MGE detailed information
MGE type: Genomic_island MGE length: 16545 bp
Accession: NZ_CP028589 Location: 4323553..4340097 Organism: Escherichia coli strain WCHEC4533 Replicon: chromosome
Accession: NZ_CP028589 Location: 4323553..4340097 Organism: Escherichia coli strain WCHEC4533 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBR03_RS22995 () | 4320084..4320809 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| DBR03_RS23000 () | 4320846..4321385 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| DBR03_RS23005 () | 4321450..4321998 | - | 549 | WP_000695557.1 | type 1 fimbrial major subunit FimA | - |
| DBR03_RS23010 () | 4322479..4323075 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| DBR03_RS23015 () | 4323553..4324155 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| DBR03_RS23020 () | 4325611..4326327 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| DBR03_RS23025 () | 4326347..4327453 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| DBR03_RS23030 () | 4327518..4328498 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| DBR03_RS23035 () | 4329081..4330067 | - | 987 | WP_001323209.1 | hypothetical protein | - |
| DBR03_RS23040 () | 4330437..4330682 | + | 246 | Protein_4076 | GNAT family N-acetyltransferase | - |
| DBR03_RS23045 () | 4331059..4331316 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| DBR03_RS23050 () | 4331328..4331873 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| DBR03_RS23055 () | 4331929..4332675 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| DBR03_RS23060 () | 4332844..4333062 | + | 219 | Protein_4080 | hypothetical protein | - |
| DBR03_RS23065 () | 4333461..4334582 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| DBR03_RS23070 () | 4334579..4334857 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| DBR03_RS23075 () | 4334869..4336182 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| DBR03_RS23080 () | 4336195..4337001 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| DBR03_RS23085 () | 4337132..4337563 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| DBR03_RS23090 () | 4337575..4338207 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| DBR03_RS23095 () | 4338224..4339006 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| DBR03_RS23100 () | 4339309..4340097 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| DBR03_RS23105 () | 4340102..4341007 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| DBR03_RS23110 () | 4341018..4342985 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| DBR03_RS23115 () | 4343092..4344441 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|