MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92725 bp
Accession: NZ_CP028612 Location: 1..92725 Organism: Escherichia coli strain 142 Replicon: plasmid pTA142
Accession: NZ_CP028612 Location: 1..92725 Organism: Escherichia coli strain 142 Replicon: plasmid pTA142
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E66_RS28700 () | 13..870 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| C9E66_RS28715 () | 1782..2066 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| C9E66_RS28720 () | 2066..2341 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C9E66_RS28725 () | 2436..2642 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| C9E66_RS28730 () | 2742..2957 | - | 216 | Protein_5 | transposase | - |
| C9E66_RS28735 () | 3001..3567 | - | 567 | Protein_6 | IS3 family transposase ISSd1 | Transposase |
| C9E66_RS28740 () | 3567..3983 | - | 417 | Protein_7 | IS91 family transposase | - |
| C9E66_RS28745 () | 3983..4168 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| C9E66_RS28750 () | 4345..6555 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| C9E66_RS28755 () | 6599..6988 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| C9E66_RS28760 () | 7045..8033 | + | 989 | Protein_11 | IS3 family transposase IS629 | Transposase |
| C9E66_RS28770 () | 8214..12116 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| C9E66_RS28775 () | 12372..12853 | - | 482 | Protein_13 | IS1 family transposase IS1N | Transposase |
| C9E66_RS28785 () | 14294..15115 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| C9E66_RS28790 () | 15115..16221 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| C9E66_RS28795 () | 16311..18032 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| C9E66_RS28800 () | 18106..19104 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| C9E66_RS28805 () | 19157..19345 | + | 189 | Protein_18 | hypothetical protein | - |
| C9E66_RS28810 () | 19449..19535 | - | 87 | Protein_19 | IS3 family transposase ISEhe3 | Transposase |
| C9E66_RS28820 () | 19990..22686 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| C9E66_RS28825 () | 22773..23648 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| C9E66_RS28830 () | 23649..25616 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| C9E66_RS28835 () | 25616..27121 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| C9E66_RS28840 () | 27123..28346 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| C9E66_RS28845 () | 28377..28811 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| C9E66_RS28850 () | 28808..29362 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| C9E66_RS28855 () | 29377..29724 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| C9E66_RS28860 () | 29721..30320 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| C9E66_RS28865 () | 30317..31294 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| C9E66_RS28870 () | 31333..32505 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| C9E66_RS28875 () | 32492..33004 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| C9E66_RS28880 () | 33062..33895 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| C9E66_RS28885 () | 33987..34388 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| C9E66_RS28890 () | 34567..35738 | + | 1172 | Protein_34 | IS3 family transposase ISLad1 | Transposase |
| C9E66_RS28900 () | 36279..36794 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| C9E66_RS28905 () | 36796..39792 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| C9E66_RS28910 () | 39842..41962 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C9E66_RS28915 () | 41966..43405 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| C9E66_RS29480 () | 43526..44018 | + | 493 | Protein_39 | Transcriptional repressor MprA | VF |
| C9E66_RS28935 () | 44149..44379 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| C9E66_RS28940 () | 44500..45240 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| C9E66_RS28945 () | 45525..46502 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| C9E66_RS28955 () | 46910..47110 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| C9E66_RS28960 () | 47107..47727 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| C9E66_RS28965 () | 47724..48407 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| C9E66_RS28970 () | 48866..49084 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C9E66_RS28975 () | 49086..49391 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C9E66_RS28980 () | 49392..50198 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| C9E66_RS28995 () | 52096..52434 | + | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| C9E66_RS29000 () | 53022..54188 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| C9E66_RS29005 () | 54188..55159 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| C9E66_RS29030 () | 56459..58183 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| C9E66_RS29035 () | 58260..59162 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| C9E66_RS29040 () | 59166..59471 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| C9E66_RS29050 () | 59548..60231 | + | 684 | WP_000085945.1 | DNA methylase | - |
| C9E66_RS29055 () | 60232..60453 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| C9E66_RS29060 () | 60347..60901 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| C9E66_RS29485 () | 60947..61723 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| C9E66_RS29075 () | 62264..62566 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| C9E66_RS29080 () | 62613..63035 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| C9E66_RS29085 () | 63032..63223 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| C9E66_RS29490 () | 63193..63702 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| C9E66_RS29100 () | 64219..64449 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| C9E66_RS29105 () | 64501..65862 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| C9E66_RS29110 () | 65909..66472 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| C9E66_RS29115 () | 66558..67031 | - | 474 | WP_032338770.1 | hypothetical protein | - |
| C9E66_RS29120 () | 67101..67307 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| C9E66_RS29125 () | 67333..67785 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| C9E66_RS29130 () | 67842..68075 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| C9E66_RS29135 () | 68141..70099 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| C9E66_RS29140 () | 70154..70588 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| C9E66_RS29145 () | 70585..71346 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 71315..71513 | + | 199 | NuclAT_0 | - | - |
| - () | 71315..71513 | + | 199 | NuclAT_0 | - | - |
| - () | 71315..71513 | + | 199 | NuclAT_0 | - | - |
| - () | 71315..71513 | + | 199 | NuclAT_0 | - | - |
| C9E66_RS29150 () | 71578..71736 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| C9E66_RS29155 () | 71870..73891 | + | 2022 | Protein_75 | hypothetical protein | Relaxase |
| C9E66_RS29160 () | 73959..74390 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| C9E66_RS29170 () | 75041..75390 | - | 350 | Protein_77 | IS3 family transposase IS3H | Transposase |
| C9E66_RS29175 () | 75484..75747 | + | 264 | Protein_78 | IS21 family transposase ISEc62 | Transposase |
| C9E66_RS29180 () | 75787..75907 | + | 121 | Protein_79 | IS21 family transposase ISEc62 | Transposase |
| C9E66_RS29185 () | 75904..76056 | + | 153 | Protein_80 | IS1 family transposase | - |
| C9E66_RS29190 () | 76163..85672 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| C9E66_RS29195 () | 85746..85970 | + | 225 | Protein_82 | IS3 family transposase IS3H | Transposase |
| C9E66_RS29200 () | 86038..86208 | - | 171 | Protein_83 | IS3 family transposase IS1203 | Transposase |
| C9E66_RS29205 () | 86215..86466 | - | 252 | Protein_84 | IS3 family transposase IS1203 | Transposase |
| C9E66_RS29210 () | 86523..87911 | + | 1389 | Protein_85 | Multifunctional conjugation protein TraI | Relaxase |
| C9E66_RS29215 () | 87931..88677 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| C9E66_RS29220 () | 88736..89596 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| C9E66_RS29225 () | 89699..90259 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| C9E66_RS29230 () | 90392..90604 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| C9E66_RS29235 () | 90849..91310 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| C9E66_RS29240 () | 91356..91565 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| C9E66_RS29245 () | 91603..91941 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| C9E66_RS29250 () | 92181..92435 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|