NZ_CP0285431..159355

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 159355 bp
Accession: NZ_CP028543        Location: 1..159355         Organism: Klebsiella pneumoniae subsp. pneumoniae strain SCKP020143       Replicon: plasmid p1_020143


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CLQ46_RS00005 () 1..1011 + 1011 WP_004152063.1 RepB family plasmid replication initiator protein -
CLQ46_RS00010 () 1348..1545 - 198 WP_024144808.1 hypothetical protein -
CLQ46_RS00015 () 1728..2468 - 741 WP_001515717.1 tyrosine-type recombinase/integrase -
CLQ46_RS00020 () 3612..4559 + 948 WP_004152065.1 sensor domain-containing diguanylate cyclase -
CLQ46_RS00025 () 4586..4897 - 312 WP_071527918.1 EAL domain-containing protein -
CLQ46_RS00030 () 4884..4973 - 90 Protein_5 PTS fructose IIA subunit -
CLQ46_RS00035 () 4962..5885 + 924 WP_004152067.1 IS5 family transposase IS903B Transposase
CLQ46_RS00040 () 6558..6815 - 258 WP_004197688.1 hypothetical protein -
CLQ46_RS00045 () 7435..8871 + 1437 WP_080895248.1 putative cyclic di-GMP phosphodiesterase PdeB VF
CLQ46_RS00050 () 9854..11131 - 1278 WP_004152070.1 DUF2254 domain-containing protein -
CLQ46_RS00055 () 11194..13197 - 2004 WP_004152071.1 choline BCCT transporter BetT -
CLQ46_RS00060 () 13343..14040 - 698 Protein_11 IS1 family transposase IS1X2 Transposase
CLQ46_RS00065 () 14112..14204 + 93 Protein_12 PapC protein -
CLQ46_RS00075 () 15529..16013 + 485 Protein_14 IS1 family transposase IS1X2 Transposase
CLQ46_RS00080 () 16029..16571 + 543 Protein_15 ISL3 family transposase ISKpn25 Transposase
CLQ46_RS00085 () 16867..17298 - 432 WP_004178091.1 silver-binding protein SilE -
CLQ46_RS00090 () 17549..19024 - 1476 WP_003032875.1 copper/silver sensor histidine kinase SilS -
CLQ46_RS00095 () 19017..19697 - 681 WP_001572351.1 Transcriptional regulatory protein CusR VF
CLQ46_RS00100 () 19887..21272 + 1386 WP_000475512.1 Cation efflux system protein CusC VF
CLQ46_RS00105 () 21301..21654 + 354 WP_001246153.1 cation efflux system protein CusF -
CLQ46_RS00110 () 21768..23060 + 1293 WP_004152079.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
CLQ46_RS00115 () 23071..26217 + 3147 WP_004098958.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
CLQ46_RS00120 () 26304..26744 + 441 WP_000758228.1 hypothetical protein -
CLQ46_RS00125 () 26871..29318 + 2448 WP_004098955.1 Ag(+)-translocating P-type ATPase SilP -
CLQ46_RS00130 () 29359..29556 + 198 WP_000843497.1 DUF2933 domain-containing protein -
CLQ46_RS00135 () 29590..30327 - 738 WP_004118669.1 Murein DD-endopeptidase MepM VF
CLQ46_RS00140 () 30616..31065 - 450 WP_001023257.1 copper resistance protein -
CLQ46_RS00145 () 31299..33116 + 1818 WP_000925242.1 multicopper oxidase PcoA -
CLQ46_RS00150 () 33116..34012 + 897 WP_001242438.1 copper resistance outer membrane transporter PcoB -
CLQ46_RS00155 () 34052..34432 + 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
CLQ46_RS00160 () 34437..35366 + 930 WP_004118344.1 copper resistance inner membrane protein PcoD -
CLQ46_RS00165 () 35421..36101 + 681 WP_001188930.1 Transcriptional activator protein CopR VF
CLQ46_RS00170 () 36098..37498 + 1401 WP_004152084.1 copper resistance membrane spanning protein PcoS -
CLQ46_RS00175 () 37715..38149 + 435 WP_004152085.1 copper resistance system metallochaperone PcoE -
CLQ46_RS00180 () 38381..38560 - 180 WP_004152086.1 type II toxin-antitoxin system RelE/ParE family toxin -
