MGE detailed information
MGE type: Prophage MGE length: 110332 bp
Accession: NZ_CP028617 Location: 2513753..2624084 Organism: Escherichia coli strain 140 Replicon: chromosome
Accession: NZ_CP028617 Location: 2513753..2624084 Organism: Escherichia coli strain 140 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E64_RS12835 () | 2511128..2513554 | - | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| C9E64_RS12840 () | 2513753..2514058 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| C9E64_RS12845 () | 2514166..2514876 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| C9E64_RS12850 () | 2514879..2515439 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| C9E64_RS12855 () | 2515474..2515815 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| C9E64_RS12860 () | 2515950..2516276 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| C9E64_RS12870 () | 2517046..2517230 | - | 185 | Protein_2460 | DUF3596 domain-containing protein | - |
| C9E64_RS12875 () | 2517265..2517516 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| C9E64_RS12880 () | 2517589..2520060 | - | 2472 | WP_000048458.1 | exonuclease | - |
| C9E64_RS12885 () | 2520153..2520344 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| C9E64_RS12890 () | 2520341..2520529 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| C9E64_RS12900 () | 2521098..2521316 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| C9E64_RS12905 () | 2521388..2521687 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| C9E64_RS12910 () | 2522040..2522318 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E64_RS12915 () | 2522320..2522511 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| C9E64_RS12920 () | 2522532..2522903 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| C9E64_RS12925 () | 2523001..2523303 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| C9E64_RS12930 () | 2523300..2523725 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| C9E64_RS12935 () | 2523748..2524710 | + | 963 | WP_000095670.1 | helix-turn-helix domain-containing protein | - |
| C9E64_RS12940 () | 2524717..2525457 | + | 741 | WP_000788936.1 | ATP-binding protein | - |
| C9E64_RS12945 () | 2525483..2526252 | + | 770 | Protein_2474 | DUF1627 domain-containing protein | - |
| C9E64_RS12950 () | 2526268..2526663 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| C9E64_RS12955 () | 2526720..2527304 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| C9E64_RS12960 () | 2527420..2527524 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| C9E64_RS12965 () | 2527770..2527925 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| C9E64_RS12970 () | 2528093..2528371 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| C9E64_RS12975 () | 2528373..2529422 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| C9E64_RS12980 () | 2529435..2529794 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E64_RS12985 () | 2529791..2530480 | + | 690 | WP_001059381.1 | antiterminator | - |
| C9E64_RS13010 () | 2531117..2531545 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| C9E64_RS13015 () | 2531542..2531797 | + | 256 | Protein_2484 | DUF3927 family protein | - |
| C9E64_RS13020 () | 2532024..2533874 | + | 1851 | WP_024748470.1 | SASA family carbohydrate esterase | - |
| C9E64_RS13025 () | 2534314..2534529 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E64_RS13030 () | 2534534..2534878 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E64_RS13035 () | 2534929..2535462 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E64_RS13040 () | 2535731..2536300 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E64_RS13045 () | 2536300..2536446 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| C9E64_RS13055 () | 2536674..2536859 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| C9E64_RS13060 () | 2537284..2537511 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| C9E64_RS13065 () | 2537553..2537918 | + | 366 | WP_015994246.1 | HNH endonuclease | - |
| C9E64_RS13075 () | 2538208..2538771 | + | 564 | WP_001303051.1 | terminase small subunit | - |
| C9E64_RS13080 () | 2538768..2540429 | + | 1662 | WP_024748457.1 | terminase large subunit | - |
| C9E64_RS13085 () | 2540493..2542430 | + | 1938 | WP_000172999.1 | phage major capsid protein | - |
| C9E64_RS13090 () | 2542475..2542696 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| C9E64_RS13095 () | 2542642..2545143 | + | 2502 | WP_000267292.1 | phage portal protein | - |
| C9E64_RS13100 () | 2545223..2545549 | + | 327 | WP_000126019.1 | head-tail connector protein | - |
| C9E64_RS13105 () | 2545559..2545909 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| C9E64_RS13110 () | 2545906..2546352 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| C9E64_RS13115 () | 2546349..2546693 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| C9E64_RS13120 () | 2546752..2547468 | + | 717 | WP_001275508.1 | tail protein | - |
