MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93171 bp
Accession: NZ_CP028622 Location: 1..93171 Organism: Escherichia coli strain 139 Replicon: plasmid pTA139
Accession: NZ_CP028622 Location: 1..93171 Organism: Escherichia coli strain 139 Replicon: plasmid pTA139
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E63_RS27830 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| C9E63_RS27845 () | 1781..2065 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C9E63_RS27850 () | 2065..2340 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E63_RS27855 () | 2435..2641 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| C9E63_RS27860 () | 2741..2956 | - | 216 | Protein_5 | transposase | - |
| C9E63_RS27865 () | 3000..3566 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| C9E63_RS27870 () | 3566..3982 | - | 417 | Protein_7 | IS91 family transposase | - |
| C9E63_RS27875 () | 3982..4167 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| C9E63_RS27880 () | 4344..6554 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| C9E63_RS27885 () | 6598..6987 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C9E63_RS27890 () | 7044..8032 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| C9E63_RS27900 () | 8213..12115 | + | 3903 | WP_001034097.1 | Serine protease EspP | VF |
| C9E63_RS27905 () | 12371..12852 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| C9E63_RS27915 () | 14293..15114 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C9E63_RS27920 () | 15114..16220 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C9E63_RS27925 () | 16310..18031 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C9E63_RS27930 () | 18105..19103 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C9E63_RS27935 () | 19156..19344 | + | 189 | Protein_18 | hypothetical protein | - |
| C9E63_RS27940 () | 19448..19534 | - | 87 | Protein_19 | IS3 family transposase ISEhe3 | Transposase |
| C9E63_RS27950 () | 19985..22681 | + | 2697 | WP_072141201.1 | Metalloprotease StcE | VF |
| C9E63_RS27955 () | 22768..23643 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| C9E63_RS27960 () | 23644..25611 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| C9E63_RS27965 () | 25611..27116 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| C9E63_RS27970 () | 27118..28341 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| C9E63_RS27975 () | 28372..28806 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| C9E63_RS27980 () | 28803..29357 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| C9E63_RS27985 () | 29372..29719 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| C9E63_RS27990 () | 29716..30315 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| C9E63_RS27995 () | 30312..31289 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| C9E63_RS28000 () | 31328..32500 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| C9E63_RS28005 () | 32487..32999 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| C9E63_RS28010 () | 33057..33890 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| C9E63_RS28015 () | 33982..34383 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| C9E63_RS28020 () | 34562..35733 | + | 1172 | Protein_34 | IS3 family transposase ISLad1 | Transposase |
| C9E63_RS28030 () | 36274..36789 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C9E63_RS28035 () | 36791..39787 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| C9E63_RS28040 () | 39837..41957 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C9E63_RS28045 () | 41961..43400 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| C9E63_RS28575 () | 43521..44013 | + | 493 | Protein_39 | Transcriptional repressor MprA | VF |
| C9E63_RS28065 () | 44144..44374 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| C9E63_RS28070 () | 44495..45235 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| C9E63_RS28075 () | 45520..46497 | - | 978 | WP_001508846.1 | RepB family plasmid replication initiator protein | - |
| C9E63_RS28085 () | 46905..47105 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| C9E63_RS28090 () | 47102..47722 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| C9E63_RS28095 () | 47719..48402 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| C9E63_RS28100 () | 48861..49079 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C9E63_RS28105 () | 49081..49386 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C9E63_RS28110 () | 49387..50193 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| C9E63_RS28125 () | 52205..52960 | + | 756 | WP_000852148.1 | replication initiation protein RepE | - |
| C9E63_RS28130 () | 53548..54714 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| C9E63_RS28135 () | 54714..55685 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C9E63_RS28145 () | 56294..57196 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| C9E63_RS28150 () | 57200..57505 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| C9E63_RS28155 () | 57582..58265 | + | 684 | WP_000085945.1 | DNA methylase | - |
| C9E63_RS28160 () | 58266..58487 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| C9E63_RS28165 () | 58381..58935 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| C9E63_RS28580 () | 58981..59757 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| C9E63_RS28180 () | 60298..60600 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| C9E63_RS28185 () | 60647..61069 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| C9E63_RS28190 () | 61066..61257 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C9E63_RS28585 () | 61227..61736 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| C9E63_RS28205 () | 62253..62483 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C9E63_RS28210 () | 62535..63896 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| C9E63_RS28215 () | 63943..64506 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| C9E63_RS28220 () | 64592..65041 | - | 450 | WP_001451816.1 | hypothetical protein | - |
| C9E63_RS28225 () | 65111..65317 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| C9E63_RS28230 () | 65343..65795 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| C9E63_RS28235 () | 65852..66085 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| C9E63_RS28240 () | 66151..68109 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| C9E63_RS28245 () | 68164..68598 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| C9E63_RS28250 () | 68595..69356 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 69325..69523 | + | 199 | NuclAT_0 | - | - |
| - () | 69325..69523 | + | 199 | NuclAT_0 | - | - |
| - () | 69325..69523 | + | 199 | NuclAT_0 | - | - |
| - () | 69325..69523 | + | 199 | NuclAT_0 | - | - |
| C9E63_RS28255 () | 69588..69746 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E63_RS28260 () | 69880..71901 | + | 2022 | Protein_74 | hypothetical protein | Relaxase |
| C9E63_RS28265 () | 71969..72400 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| C9E63_RS28275 () | 73037..73386 | - | 350 | Protein_76 | IS3 family transposase IS3H | Transposase |
| C9E63_RS28280 () | 73480..73743 | + | 264 | Protein_77 | IS21 family transposase ISEc62 | Transposase |
| C9E63_RS28285 () | 73783..73903 | + | 121 | Protein_78 | IS21 family transposase ISEc62 | Transposase |
| C9E63_RS28290 () | 73900..74052 | + | 153 | Protein_79 | IS1 family transposase | - |
| C9E63_RS28295 () | 74159..83668 | + | 9510 | WP_000581719.1 | Toxin B | VF |
| C9E63_RS28300 () | 83742..83966 | + | 225 | Protein_81 | IS3 family transposase IS3H | Transposase |
| C9E63_RS28305 () | 84034..84204 | - | 171 | Protein_82 | IS3 family transposase IS1203 | Transposase |
| C9E63_RS28310 () | 84211..84462 | - | 252 | Protein_83 | IS3 family transposase IS1203 | Transposase |
| C9E63_RS28315 () | 84663..85043 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| C9E63_RS28320 () | 85040..85387 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C9E63_RS28325 () | 85437..86975 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| C9E63_RS28330 () | 87026..88357 | + | 1332 | Protein_87 | Multifunctional conjugation protein TraI | Relaxase |
| C9E63_RS28335 () | 88377..89123 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| C9E63_RS28340 () | 89182..90042 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| C9E63_RS28345 () | 90145..90705 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| C9E63_RS28350 () | 90838..91050 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| C9E63_RS28355 () | 91295..91756 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| C9E63_RS28360 () | 91802..92011 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| C9E63_RS28365 () | 92049..92387 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| C9E63_RS28370 () | 92627..92881 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|