MGE detailed information
MGE type: Genomic_island MGE length: 9729 bp
Accession: NZ_CP028432 Location: 3801721..3811449 Organism: Escherichia coli strain RM9975 Replicon: chromosome
Accession: NZ_CP028432 Location: 3801721..3811449 Organism: Escherichia coli strain RM9975 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM9975_RS20355 () | 3797553..3798884 | - | 1332 | WP_000107714.1 | threonine/serine transporter TdcC | - |
| ECRM9975_RS20360 () | 3798906..3799895 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| ECRM9975_RS20370 () | 3799994..3800932 | - | 939 | WP_000104194.1 | transcriptional regulator TdcA | - |
| ECRM9975_RS29675 () | 3801247..3801465 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| ECRM9975_RS20380 () | 3801721..3802260 | + | 540 | WP_000675745.1 | hypothetical protein | - |
| ECRM9975_RS20385 () | 3802282..3803469 | + | 1188 | WP_000484556.1 | YhaC family protein | - |
| ECRM9975_RS20395 () | 3804273..3805418 | - | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| ECRM9975_RS20400 () | 3805515..3806405 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| ECRM9975_RS20405 () | 3806435..3807205 | - | 771 | WP_001058225.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| ECRM9975_RS20410 () | 3807221..3808555 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| ECRM9975_RS20415 () | 3808930..3810501 | + | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| ECRM9975_RS20420 () | 3810650..3810985 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| ECRM9975_RS20425 () | 3810985..3811449 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| ECRM9975_RS20430 () | 3811504..3812313 | - | 810 | WP_000072193.1 | aga operon transcriptional regulator AgaR | - |
| ECRM9975_RS20440 () | 3812562..3813842 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| ECRM9975_RS20445 () | 3813865..3814338 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| ECRM9975_RS20450 () | 3814349..3815128 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| ECRM9975_RS20455 () | 3815118..3815996 | + | 879 | WP_001341890.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| ECRM9975_RS20460 () | 3816014..3816448 | + | 435 | WP_000948822.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|