CLQ46_RS00185 () 38621..40241 - 1621 Protein_36 ISL3 family transposase ISEc38 Transposase
CLQ46_RS00190 () 40303..40812 + 510 WP_031944101.1 aquaporin -
CLQ46_RS00195 () 40862..41359 - 498 WP_004152091.1 GNAT family N-acetyltransferase -
CLQ46_RS00200 () 41691..42017 + 327 WP_004152092.1 metalloregulator ArsR/SmtB family transcription factor -
CLQ46_RS00205 () 42017..42727 + 711 WP_085903505.1 arsenical resistance protein ArsH -
CLQ46_RS00210 () 42736..43281 + 546 WP_004182005.1 sigma-70 family RNA polymerase sigma factor -
CLQ46_RS00215 () 43357..43719 + 363 WP_004152095.1 arsenic metallochaperone ArsD family protein -
CLQ46_RS00220 () 43738..45494 + 1757 Protein_43 arsenical pump-driving ATPase -
CLQ46_RS00225 () 45616..46152 + 537 WP_004152096.1 GNAT family N-acetyltransferase -
CLQ46_RS00230 () 46185..46610 - 426 WP_004152097.1 glutaredoxin-dependent arsenate reductase -
CLQ46_RS00235 () 46623..47912 - 1290 WP_004152098.1 arsenite efflux transporter membrane subunit ArsB -
CLQ46_RS00240 () 47960..49711 - 1752 WP_004152099.1 Arsenical pump-driving ATPase VF
CLQ46_RS00245 () 49729..50091 - 363 WP_004152100.1 arsenite efflux transporter metallochaperone ArsD -
CLQ46_RS00250 () 50141..50491 - 351 WP_004152101.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
CLQ46_RS00255 () 50849..51118 + 270 WP_004152102.1 hypothetical protein -
CLQ46_RS00260 () 51106..51681 + 576 WP_004152103.1 hypothetical protein -
CLQ46_RS00265 () 51712..52206 + 495 WP_004152104.1 DNA-binding protein -
CLQ46_RS00270 () 52250..52618 + 369 WP_004152105.1 hypothetical protein -
CLQ46_RS00275 () 52652..52855 + 204 WP_004152106.1 hemolysin expression modulator Hha -
CLQ46_RS00280 () 52904..53161 + 258 WP_004152107.1 hypothetical protein -
CLQ46_RS00285 () 53237..53491 + 255 WP_004152108.1 hypothetical protein -
CLQ46_RS00290 () 53667..53933 + 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
CLQ46_RS00295 () 53921..54403 + 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
CLQ46_RS00300 () 54615..55961 + 1347 WP_020314316.1 ISNCY family transposase ISLad2 Transposase
CLQ46_RS00305 () 56462..57716 - 1255 Protein_60 IS3 family transposase ISKpn38 Transposase
CLQ46_RS00310 () 57804..58766 - 963 WP_004152113.1 M48 family metalloprotease -
CLQ46_RS00315 () 58753..59502 - 750 WP_085395420.1 phosphate-starvation-inducible PsiE family protein -
CLQ46_RS00320 () 59478..59690 - 213 Protein_63 sensor domain-containing diguanylate cyclase -
CLQ46_RS00325 () 59740..59937 - 198 WP_004152115.1 hypothetical protein -
CLQ46_RS00330 () 59937..62732 - 2796 WP_004152116.1 ATP-dependent Clp protease ATP-binding subunit ClpC VF
CLQ46_RS00335 () 62847..63416 - 570 WP_004152117.1 Spore protein SP21 VF
CLQ46_RS00340 () 63451..63732 - 282 WP_004152118.1 helix-turn-helix domain-containing protein -
CLQ46_RS00345 () 63928..64367 + 440 Protein_68 IS66 family insertion sequence hypothetical protein -
CLQ46_RS00350 () 64462..64578 + 117 Protein_69 hypothetical protein -
CLQ46_RS00355 () 64763..65460 + 698 Protein_70 IS1 family transposase IS1X3 Transposase
CLQ46_RS00360 () 65719..66699 + 981 WP_000019473.1 IS5 family transposase ISKpn26 Transposase
CLQ46_RS00365 () 66738..66824 - 87 WP_032188295.1 hypothetical protein -
CLQ46_RS00370 () 66876..67202 + 327 WP_004159231.1 hypothetical protein -
