MGE detailed information
MGE type: Genomic_island MGE length: 48968 bp
Accession: NZ_CP028483 Location: 3792111..3841078 Organism: Escherichia coli strain E41-1 Replicon: chromosome
Accession: NZ_CP028483 Location: 3792111..3841078 Organism: Escherichia coli strain E41-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U19_RS19785 () | 3788312..3788899 | + | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
| C2U19_RS19790 () | 3788913..3790385 | + | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| C2U19_RS19795 () | 3790399..3792069 | + | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| C2U19_RS19810 () | 3793154..3793717 | + | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| C2U19_RS19815 () | 3794047..3794841 | + | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| C2U19_RS19820 () | 3794995..3795756 | + | 762 | WP_001213045.1 | protein HyxA | - |
| C2U19_RS28095 () | 3795798..3796874 | + | 1077 | Protein_3644 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| C2U19_RS19830 () | 3796896..3798089 | + | 1194 | WP_072017408.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| C2U19_RS19835 () | 3798273..3798941 | + | 669 | WP_001005267.1 | membrane protein | - |
| C2U19_RS19850 () | 3799184..3799879 | - | 696 | WP_001295803.1 | lactate utilization protein C | - |
| C2U19_RS19855 () | 3799872..3801299 | - | 1428 | WP_001295802.1 | iron-sulfur cluster-binding protein | - |
| C2U19_RS19860 () | 3801310..3802029 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| C2U19_RS19865 () | 3802555..3803409 | - | 855 | WP_001295801.1 | DNA-binding transcriptional regulator RclR | - |
| C2U19_RS19870 () | 3803636..3804961 | + | 1326 | WP_001046304.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| C2U19_RS19875 () | 3805070..3805306 | + | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| C2U19_RS19880 () | 3805318..3805911 | + | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| C2U19_RS19885 () | 3806071..3806940 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| C2U19_RS19890 () | 3807188..3808045 | + | 858 | WP_000620995.1 | HTH-type transcriptional activator RhaR | VF |
| C2U19_RS19900 () | 3808170..3812417 | - | 4248 | WP_000092552.1 | hypothetical protein | VF |
| C2U19_RS19905 () | 3812983..3813834 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| C2U19_RS19910 () | 3813861..3814850 | + | 990 | WP_001172283.1 | aldo/keto reductase | - |
| C2U19_RS19915 () | 3814881..3815774 | - | 894 | WP_000910713.1 | HTH-type transcriptional regulator ArgP | VF |
| C2U19_RS19920 () | 3815974..3816900 | - | 927 | WP_001524125.1 | HTH-type transcriptional regulator ArgP | VF |
| C2U19_RS19925 () | 3817057..3817977 | + | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| C2U19_RS19930 () | 3818150..3819292 | + | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| C2U19_RS19935 () | 3819765..3819866 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| C2U19_RS19945 () | 3820231..3820506 | + | 276 | WP_110204495.1 | type B 50S ribosomal protein L31 | - |
| C2U19_RS19950 () | 3820493..3820633 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| C2U19_RS19955 () | 3820703..3820893 | - | 191 | Protein_3666 | hypothetical protein | - |
| C2U19_RS19970 () | 3821717..3822259 | + | 543 | WP_000389022.1 | hypothetical protein | VF |
| C2U19_RS19975 () | 3822334..3822921 | + | 588 | WP_000730982.1 | hypothetical protein | VF |
| C2U19_RS19980 () | 3822978..3823646 | + | 669 | WP_000716404.1 | hypothetical protein | VF |
| C2U19_RS19985 () | 3823672..3826197 | + | 2526 | WP_001131109.1 | hypothetical protein | VF |
| C2U19_RS19990 () | 3826187..3827830 | + | 1644 | WP_001265646.1 | hypothetical protein | VF |
| C2U19_RS19995 () | 3827799..3828509 | + | 711 | WP_001295798.1 | hypothetical protein | VF |
| C2U19_RS20000 () | 3828816..3829145 | + | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| C2U19_RS20005 () | 3829157..3829320 | - | 164 | Protein_3674 | tail fiber assembly protein | - |
| C2U19_RS20010 () | 3829394..3830008 | - | 615 | WP_001019923.1 | YagU family protein | - |
| C2U19_RS20015 () | 3830223..3830408 | - | 186 | WP_000146240.1 | hypothetical protein | - |
| C2U19_RS28100 () | 3830457..3830615 | + | 159 | Protein_3677 | integrase | - |
| C2U19_RS20025 () | 3830842..3831177 | + | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| C2U19_RS20030 () | 3831385..3832161 | + | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| C2U19_RS20035 () | 3832326..3833246 | - | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| C2U19_RS20040 () | 3833233..3834015 | - | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| C2U19_RS20045 () | 3834299..3837397 | + | 3099 | WP_000673070.1 | type I restriction endonuclease subunit R | - |
| C2U19_RS20050 () | 3837391..3839028 | + | 1638 | WP_000229741.1 | type I restriction-modification system subunit M | - |
| C2U19_RS20055 () | 3839018..3840265 | + | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| C2U19_RS28275 () | 3840445..3840630 | + | 186 | WP_101918754.1 | ash family protein | - |
| C2U19_RS20065 () | 3840608..3841078 | + | 471 | WP_000201175.1 | hypothetical protein | - |
| C2U19_RS28280 () | 3841224..3841427 | + | 204 | Protein_3687 | integrase | - |
| C2U19_RS20085 () | 3841632..3842885 | - | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| C2U19_RS20090 () | 3842897..3844000 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| C2U19_RS20095 () | 3844289..3845344 | + | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| C2U19_RS20100 () | 3845383..3845784 | - | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|