| C9E61_RS22725 () | 4391699..4391962 | - | 264 | WP_000247943.1 | hypothetical protein | - |
| C9E61_RS22730 () | 4392164..4396387 | - | 4224 | WP_000509142.1 | hypothetical protein | VF |
| C9E61_RS22735 () | 4396463..4398604 | - | 2142 | WP_000103335.1 | hypothetical protein | VF |
| C9E61_RS22740 () | 4398814..4399332 | - | 519 | WP_001142958.1 | Hcp family type VI secretion system effector | - |
| C9E61_RS22745 () | 4400029..4400529 | + | 501 | WP_000037399.1 | type VI secretion system contractile sheath small subunit | - |
| C9E61_RS22750 () | 4400564..4400788 | + | 225 | WP_000123970.1 | hypothetical protein | - |
| C9E61_RS22755 () | 4400839..4402230 | + | 1392 | WP_000056994.1 | type VI secretion system contractile sheath large subunit | - |
| C9E61_RS22760 () | 4402321..4402734 | + | 414 | WP_000599596.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|