CLQ46_RS00375 () 67281..67800 - 520 Protein_74 IS5 family transposase ISPst7 Transposase
CLQ46_RS00380 () 68142..68969 + 828 WP_004153729.1 Glutamine transport ATP-binding protein GlnQ VF
CLQ46_RS00385 () 68966..69829 + 864 WP_004152695.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
CLQ46_RS00390 () 69838..70665 + 828 WP_004152694.1 phosphonate ABC transporter, permease protein PhnE -
CLQ46_RS00395 () 70674..71684 + 1011 WP_004152693.1 phosphonate dehydrogenase PtxD -
CLQ46_RS00400 () 71678..72547 + 870 WP_004152692.1 HTH-type transcriptional activator CmpR VF
CLQ46_RS00405 () 72655..72963 + 309 Protein_80 IS5 family transposase ISThi1 Transposase
CLQ46_RS00410 () 73169..73873 - 705 WP_004217321.1 IS6 family transposase IS26 Transposase
CLQ46_RS00415 () 73936..75129 + 1194 Protein_82 Tn3 family transposase TnpA_ISSba14 Transposase
CLQ46_RS00420 () 75208..76212 + 1005 WP_000427623.1 IS110 family transposase IS4321R Transposase
CLQ46_RS00425 () 76504..77172 + 669 WP_044117068.1 IS6 family transposase IS26 Transposase
CLQ46_RS00430 () 77224..77841 - 618 Protein_85 hypothetical protein -
CLQ46_RS00435 () 77892..78137 - 246 WP_001330846.1 hypothetical protein -
CLQ46_RS00440 () 78143..78334 + 192 WP_000951934.1 hypothetical protein -
CLQ46_RS00445 () 78816..79358 - 543 WP_000587837.1 AAA family ATPase -
CLQ46_RS00450 () 79371..80231 - 861 WP_000557454.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
CLQ46_RS00455 () 80269..80427 - 159 Protein_90 BA14K family protein -
CLQ46_RS00460 () 81055..82425 - 1371 WP_000971921.1 IS1182 family transposase ISCfr1 Transposase
CLQ46_RS00465 () 82540..83067 - 528 Protein_92 hypothetical protein -
CLQ46_RS00470 () 83131..83835 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CLQ46_RS00475 () 83781..84098 - 318 WP_108193582.1 transposase -
CLQ46_RS00480 () 84037..85050 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
CLQ46_RS00485 () 85195..85692 + 498 WP_001083725.1 Dihydrofolate reductase ARG
CLQ46_RS00490 () 85804..86094 + 291 WP_001336345.1 DUF1010 domain-containing protein -
CLQ46_RS00495 () 86100..86891 + 792 WP_001206356.1 Streptomycin 3''-adenylyltransferase ARG
CLQ46_RS00500 () 87055..87402 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
CLQ46_RS00505 () 87396..88235 + 840 WP_000259032.1 Dihydropteroate synthase ARG
CLQ46_RS00510 () 88165..88344 - 180 WP_031974050.1 hypothetical protein -
CLQ46_RS00515 () 88363..88863 + 501 WP_000376623.1 GNAT family N-acetyltransferase -
CLQ46_RS00520 () 89169..89282 - 114 WP_001297012.1 hypothetical protein -
CLQ46_RS00525 () 89370..90134 + 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
CLQ46_RS00530 () 90106..90192 - 87 Protein_105 glutathione S-transferase -
CLQ46_RS00535 () 90176..90340 + 165 Protein_106 resolvase -
CLQ46_RS00540 () 90475..91011 + 537 WP_019725122.1 Tn3 family transposase TnpR_TnShfr1 Transposase
CLQ46_RS00545 () 91023..91727 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CLQ46_RS00550 () 91794..93191 + 1398 WP_001535719.1 Methyl-accepting chemotaxis protein McpQ VF
CLQ46_RS00555 () 93730..96039 + 2310 WP_004152290.1 TerB N-terminal domain-containing protein -
CLQ46_RS00560 () 96043..97359 + 1317 WP_004152291.1 ATP-binding protein -
CLQ46_RS00565 () 97356..99551 + 2196 WP_000093087.1 DEAD/DEAH box helicase -
CLQ46_RS00570 () 100173..100361 + 189 WP_009486390.1 hypothetical protein -
CLQ46_RS00575 () 100505..100693 + 189 WP_024940886.1 hypothetical protein -
