MGE detailed information
MGE type: Genomic_island MGE length: 21219 bp
Accession: NZ_CP028592 Location: 4859317..4880535 Organism: Escherichia coli strain 150 Replicon: chromosome
Accession: NZ_CP028592 Location: 4859317..4880535 Organism: Escherichia coli strain 150 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E72_RS25175 () | 4855043..4855585 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| C9E72_RS25180 () | 4855878..4858028 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| C9E72_RS25185 () | 4858078..4858281 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| C9E72_RS25190 () | 4858292..4859248 | + | 957 | WP_001297640.1 | GTPase | - |
| C9E72_RS25195 () | 4859317..4860675 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| C9E72_RS25200 () | 4860684..4860968 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| C9E72_RS25205 () | 4861246..4863678 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| C9E72_RS25210 () | 4863745..4865214 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| C9E72_RS25215 () | 4865214..4866968 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4867118..4867194 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4867118..4867194 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4867118..4867194 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4867118..4867194 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4867118..4867194 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4867118..4867194 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4867118..4867194 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4867118..4867194 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| C9E72_RS25220 () | 4867189..4867530 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| C9E72_RS25225 () | 4867577..4868740 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| C9E72_RS25230 () | 4868788..4869669 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| C9E72_RS25235 () | 4869766..4869930 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| C9E72_RS25240 () | 4870107..4871519 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| C9E72_RS29520 () | 4871762..4871962 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| C9E72_RS25245 () | 4871967..4872719 | - | 753 | Protein_4812 | Recombination-promoting nuclease RpnD | VF |
| C9E72_RS25250 () | 4873186..4874418 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| C9E72_RS25255 () | 4874459..4875730 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| C9E72_RS25260 () | 4875846..4876997 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| C9E72_RS25265 () | 4877007..4877774 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| C9E72_RS25270 () | 4877771..4878037 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| C9E72_RS25275 () | 4878349..4880535 | + | 2187 | WP_000535053.1 | hypothetical protein | VF |
| C9E72_RS25285 () | 4880801..4881643 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| C9E72_RS25290 () | 4881711..4882889 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |