MGE detailed information
MGE type: Prophage MGE length: 67419 bp
Accession: NZ_CP028429 Location: 1341590..1409008 Organism: Escherichia coli strain RM9131 Replicon: chromosome
Accession: NZ_CP028429 Location: 1341590..1409008 Organism: Escherichia coli strain RM9131 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECRM9131_RS07025 () | 1337497..1338696 | + | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| ECRM9131_RS07030 () | 1338689..1339390 | + | 702 | WP_001033694.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| ECRM9131_RS07035 () | 1339390..1340634 | + | 1245 | WP_001251348.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| ECRM9131_RS07040 () | 1340663..1341574 | + | 912 | WP_000291270.1 | N-acetylglucosamine kinase | - |
| ECRM9131_RS07045 () | 1341590..1342411 | + | 822 | WP_000952736.1 | NAD-dependent protein deacylase | - |
| ECRM9131_RS07050 () | 1342550..1343338 | - | 789 | WP_000713472.1 | TPM domain-containing protein | - |
| ECRM9131_RS07055 () | 1343335..1343796 | - | 462 | WP_001341497.1 | DUF3592 domain-containing protein | - |
| ECRM9131_RS07060 () | 1343854..1344900 | - | 1047 | WP_000759338.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| ECRM9131_RS07065 () | 1344897..1345691 | - | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| ECRM9131_RS07070 () | 1345858..1346976 | - | 1119 | WP_000074981.1 | hypothetical protein ; Integrase | Integrase |
| ECRM9131_RS07075 () | 1346945..1347214 | - | 270 | WP_000003742.1 | excisionase | - |
| ECRM9131_RS07080 () | 1347276..1349741 | - | 2466 | WP_000048442.1 | exonuclease | - |
| ECRM9131_RS07085 () | 1349834..1350025 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| ECRM9131_RS07090 () | 1350022..1350210 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| ECRM9131_RS07100 () | 1350694..1350912 | - | 219 | WP_001171930.1 | hypothetical protein | - |
| ECRM9131_RS07105 () | 1350953..1351342 | - | 390 | WP_001447517.1 | hypothetical protein | - |
| ECRM9131_RS07115 () | 1351638..1351916 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ECRM9131_RS07120 () | 1351918..1352109 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| ECRM9131_RS07125 () | 1352130..1352501 | - | 372 | WP_001169687.1 | hypothetical protein | - |
| ECRM9131_RS07130 () | 1352599..1352901 | + | 303 | WP_001444689.1 | transcriptional regulator | - |
| ECRM9131_RS07135 () | 1352898..1353323 | + | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| ECRM9131_RS07140 () | 1353346..1354308 | + | 963 | WP_000095671.1 | helix-turn-helix domain-containing protein | - |
| ECRM9131_RS07145 () | 1354349..1354759 | + | 411 | Protein_1289 | DUF977 family protein | - |
| ECRM9131_RS07155 () | 1356531..1357109 | + | 579 | WP_001204666.1 | sce7726 family protein | - |
| ECRM9131_RS07160 () | 1357069..1358166 | - | 1098 | WP_000156210.1 | beta family protein | - |
| ECRM9131_RS07170 () | 1360052..1360192 | + | 141 | WP_072058819.1 | type I toxin-antitoxin system Hok family toxin | - |
| ECRM9131_RS07180 () | 1360360..1360632 | + | 273 | WP_012817871.1 | hypothetical protein | - |
| ECRM9131_RS07185 () | 1360634..1361689 | + | 1056 | WP_001369253.1 | DUF968 domain-containing protein | - |
| ECRM9131_RS07190 () | 1361690..1362055 | + | 366 | WP_000140024.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ECRM9131_RS07195 () | 1362064..1362594 | + | 531 | WP_000640048.1 | DUF1133 family protein | - |
| ECRM9131_RS29040 () | 1362836..1363033 | + | 198 | WP_000917750.1 | hypothetical protein | - |
| ECRM9131_RS07205 () | 1363184..1364242 | + | 1059 | WP_000935544.1 | site-specific DNA-methyltransferase | - |
| ECRM9131_RS07225 () | 1365039..1366889 | + | 1851 | WP_000874287.1 | DUF1737 domain-containing protein | - |
| ECRM9131_RS07235 () | 1367328..1367543 | + | 216 | WP_024164617.1 | class II holin family protein | - |
| ECRM9131_RS07240 () | 1367548..1367892 | + | 345 | WP_000731236.1 | YdfR family protein | - |
| ECRM9131_RS07245 () | 1367943..1368476 | + | 534 | WP_000992167.1 | lysozyme | - |
| ECRM9131_RS07250 () | 1368747..1369316 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| ECRM9131_RS29045 () | 1369316..1369462 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| ECRM9131_RS29055 () | 1369690..1369875 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| ECRM9131_RS07260 () | 1370300..1370527 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| ECRM9131_RS07265 () | 1370569..1370934 | + | 366 | WP_000279788.1 | HNH endonuclease | - |