| C9E64_RS13125 () | 2547474..2547848 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| C9E64_RS13130 () | 2547944..2548153 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| C9E64_RS13135 () | 2548206..2551448 | + | 3243 | WP_064261924.1 | phage tail tape measure protein | - |
| C9E64_RS13140 () | 2551441..2551782 | + | 342 | WP_000807954.1 | phage tail protein | - |
| C9E64_RS13145 () | 2551782..2552480 | + | 699 | WP_001303038.1 | phage minor tail protein L | - |
| C9E64_RS13150 () | 2552491..2553234 | + | 744 | WP_046671488.1 | C40 family peptidase | - |
| C9E64_RS13155 () | 2553180..2553812 | + | 633 | WP_050439450.1 | tail assembly protein | - |
| C9E64_RS13160 () | 2554155..2555330 | + | 1176 | WP_001304109.1 | host specificity protein J | - |
| C9E64_RS13165 () | 2555282..2557627 | + | 2346 | WP_129137390.1 | host specificity protein J | - |
| C9E64_RS13170 () | 2557695..2558294 | + | 600 | WP_001228304.1 | hypothetical protein | VF |
| C9E64_RS13175 () | 2558446..2559759 | + | 1314 | WP_024748516.1 | ISNCY family transposase KIS | Transposase |
| C9E64_RS13180 () | 2559761..2560030 | + | 270 | WP_001023474.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E64_RS13185 () | 2560143..2560717 | + | 575 | Protein_2516 | hypothetical protein | VF |
| C9E64_RS13190 () | 2561057..2562382 | - | 1326 | WP_001025672.1 | hypothetical protein | VF |
| C9E64_RS13200 () | 2563043..2563957 | - | 915 | Protein_2518 | Tyrosine recombinase XerD ; Integrase | Integrase |
| C9E64_RS13205 () | 2563971..2564081 | + | 111 | Protein_2519 | type III effector | - |
| C9E64_RS13210 () | 2564128..2564762 | - | 635 | Protein_2520 | IS256 family transposase ISEic2 | Transposase |
| C9E64_RS13215 () | 2565047..2566585 | - | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| C9E64_RS13220 () | 2566635..2566982 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| C9E64_RS13225 () | 2566979..2567359 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| C9E64_RS13230 () | 2567699..2567977 | - | 279 | WP_001303943.1 | hypothetical protein | - |
| C9E64_RS13235 () | 2568405..2568551 | + | 147 | WP_001414184.1 | hypothetical protein | - |
| C9E64_RS13240 () | 2568688..2569335 | - | 648 | WP_001303944.1 | hypothetical protein | VF |
| C9E64_RS13245 () | 2569519..2570109 | + | 591 | WP_001144877.1 | hypothetical protein | VF |
| C9E64_RS13250 () | 2570328..2571384 | - | 1057 | Protein_2528 | IS630 family transposase | - |
| C9E64_RS13255 () | 2571616..2572266 | + | 651 | WP_001345079.1 | hypothetical protein | VF |
| C9E64_RS13260 () | 2572425..2572660 | + | 236 | Protein_2530 | IS3 family transposase | - |
| C9E64_RS13270 () | 2573395..2573520 | + | 126 | Protein_2531 | outer membrane protein OmpW | - |
| C9E64_RS13275 () | 2573566..2574696 | - | 1131 | WP_001500821.1 | hypothetical protein ; Integrase | Integrase |
| C9E64_RS13280 () | 2574674..2574922 | - | 249 | WP_000113189.1 | excisionase | - |
| C9E64_RS13285 () | 2574987..2575754 | - | 768 | WP_194165168.1 | exonuclease | - |
| C9E64_RS13290 () | 2575792..2577005 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| C9E64_RS13295 () | 2577044..2578744 | - | 1701 | Protein_2536 | exonuclease | - |
| C9E64_RS13300 () | 2578837..2579025 | - | 189 | WP_000092782.1 | DUF1482 family protein | - |
| C9E64_RS13305 () | 2579022..2579210 | - | 189 | WP_000450222.1 | cell division inhibitor | - |
| C9E64_RS13315 () | 2579775..2579984 | + | 210 | WP_001133037.1 | hypothetical protein | - |
| C9E64_RS13320 () | 2579985..2580623 | - | 639 | WP_000394548.1 | hypothetical protein | - |
| C9E64_RS13325 () | 2580635..2580787 | - | 153 | WP_000380316.1 | DUF1391 family protein | - |
| C9E64_RS13330 () | 2581080..2581418 | - | 339 | WP_001416688.1 | peptidase S24 | - |
| C9E64_RS13335 () | 2581810..2582052 | + | 243 | WP_000747948.1 | hypothetical protein | - |
| C9E64_RS13340 () | 2582036..2582461 | + | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| C9E64_RS13345 () | 2582530..2583573 | + | 1044 | WP_001262402.1 | hypothetical protein | - |
| C9E64_RS13350 () | 2583566..2584027 | + | 462 | WP_000139447.1 | replication protein | - |
| C9E64_RS13355 () | 2584061..2584777 | + | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| C9E64_RS13360 () | 2584810..2585091 | + | 282 | WP_000603384.1 | DNA-binding protein | - |
| C9E64_RS13365 () | 2585088..2585315 | + | 228 | WP_000699809.1 | hypothetical protein | - |
| C9E64_RS13370 () | 2585308..2585619 | + | 312 | WP_001289673.1 | hypothetical protein | - |
| C9E64_RS13375 () | 2585747..2585965 | + | 219 | WP_000683609.1 | DUF4014 family protein | - |
| C9E64_RS13380 () | 2585967..2586524 | + | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| - () | 2586745..2586803 | - | 59 | - | - | Antitoxin Detail |
