MGE detailed information
MGE type: Genomic_island MGE length: 85607 bp
Accession: NZ_CP028589 Location: 812288..897894 Organism: Escherichia coli strain WCHEC4533 Replicon: chromosome
Accession: NZ_CP028589 Location: 812288..897894 Organism: Escherichia coli strain WCHEC4533 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBR03_RS05815 () | 807567..807938 | + | 372 | WP_000820109.1 | type II secretion system minor pseudopilin GspI | - |
| DBR03_RS05820 () | 807935..808540 | + | 606 | WP_023147221.1 | type II secretion system minor pseudopilin GspJ | - |
| DBR03_RS05825 () | 808537..809514 | + | 978 | WP_000633200.1 | type II secretion system minor pseudopilin GspK | - |
| DBR03_RS05830 () | 809511..810689 | + | 1179 | WP_000094981.1 | type II secretion system protein GspL | - |
| DBR03_RS05835 () | 810691..811227 | + | 537 | WP_000942810.1 | GspM family type II secretion system protein YghD | - |
| DBR03_RS05840 () | 812288..813064 | + | 777 | WP_000124290.1 | Polysialic acid transport protein KpsM | VF |
| DBR03_RS05845 () | 813061..813738 | + | 678 | WP_087503488.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| DBR03_RS05850 () | 813947..815323 | + | 1377 | WP_012777785.1 | hypothetical protein | VF |
| DBR03_RS05855 () | 815341..816714 | + | 1374 | WP_000789018.1 | Bifunctional ribulose 5-phosphate reductase/CDP-ribitol pyrophosphorylase Bcs1 | VF |
| DBR03_RS05860 () | 817289..818428 | + | 1140 | WP_000069818.1 | hypothetical protein | VF |
| DBR03_RS05865 () | 818463..819422 | + | 960 | WP_000991482.1 | hypothetical protein | - |
| DBR03_RS05870 () | 819676..820908 | - | 1233 | WP_001153641.1 | hypothetical protein | VF |
| DBR03_RS05875 () | 820943..822970 | - | 2028 | WP_000579244.1 | hypothetical protein | VF |
| DBR03_RS05880 () | 822967..823707 | - | 741 | WP_000030740.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| DBR03_RS05885 () | 823717..825393 | - | 1677 | WP_012767757.1 | Polysialic acid transport protein KpsD | VF |
| DBR03_RS05890 () | 825417..826565 | - | 1149 | WP_000905931.1 | hypothetical protein | VF |
| DBR03_RS05895 () | 826637..827620 | - | 984 | WP_024181915.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| DBR03_RS05900 () | 828431..828601 | - | 171 | Protein_765 | IS110 family transposase | - |
| DBR03_RS05905 () | 829077..829403 | - | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DBR03_RS05910 () | 829400..829663 | - | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| DBR03_RS05915 () | 829735..830601 | - | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| DBR03_RS05920 () | 830686..830883 | - | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| DBR03_RS05925 () | 830895..831386 | - | 492 | WP_023155722.1 | hypothetical protein | - |
| DBR03_RS05930 () | 831383..831760 | - | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| DBR03_RS05935 () | 831807..832181 | - | 375 | WP_032153712.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| DBR03_RS05940 () | 832261..832482 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| DBR03_RS05945 () | 832551..833027 | - | 477 | WP_001186715.1 | RadC family protein | - |
| DBR03_RS05950 () | 833043..833528 | - | 486 | WP_032153711.1 | antirestriction protein | - |
| DBR03_RS05955 () | 833620..834438 | - | 819 | WP_001234693.1 | DUF945 domain-containing protein | - |
| DBR03_RS05960 () | 834529..834738 | - | 210 | WP_023155727.1 | DUF905 family protein | - |
| DBR03_RS05965 () | 834768..835445 | - | 678 | WP_023155728.1 | hypothetical protein | - |
| DBR03_RS05970 () | 835564..836448 | - | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| DBR03_RS05975 () | 836555..837487 | + | 933 | WP_023155730.1 | hypothetical protein | - |
| DBR03_RS05980 () | 837484..838293 | - | 810 | WP_032153709.1 | hypothetical protein | - |
| DBR03_RS05995 () | 840044..840775 | + | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| DBR03_RS06000 () | 840869..841526 | - | 658 | Protein_783 | transposase | - |
| DBR03_RS06005 () | 841960..843564 | + | 1605 | WP_001067608.1 | DUF3987 domain-containing protein | - |
| DBR03_RS06010 () | 845161..845727 | + | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| DBR03_RS26955 () | 845847..845996 | - | 150 | WP_001421645.1 | hypothetical protein | - |
| DBR03_RS06015 () | 846011..846583 | + | 573 | WP_032153703.1 | hypothetical protein | - |
| DBR03_RS06020 () | 846652..846888 | + | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| DBR03_RS06025 () | 847157..847705 | + | 549 | WP_032153702.1 | hypothetical protein | - |
| DBR03_RS06030 () | 847724..847972 | - | 249 | WP_001349534.1 | osmoprotectant transport activator ProQ | - |
| DBR03_RS06035 () | 848041..848232 | - | 192 | WP_001323513.1 | hypothetical protein | - |
| DBR03_RS06040 () | 848362..849590 | + | 1229 | WP_085959875.1 | IS3 family transposase IS2 | Transposase |
| DBR03_RS06050 () | 849971..850662 | - | 692 | Protein_793 | IS1 family transposase | - |
| DBR03_RS06055 () | 850722..850898 | + | 177 | Protein_794 | transketolase family protein | - |
| DBR03_RS06060 () | 851161..851274 | + | 114 | WP_131501864.1 | transposase | - |
| DBR03_RS06075 () | 852125..852691 | + | 567 | WP_000919994.1 | hypothetical protein | - |
| DBR03_RS06085 () | 852932..853747 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| DBR03_RS06090 () | 853808..854611 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| DBR03_RS06095 () | 854611..855447 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| DBR03_RS06105 () | 855753..855995 | + | 243 | WP_000844627.1 | transposase | - |
| DBR03_RS06110 () | 856027..856677 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| DBR03_RS06115 () | 856783..857982 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| DBR03_RS06120 () | 857949..858137 | - | 189 | Protein_803 | IS91 family transposase | - |
| DBR03_RS06125 () | 858249..858554 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| DBR03_RS06130 () | 858582..859796 | - | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| DBR03_RS06135 () | 860013..860897 | - | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| DBR03_RS06140 () | 860928..861584 | - | 657 | Protein_807 | IS91 family transposase ISVsa3 | Transposase |
| DBR03_RS06145 () | 861518..861796 | - | 279 | WP_001349530.1 | P fimbrial regulatory protein KS71A | VF |
| DBR03_RS06160 () | 862219..862533 | + | 315 | WP_000930062.1 | Major pilu subunit operon regulatory protein PapB | VF |
| DBR03_RS06165 () | 862740..863003 | + | 264 | Protein_810 | Pap fimbrial major pilin protein | VF |
| DBR03_RS06175 () | 863454..864686 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| DBR03_RS06180 () | 864837..865998 | - | 1162 | Protein_812 | IS3 family transposase IS3 | Transposase |
| DBR03_RS06185 () | 866166..867146 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| DBR03_RS06190 () | 867143..868087 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| DBR03_RS06195 () | 868090..869172 | - | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| DBR03_RS06205 () | 869639..869905 | + | 267 | WP_032153698.1 | MazG-like family protein | - |
| DBR03_RS06210 () | 870205..870719 | - | 515 | Protein_817 | ISL3 family transposase ISEc38 | Transposase |
| DBR03_RS06220 () | 871327..874740 | + | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| DBR03_RS06225 () | 874804..876438 | + | 1635 | WP_000627728.1 | type I restriction-modification system subunit M | - |
| DBR03_RS06230 () | 876435..877577 | + | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| DBR03_RS06235 () | 877586..879208 | + | 1623 | WP_000778955.1 | AAA family ATPase | - |
| DBR03_RS06240 () | 879208..880104 | + | 897 | WP_000499115.1 | hypothetical protein | - |
| DBR03_RS06245 () | 880327..880556 | - | 230 | Protein_823 | integrase | - |
| DBR03_RS06250 () | 880735..881472 | + | 738 | WP_001398114.1 | porin family protein | - |
| DBR03_RS06255 () | 881892..882788 | + | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| DBR03_RS06260 () | 882837..883916 | + | 1080 | WP_001207396.1 | hypothetical protein | - |
| DBR03_RS06265 () | 883963..885534 | + | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| DBR03_RS06270 () | 885531..885797 | + | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| DBR03_RS06275 () | 885937..886134 | + | 198 | WP_001238004.1 | hypothetical protein | - |
| DBR03_RS06285 () | 886187..887860 | + | 1674 | WP_025492097.1 | phosphoethanolamine transferase | - |
| DBR03_RS06290 () | 888004..889038 | - | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| DBR03_RS06295 () | 889088..889449 | + | 362 | Protein_832 | IS1 family transposase IS1A | Transposase |
| DBR03_RS26960 () | 889438..889725 | + | 288 | Protein_833 | transposase | - |
| DBR03_RS06305 () | 890303..891697 | - | 1395 | WP_001037798.1 | carbohydrate porin | - |
| DBR03_RS06310 () | 891892..893325 | - | 1434 | WP_024144973.1 | glycoside hydrolase family 32 protein | - |
| DBR03_RS06315 () | 893322..894599 | - | 1278 | WP_001083368.1 | MFS transporter | - |
| DBR03_RS06320 () | 894662..896788 | - | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| DBR03_RS06325 () | 896884..897894 | - | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| DBR03_RS06330 () | 898044..899228 | - | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| DBR03_RS06340 () | 899586..900293 | - | 708 | WP_000234533.1 | DUF554 domain-containing protein | - |
| DBR03_RS06345 () | 900686..902821 | + | 2136 | WP_000839790.1 | ornithine decarboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|