CLQ46_RS00580 () 100998..101855 - 858 WP_004152292.1 incFII family plasmid replication initiator RepA -
CLQ46_RS00585 () 101848..101925 - 78 WP_004171457.1 RepA leader peptide Tap -
CLQ46_RS00590 () 102142..102420 - 279 WP_004199332.1 replication regulatory protein RepA -
CLQ46_RS00595 () 102741..103292 - 552 WP_004152294.1 Phospholipase D VF
CLQ46_RS00600 () 103561..103839 - 279 WP_004152296.1 bacteriocin immunity protein -
CLQ46_RS00605 () 103841..106162 - 2322 WP_004178051.1 klebicin B-related nuclease bacteriocin -
CLQ46_RS00610 () 106519..107064 + 546 WP_004178052.1 hypothetical protein -
CLQ46_RS00615 () 107279..107626 - 348 WP_004152301.1 hypothetical protein -
CLQ46_RS00620 () 107646..108242 - 597 WP_004178053.1 fertility inhibition protein FinO -
CLQ46_RS00625 () 108400..109125 - 726 WP_004152303.1 type-F conjugative transfer system pilin acetylase TraX -
CLQ46_RS00630 () 109205..114466 - 5262 WP_004153029.1 Multifunctional conjugation protein TraI Relaxase
CLQ46_RS00635 () 114466..116775 - 2310 WP_004152630.1 type IV conjugative transfer system coupling protein TraD -
CLQ46_RS00640 () 117135..117866 - 732 WP_004152629.1 complement resistance protein TraT -
CLQ46_RS00645 () 118056..118583 - 528 WP_004153030.1 hypothetical protein -
CLQ46_RS00650 () 118589..121438 - 2850 WP_004178054.1 conjugal transfer mating pair stabilization protein TraG -
CLQ46_RS00655 () 121438..122808 - 1371 WP_004178055.1 conjugal transfer protein TraH -
CLQ46_RS00660 () 122795..123223 - 429 WP_004152689.1 hypothetical protein -
CLQ46_RS00665 () 123216..123788 - 573 WP_004152688.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
CLQ46_RS00670 () 123760..123999 - 240 WP_004152687.1 type-F conjugative transfer system pilin chaperone TraQ -
CLQ46_RS00675 () 124010..124762 - 753 WP_004152686.1 type-F conjugative transfer system pilin assembly protein TraF -
CLQ46_RS00680 () 124783..125109 - 327 WP_004152685.1 hypothetical protein -
CLQ46_RS00685 () 125155..125340 - 186 WP_004152684.1 hypothetical protein -
CLQ46_RS00690 () 125337..125573 - 237 WP_004152683.1 conjugal transfer protein TrbE -
CLQ46_RS00695 () 125605..127560 - 1956 WP_004153093.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
CLQ46_RS00700 () 127608..128246 - 639 WP_004152682.1 type-F conjugative transfer system pilin assembly protein TrbC -
CLQ46_RS00705 () 128259..129251 - 993 WP_004178057.1 conjugal transfer pilus assembly protein TraU -
CLQ46_RS00710 () 129262..129888 - 627 WP_004152590.1 type-F conjugative transfer system protein TraW -
CLQ46_RS00715 () 129888..130277 - 390 WP_004152591.1 type-F conjugative transfer system protein TrbI -
CLQ46_RS00720 () 130277..132916 - 2640 WP_004152592.1 type IV secretion system protein TraC -
CLQ46_RS00725 () 132988..133380 - 393 WP_004171485.1 hypothetical protein -
CLQ46_RS00730 () 133394..133685 - 292 Protein_145 hypothetical protein -
CLQ46_RS00735 () 133682..134086 - 405 WP_004152594.1 hypothetical protein -
CLQ46_RS00740 () 134153..134470 - 318 WP_004152595.1 hypothetical protein -
CLQ46_RS00745 () 134471..134689 - 219 WP_004171484.1 hypothetical protein -
CLQ46_RS00750 () 134713..135003 - 291 WP_004152596.1 hypothetical protein -
CLQ46_RS00755 () 135008..135418 - 411 WP_004152597.1 lipase chaperone -
CLQ46_RS00760 () 135550..136119 - 570 WP_004152598.1 type IV conjugative transfer system lipoprotein TraV -