| C9E64_RS13385 () | 2586815..2586970 | + | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| C9E64_RS13390 () | 2587090..2587434 | + | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| C9E64_RS13395 () | 2587556..2587828 | + | 273 | WP_000191872.1 | hypothetical protein | - |
| C9E64_RS13400 () | 2587830..2588879 | + | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| C9E64_RS13405 () | 2588892..2589197 | + | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| C9E64_RS13410 () | 2589260..2589814 | + | 555 | WP_000640035.1 | DUF1133 family protein | - |
| C9E64_RS13415 () | 2590039..2590236 | + | 198 | WP_000917763.1 | hypothetical protein | - |
| C9E64_RS13420 () | 2590372..2591085 | + | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| C9E64_RS13435 () | 2591536..2591967 | + | 432 | WP_001302123.1 | tellurite resistance protein | - |
| C9E64_RS13440 () | 2591964..2592219 | + | 256 | Protein_2562 | DUF3927 family protein | - |
| C9E64_RS13445 () | 2592445..2594295 | + | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| C9E64_RS13450 () | 2594735..2594950 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| C9E64_RS13455 () | 2594955..2595299 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| C9E64_RS13460 () | 2595350..2595883 | + | 534 | WP_000992137.1 | lysozyme | - |
| C9E64_RS13465 () | 2596154..2596723 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| C9E64_RS13470 () | 2596723..2596869 | + | 147 | WP_000539795.1 | hypothetical protein | - |
| C9E64_RS13475 () | 2597092..2597277 | + | 186 | WP_001208680.1 | Rz1 family lipoprotein | - |
| C9E64_RS13480 () | 2597803..2598117 | + | 315 | WP_001302717.1 | PerC family transcriptional regulator | - |
| C9E64_RS13485 () | 2598199..2598423 | - | 225 | WP_001303940.1 | YlcI/YnfO family protein | - |
| C9E64_RS13495 () | 2598810..2599355 | + | 546 | WP_000867498.1 | terminase small subunit | - |
| C9E64_RS13500 () | 2599330..2601255 | + | 1926 | WP_024748469.1 | phage terminase large subunit family protein | - |
| C9E64_RS13505 () | 2601252..2601458 | + | 207 | WP_000198153.1 | gpW family protein | - |
| C9E64_RS13510 () | 2601455..2603056 | + | 1602 | WP_001301524.1 | phage portal protein | - |
| C9E64_RS13515 () | 2603037..2604356 | + | 1320 | WP_000123254.1 | S49 family peptidase | - |
| C9E64_RS13520 () | 2604366..2604698 | + | 333 | WP_001295978.1 | head decoration protein | - |
| C9E64_RS13525 () | 2604754..2605779 | + | 1026 | WP_024748468.1 | major capsid protein | - |
| C9E64_RS13530 () | 2605821..2606219 | + | 399 | WP_000158906.1 | DNA-packaging protein FI | - |
| C9E64_RS13535 () | 2606231..2606584 | + | 354 | WP_000753016.1 | head-tail joining protein | - |
| C9E64_RS13540 () | 2606599..2607132 | + | 534 | WP_000975020.1 | phage tail protein | - |
| C9E64_RS13545 () | 2607129..2607524 | + | 396 | WP_000683063.1 | phage minor tail U family protein | - |
| C9E64_RS13550 () | 2607532..2608284 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| C9E64_RS13555 () | 2608298..2608720 | + | 423 | WP_000479046.1 | phage minor tail protein G | - |
| C9E64_RS13560 () | 2608747..2609160 | + | 414 | WP_000533440.1 | phage tail assembly protein T | - |
| C9E64_RS13565 () | 2609141..2611753 | + | 2613 | WP_000081804.1 | phage tail tape measure protein | - |
| C9E64_RS13570 () | 2611750..2612079 | + | 330 | WP_000847298.1 | phage tail protein | - |
| C9E64_RS13575 () | 2612079..2612777 | + | 699 | WP_001151105.1 | phage minor tail protein L | - |
| C9E64_RS13580 () | 2612788..2613531 | + | 744 | WP_000194801.1 | C40 family peptidase | - |
| C9E64_RS13585 () | 2613477..2614109 | + | 633 | WP_129137391.1 | tail assembly protein | - |
| C9E64_RS13590 () | 2614356..2617835 | + | 3480 | WP_137097605.1 | host specificity protein J | - |
| C9E64_RS13595 () | 2617903..2618502 | + | 600 | WP_001230508.1 | hypothetical protein | VF |
| C9E64_RS13600 () | 2618567..2619880 | + | 1314 | WP_137049508.1 | ISNCY family transposase KIS | Transposase |
| C9E64_RS13605 () | 2619882..2620151 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| C9E64_RS13610 () | 2620265..2620840 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| C9E64_RS13615 () | 2620913..2621542 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| C9E64_RS13620 () | 2621624..2622265 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| C9E64_RS13630 () | 2622427..2622669 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| C9E64_RS13635 () | 2622801..2624084 | + | 1284 | Protein_2599 | MHS family MFS transporter YdfJ | - |
| C9E64_RS13640 () | 2624173..2625633 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| C9E64_RS13645 () | 2625669..2625872 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| C9E64_RS13650 () | 2626049..2626735 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| C9E64_RS13655 () | 2626824..2627570 | - | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|