| ECRM9131_RS07275 () | 1371225..1371788 | + | 564 | WP_000958415.1 | terminase small subunit | - |
| ECRM9131_RS07280 () | 1371785..1373446 | + | 1662 | WP_001369319.1 | terminase large subunit | - |
| ECRM9131_RS07285 () | 1373510..1375447 | + | 1938 | WP_000172984.1 | phage major capsid protein | - |
| ECRM9131_RS07290 () | 1375492..1375713 | + | 222 | WP_001063099.1 | hypothetical protein | - |
| ECRM9131_RS07295 () | 1375659..1378405 | + | 2747 | Protein_1314 | phage portal protein | - |
| ECRM9131_RS07300 () | 1378402..1378728 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| ECRM9131_RS07305 () | 1378738..1379088 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| ECRM9131_RS07310 () | 1379085..1379531 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| ECRM9131_RS07315 () | 1379528..1379872 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| ECRM9131_RS07320 () | 1379939..1380655 | + | 717 | WP_001275472.1 | tail protein | - |
| ECRM9131_RS07325 () | 1380661..1381035 | + | 375 | WP_001030042.1 | phage tail assembly chaperone | - |
| ECRM9131_RS07330 () | 1381131..1381340 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| ECRM9131_RS07335 () | 1381392..1384634 | + | 3243 | WP_000212932.1 | phage tail tape measure protein | - |
| ECRM9131_RS07340 () | 1384627..1384968 | + | 342 | WP_000807928.1 | phage tail protein | - |
| ECRM9131_RS07345 () | 1384968..1385666 | + | 699 | WP_001447444.1 | phage minor tail protein L | - |
| ECRM9131_RS07350 () | 1385683..1386003 | - | 321 | WP_001302649.1 | Arc family DNA-binding protein | - |
| ECRM9131_RS07355 () | 1386111..1386284 | + | 174 | WP_001154345.1 | Arc family DNA-binding protein | - |
| ECRM9131_RS07360 () | 1386355..1387277 | + | 923 | Protein_1327 | phage antirepressor Ant | - |
| ECRM9131_RS07365 () | 1387332..1388069 | + | 738 | WP_000967279.1 | C40 family peptidase | - |
| ECRM9131_RS07370 () | 1388015..1388647 | + | 633 | WP_122996286.1 | tail assembly protein | - |
| ECRM9131_RS07375 () | 1388884..1392363 | + | 3480 | WP_000514853.1 | host specificity protein J | - |
| ECRM9131_RS07380 () | 1392430..1393029 | + | 600 | WP_001230459.1 | hypothetical protein | VF |
| ECRM9131_RS07385 () | 1393094..1394416 | + | 1323 | WP_000268887.1 | ISNCY family transposase KIS | Transposase |
| ECRM9131_RS07390 () | 1394418..1394687 | + | 270 | WP_001023356.1 | phage tail fiber C-terminal domain-containing protein | - |
| ECRM9131_RS29060 () | 1394689..1394781 | + | 93 | Protein_1334 | tail assembly protein | - |
| ECRM9131_RS29065 () | 1394794..1394883 | + | 90 | WP_115801847.1 | hypothetical protein | - |
| ECRM9131_RS07395 () | 1394903..1397251 | + | 2349 | WP_001301673.1 | hypothetical protein | VF |
| ECRM9131_RS07400 () | 1397842..1401243 | + | 3402 | WP_001369471.1 | hypothetical protein | VF |
| ECRM9131_RS29385 () | 1401620..1401772 | - | 153 | Protein_1338 | IS256 family transposase ISSoEn2 | Transposase |
| ECRM9131_RS29390 () | 1401772..1401990 | + | 219 | Protein_1339 | IS256 family transposase ISSoEn2 | Transposase |
| ECRM9131_RS07410 () | 1402025..1402138 | + | 114 | Protein_1340 | non-LEE encoded effector protein NleB | - |
| ECRM9131_RS07415 () | 1402218..1402493 | - | 276 | WP_001303921.1 | hypothetical protein | - |
| ECRM9131_RS07420 () | 1402554..1403915 | - | 1362 | WP_000938117.1 | hypothetical protein | VF |
| ECRM9131_RS07430 () | 1404279..1405142 | - | 864 | WP_000799400.1 | spermidine/putrescine ABC transporter permease PotB | - |
| ECRM9131_RS07435 () | 1405126..1406262 | - | 1137 | WP_000531601.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| ECRM9131_RS07445 () | 1406512..1407741 | + | 1230 | WP_000359442.1 | peptidase T | - |
| ECRM9131_RS07450 () | 1407887..1409008 | - | 1122 | WP_000456506.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| ECRM9131_RS07455 () | 1409084..1410544 | - | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| ECRM9131_RS07460 () | 1410544..1411215 | - | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| ECRM9131_RS07465 () | 1411383..1412753 | - | 1371 | WP_000423729.1 | adenylosuccinate lyase | - |
| ECRM9131_RS07470 () | 1412757..1413398 | - | 642 | WP_001297479.1 | high frequency lysogenization protein HflD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|