CLQ46_RS00765 () 136142..136738 - 597 WP_004152599.1 conjugal transfer protein TraP -
CLQ46_RS00770 () 136731..138155 - 1425 WP_004152600.1 conjugal transfer protein TraB -
CLQ46_RS00775 () 138155..138895 - 741 WP_004152601.1 type-F conjugative transfer system secretin TraK -
CLQ46_RS00780 () 138882..139448 - 567 WP_004152602.1 type IV conjugative transfer system protein TraE -
CLQ46_RS00785 () 139468..139773 - 306 WP_004178059.1 type IV conjugative transfer system protein TraL -
CLQ46_RS00790 () 139787..140155 - 369 WP_004178060.1 type IV conjugative transfer system pilin TraA -
CLQ46_RS00795 () 140209..140580 - 372 WP_004208838.1 TraY domain-containing protein -
CLQ46_RS00800 () 140664..141350 - 687 WP_011977735.1 transcriptional regulator TraJ family protein -
CLQ46_RS00805 () 141573..141965 - 393 WP_004178062.1 relaxosome protein TraM -
CLQ46_RS00810 () 142399..142884 + 486 WP_004178063.1 hypothetical protein VF
CLQ46_RS00815 () 142917..143246 - 330 WP_011977736.1 hypothetical protein -
CLQ46_RS00820 () 143279..144100 - 822 WP_004178064.1 DUF945 domain-containing protein -
CLQ46_RS00825 () 144198..144416 + 219 WP_004153804.1 hypothetical protein -
CLQ46_RS00830 () 144714..144911 + 198 Protein_165 hypothetical protein -
CLQ46_RS00835 () 144823..145035 + 213 Protein_166 hypothetical protein -
CLQ46_RS00840 () 144934..145347 - 414 WP_004152722.1 helix-turn-helix domain-containing protein -
CLQ46_RS00845 () 145348..145626 - 279 WP_004152721.1 helix-turn-helix domain-containing protein -
CLQ46_RS00850 () 145616..145936 - 321 WP_004152720.1 type II toxin-antitoxin system RelE/ParE family toxin -
CLQ46_RS00855 () 146017..146241 - 225 WP_004152719.1 hypothetical protein -
CLQ46_RS00860 () 146252..146464 - 213 WP_004152718.1 hypothetical protein -
CLQ46_RS00865 () 146525..146881 - 357 WP_004152717.1 hypothetical protein -
CLQ46_RS00870 () 147006..147204 + 199 Protein_173 hypothetical protein -
CLQ46_RS00875 () 147676..147993 - 318 WP_004118473.1 hypothetical protein -
CLQ46_RS00880 () 148028..148282 - 255 WP_004152754.1 DNA polymerase III subunit theta -
CLQ46_RS00885 () 148519..148944 - 426 WP_004118478.1 antirestriction protein -
CLQ46_RS00890 () 148982..149203 + 222 WP_020956919.1 hypothetical protein -
CLQ46_RS00895 () 149128..149406 - 279 WP_072095260.1 hypothetical protein -
CLQ46_RS00900 () 149465..149695 - 231 WP_004152753.1 hypothetical protein -
CLQ46_RS00905 () 149929..151413 - 1485 WP_004152765.1 group II intron reverse transcriptase/maturase -
CLQ46_RS00910 () 151413..151664 - 252 WP_009483812.1 hypothetical protein -
CLQ46_RS00915 () 151819..152244 + 426 WP_004178083.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
CLQ46_RS00920 () 152244..153515 + 1272 WP_004152715.1 Y-family DNA polymerase -
CLQ46_RS00925 () 153594..153809 + 216 Protein_184 plasmid stabilization protein -
CLQ46_RS00930 () 153832..155030 - 1199 Protein_185 IS200-IS605 family transposase IS609 Transposase
CLQ46_RS00935 () 155244..155478 + 235 Protein_186 hypothetical protein -
CLQ46_RS00940 () 155505..156467 - 963 WP_004178084.1 hypothetical protein -
CLQ46_RS00945 () 156467..157438 - 972 WP_004152062.1 ParB/RepB/Spo0J family plasmid partition protein -
CLQ46_RS00950 () 157438..158604 - 1167 WP_000523813.1 Sporulation initiation inhibitor protein Soj VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance